Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_13675 and AO353_13680 are separated by 17 nucleotides AO353_13680 and AO353_13685 are separated by 48 nucleotides AO353_13685 and AO353_13690 are separated by 131 nucleotides
AO353_13675: AO353_13675 - acetyl-CoA carboxylase biotin carboxylase subunit, at 3,037,247 to 3,038,608
_13675
AO353_13680: AO353_13680 - acetyl-CoA carboxylase biotin carboxyl carrier protein subunit, at 3,038,626 to 3,039,090
_13680
AO353_13685: AO353_13685 - 3-dehydroquinate dehydratase, at 3,039,139 to 3,039,591
_13685
AO353_13690: AO353_13690 - thiol:disulfide interchange protein, at 3,039,723 to 3,041,486
_13690
Position (kb)
3039
3040 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3039.246 kb on - strand, within AO353_13685 at 3039.246 kb on - strand, within AO353_13685 at 3039.246 kb on - strand, within AO353_13685 at 3039.246 kb on - strand, within AO353_13685 at 3039.283 kb on - strand, within AO353_13685 at 3039.335 kb on - strand, within AO353_13685 at 3039.335 kb on - strand, within AO353_13685 at 3039.349 kb on - strand, within AO353_13685 at 3039.349 kb on - strand, within AO353_13685 at 3039.349 kb on - strand, within AO353_13685 at 3039.349 kb on - strand, within AO353_13685 at 3039.349 kb on - strand, within AO353_13685 at 3039.349 kb on - strand, within AO353_13685 at 3039.349 kb on - strand, within AO353_13685 at 3039.349 kb on - strand, within AO353_13685 at 3039.355 kb on - strand, within AO353_13685 at 3039.429 kb on - strand, within AO353_13685 at 3039.450 kb on - strand, within AO353_13685 at 3039.524 kb on + strand at 3039.607 kb on - strand at 3039.607 kb on - strand at 3039.620 kb on + strand at 3039.621 kb on - strand at 3039.621 kb on - strand at 3039.621 kb on - strand at 3039.676 kb on + strand at 3039.676 kb on + strand at 3039.676 kb on + strand at 3039.708 kb on + strand at 3039.743 kb on + strand at 3039.856 kb on + strand at 3039.856 kb on + strand at 3039.926 kb on + strand, within AO353_13690 at 3039.926 kb on + strand, within AO353_13690 at 3039.954 kb on - strand, within AO353_13690 at 3040.001 kb on - strand, within AO353_13690 at 3040.184 kb on - strand, within AO353_13690 at 3040.184 kb on - strand, within AO353_13690 at 3040.184 kb on - strand, within AO353_13690 at 3040.202 kb on - strand, within AO353_13690 at 3040.202 kb on - strand, within AO353_13690 at 3040.216 kb on - strand, within AO353_13690 at 3040.216 kb on - strand, within AO353_13690 at 3040.216 kb on - strand, within AO353_13690 at 3040.253 kb on + strand, within AO353_13690 at 3040.253 kb on + strand, within AO353_13690 at 3040.254 kb on - strand, within AO353_13690 at 3040.254 kb on - strand, within AO353_13690 at 3040.254 kb on - strand, within AO353_13690 at 3040.254 kb on - strand, within AO353_13690 at 3040.255 kb on + strand, within AO353_13690 at 3040.256 kb on - strand, within AO353_13690 at 3040.399 kb on + strand, within AO353_13690 at 3040.399 kb on + strand, within AO353_13690 at 3040.399 kb on + strand, within AO353_13690 at 3040.399 kb on + strand, within AO353_13690 at 3040.400 kb on - strand, within AO353_13690 at 3040.400 kb on - strand, within AO353_13690 at 3040.400 kb on - strand, within AO353_13690 at 3040.400 kb on - strand, within AO353_13690 at 3040.400 kb on - strand, within AO353_13690 at 3040.400 kb on - strand, within AO353_13690 at 3040.400 kb on - strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.530 kb on + strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.531 kb on - strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.532 kb on + strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.533 kb on - strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.534 kb on + strand, within AO353_13690 at 3040.535 kb on - strand, within AO353_13690 at 3040.535 kb on - strand, within AO353_13690 at 3040.535 kb on - strand, within AO353_13690 at 3040.535 kb on - strand, within AO353_13690 at 3040.535 kb on - strand, within AO353_13690 at 3040.535 kb on - strand, within AO353_13690 at 3040.535 kb on - strand, within AO353_13690 at 3040.535 kb on - strand, within AO353_13690 at 3040.563 kb on + strand, within AO353_13690 at 3040.563 kb on + strand, within AO353_13690 at 3040.563 kb on + strand, within AO353_13690 at 3040.563 kb on + strand, within AO353_13690 at 3040.564 kb on - strand, within AO353_13690 at 3040.564 kb on - strand, within AO353_13690 at 3040.564 kb on - strand, within AO353_13690
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 3,039,246 - AO353_13685 0.24 +0.4 3,039,246 - AO353_13685 0.24 -0.9 3,039,246 - AO353_13685 0.24 -0.7 3,039,246 - AO353_13685 0.24 -1.1 3,039,283 - AO353_13685 0.32 -1.6 3,039,335 - AO353_13685 0.43 -0.4 3,039,335 - AO353_13685 0.43 -2.5 3,039,349 - AO353_13685 0.46 -1.3 3,039,349 - AO353_13685 0.46 +0.0 3,039,349 - AO353_13685 0.46 -0.4 3,039,349 - AO353_13685 0.46 -1.9 3,039,349 - AO353_13685 0.46 -1.8 3,039,349 - AO353_13685 0.46 -1.6 3,039,349 - AO353_13685 0.46 -0.8 3,039,349 - AO353_13685 0.46 -0.6 3,039,355 - AO353_13685 0.48 -0.9 3,039,429 - AO353_13685 0.64 +0.5 3,039,450 - AO353_13685 0.69 -1.1 3,039,524 + +0.6 3,039,607 - -1.4 3,039,607 - +0.5 3,039,620 + +1.1 3,039,621 - -0.6 3,039,621 - -2.3 3,039,621 - -0.1 3,039,676 + +1.5 3,039,676 + -1.5 3,039,676 + -1.0 3,039,708 + -0.3 3,039,743 + -0.3 3,039,856 + -0.9 3,039,856 + -1.1 3,039,926 + AO353_13690 0.12 +0.5 3,039,926 + AO353_13690 0.12 -0.4 3,039,954 - AO353_13690 0.13 +0.7 3,040,001 - AO353_13690 0.16 +0.9 3,040,184 - AO353_13690 0.26 -1.4 3,040,184 - AO353_13690 0.26 -0.9 3,040,184 - AO353_13690 0.26 -0.4 3,040,202 - AO353_13690 0.27 -0.3 3,040,202 - AO353_13690 0.27 -0.1 3,040,216 - AO353_13690 0.28 +0.5 3,040,216 - AO353_13690 0.28 -0.4 3,040,216 - AO353_13690 0.28 -1.4 3,040,253 + AO353_13690 0.30 -0.9 3,040,253 + AO353_13690 0.30 -0.1 3,040,254 - AO353_13690 0.30 -0.1 3,040,254 - AO353_13690 0.30 +0.8 3,040,254 - AO353_13690 0.30 +0.5 3,040,254 - AO353_13690 0.30 -1.1 3,040,255 + AO353_13690 0.30 -0.8 3,040,256 - AO353_13690 0.30 -1.4 3,040,399 + AO353_13690 0.38 +0.6 3,040,399 + AO353_13690 0.38 -0.3 3,040,399 + AO353_13690 0.38 +1.6 3,040,399 + AO353_13690 0.38 -0.1 3,040,400 - AO353_13690 0.38 +1.1 3,040,400 - AO353_13690 0.38 -0.3 3,040,400 - AO353_13690 0.38 +0.5 3,040,400 - AO353_13690 0.38 -0.9 3,040,400 - AO353_13690 0.38 +1.4 3,040,400 - AO353_13690 0.38 +0.3 3,040,400 - AO353_13690 0.38 -0.1 3,040,530 + AO353_13690 0.46 +0.1 3,040,530 + AO353_13690 0.46 +1.0 3,040,530 + AO353_13690 0.46 -0.7 3,040,530 + AO353_13690 0.46 -0.4 3,040,530 + AO353_13690 0.46 -1.0 3,040,530 + AO353_13690 0.46 -1.3 3,040,530 + AO353_13690 0.46 +0.4 3,040,530 + AO353_13690 0.46 +0.4 3,040,530 + AO353_13690 0.46 +1.3 3,040,530 + AO353_13690 0.46 +0.1 3,040,530 + AO353_13690 0.46 -1.5 3,040,530 + AO353_13690 0.46 -0.4 3,040,530 + AO353_13690 0.46 +0.3 3,040,531 - AO353_13690 0.46 -0.3 3,040,531 - AO353_13690 0.46 +0.2 3,040,531 - AO353_13690 0.46 +1.5 3,040,531 - AO353_13690 0.46 -0.5 3,040,531 - AO353_13690 0.46 +0.1 3,040,531 - AO353_13690 0.46 -1.4 3,040,531 - AO353_13690 0.46 -0.2 3,040,531 - AO353_13690 0.46 -0.8 3,040,531 - AO353_13690 0.46 -0.6 3,040,531 - AO353_13690 0.46 -1.9 3,040,531 - AO353_13690 0.46 +0.4 3,040,531 - AO353_13690 0.46 -1.5 3,040,532 + AO353_13690 0.46 -0.4 3,040,532 + AO353_13690 0.46 +0.4 3,040,532 + AO353_13690 0.46 +0.6 3,040,532 + AO353_13690 0.46 -0.1 3,040,532 + AO353_13690 0.46 +0.0 3,040,532 + AO353_13690 0.46 +0.5 3,040,532 + AO353_13690 0.46 +0.7 3,040,532 + AO353_13690 0.46 -1.0 3,040,532 + AO353_13690 0.46 +0.5 3,040,532 + AO353_13690 0.46 -0.5 3,040,532 + AO353_13690 0.46 -0.5 3,040,532 + AO353_13690 0.46 -1.1 3,040,532 + AO353_13690 0.46 +1.2 3,040,532 + AO353_13690 0.46 -0.6 3,040,532 + AO353_13690 0.46 +0.0 3,040,533 - AO353_13690 0.46 -1.1 3,040,533 - AO353_13690 0.46 -1.4 3,040,533 - AO353_13690 0.46 +0.2 3,040,533 - AO353_13690 0.46 +0.1 3,040,533 - AO353_13690 0.46 +1.0 3,040,533 - AO353_13690 0.46 -1.9 3,040,533 - AO353_13690 0.46 +0.2 3,040,533 - AO353_13690 0.46 +0.4 3,040,533 - AO353_13690 0.46 -0.7 3,040,533 - AO353_13690 0.46 +1.8 3,040,533 - AO353_13690 0.46 +1.1 3,040,533 - AO353_13690 0.46 +0.9 3,040,533 - AO353_13690 0.46 +1.2 3,040,533 - AO353_13690 0.46 +1.4 3,040,533 - AO353_13690 0.46 -0.1 3,040,533 - AO353_13690 0.46 -0.6 3,040,533 - AO353_13690 0.46 +0.5 3,040,533 - AO353_13690 0.46 -0.9 3,040,533 - AO353_13690 0.46 +0.5 3,040,534 + AO353_13690 0.46 -0.8 3,040,534 + AO353_13690 0.46 +1.0 3,040,534 + AO353_13690 0.46 +0.0 3,040,534 + AO353_13690 0.46 +0.4 3,040,534 + AO353_13690 0.46 -1.8 3,040,534 + AO353_13690 0.46 -0.7 3,040,534 + AO353_13690 0.46 +1.1 3,040,534 + AO353_13690 0.46 -1.2 3,040,534 + AO353_13690 0.46 -0.3 3,040,534 + AO353_13690 0.46 -0.5 3,040,534 + AO353_13690 0.46 +0.3 3,040,534 + AO353_13690 0.46 +1.2 3,040,534 + AO353_13690 0.46 +1.6 3,040,534 + AO353_13690 0.46 +0.2 3,040,535 - AO353_13690 0.46 -0.7 3,040,535 - AO353_13690 0.46 -1.1 3,040,535 - AO353_13690 0.46 +0.6 3,040,535 - AO353_13690 0.46 -0.5 3,040,535 - AO353_13690 0.46 -0.2 3,040,535 - AO353_13690 0.46 -0.2 3,040,535 - AO353_13690 0.46 -2.4 3,040,535 - AO353_13690 0.46 -1.3 3,040,563 + AO353_13690 0.48 +0.5 3,040,563 + AO353_13690 0.48 -0.9 3,040,563 + AO353_13690 0.48 -1.6 3,040,563 + AO353_13690 0.48 -1.7 3,040,564 - AO353_13690 0.48 +1.4 3,040,564 - AO353_13690 0.48 -0.1 3,040,564 - AO353_13690 0.48 +0.3
Or see this region's nucleotide sequence