Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_12070 and AO353_12075 overlap by 1 nucleotides AO353_12075 and AO353_12080 overlap by 1 nucleotides AO353_12080 and AO353_12085 are separated by 42 nucleotides AO353_12085 and AO353_12090 are separated by 9 nucleotides AO353_12090 and AO353_12095 are separated by 66 nucleotides
AO353_12070: AO353_12070 - imidazoleglycerol-phosphate dehydratase, at 2,654,347 to 2,654,940
_12070
AO353_12075: AO353_12075 - imidazole glycerol phosphate synthase subunit HisH, at 2,654,940 to 2,655,578
_12075
AO353_12080: AO353_12080 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, at 2,655,578 to 2,655,835
_12080
AO353_12085: AO353_12085 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) , at 2,655,878 to 2,656,615
_12085
AO353_12090: AO353_12090 - imidazole glycerol phosphate synthase subunit HisF, at 2,656,625 to 2,657,395
_12090
AO353_12095: AO353_12095 - amino acid ABC transporter substrate-binding protein, at 2,657,462 to 2,658,217
_12095
Position (kb)
2655
2656
2657 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2654.938 kb on + strand at 2654.938 kb on + strand at 2654.938 kb on + strand at 2654.938 kb on + strand at 2655.387 kb on + strand, within AO353_12075 at 2655.387 kb on + strand, within AO353_12075 at 2655.387 kb on + strand, within AO353_12075 at 2655.388 kb on - strand, within AO353_12075 at 2655.388 kb on - strand, within AO353_12075 at 2655.388 kb on - strand, within AO353_12075 at 2655.388 kb on - strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.402 kb on + strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.403 kb on - strand, within AO353_12075 at 2655.405 kb on + strand, within AO353_12075 at 2655.405 kb on + strand, within AO353_12075 at 2655.405 kb on + strand, within AO353_12075 at 2655.405 kb on + strand, within AO353_12075 at 2655.405 kb on + strand, within AO353_12075 at 2655.405 kb on + strand, within AO353_12075 at 2655.405 kb on + strand, within AO353_12075 at 2655.405 kb on + strand, within AO353_12075 at 2655.406 kb on - strand, within AO353_12075 at 2655.406 kb on - strand, within AO353_12075 at 2655.406 kb on - strand, within AO353_12075 at 2655.406 kb on - strand, within AO353_12075 at 2655.406 kb on - strand, within AO353_12075 at 2655.451 kb on - strand, within AO353_12075 at 2655.743 kb on + strand, within AO353_12080 at 2655.743 kb on + strand, within AO353_12080 at 2655.743 kb on + strand, within AO353_12080 at 2655.746 kb on + strand, within AO353_12080 at 2655.746 kb on + strand, within AO353_12080 at 2655.746 kb on + strand, within AO353_12080 at 2655.746 kb on + strand, within AO353_12080 at 2655.746 kb on + strand, within AO353_12080 at 2655.746 kb on + strand, within AO353_12080 at 2655.746 kb on + strand, within AO353_12080 at 2655.746 kb on + strand, within AO353_12080 at 2655.747 kb on - strand, within AO353_12080 at 2655.747 kb on - strand, within AO353_12080 at 2655.747 kb on - strand, within AO353_12080 at 2655.747 kb on - strand at 2655.747 kb on - strand, within AO353_12080 at 2655.747 kb on - strand, within AO353_12080 at 2655.747 kb on - strand, within AO353_12080 at 2655.747 kb on - strand, within AO353_12080 at 2655.864 kb on + strand at 2655.865 kb on - strand at 2655.886 kb on + strand at 2655.887 kb on - strand at 2655.887 kb on - strand at 2655.887 kb on - strand at 2655.887 kb on - strand at 2655.904 kb on + strand at 2655.904 kb on + strand at 2655.904 kb on + strand at 2655.904 kb on + strand at 2656.154 kb on + strand, within AO353_12085 at 2656.154 kb on + strand, within AO353_12085 at 2656.154 kb on + strand, within AO353_12085 at 2656.154 kb on + strand, within AO353_12085 at 2656.154 kb on + strand, within AO353_12085 at 2656.154 kb on + strand, within AO353_12085 at 2656.155 kb on - strand, within AO353_12085 at 2656.155 kb on - strand, within AO353_12085 at 2656.155 kb on - strand, within AO353_12085 at 2656.175 kb on + strand, within AO353_12085 at 2656.175 kb on + strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.176 kb on - strand, within AO353_12085 at 2656.252 kb on + strand, within AO353_12085 at 2656.373 kb on + strand, within AO353_12085 at 2656.373 kb on + strand, within AO353_12085 at 2656.373 kb on + strand, within AO353_12085 at 2656.373 kb on + strand, within AO353_12085 at 2656.373 kb on + strand, within AO353_12085 at 2656.373 kb on + strand, within AO353_12085 at 2656.374 kb on - strand, within AO353_12085 at 2656.374 kb on - strand, within AO353_12085 at 2656.421 kb on + strand, within AO353_12085 at 2656.421 kb on + strand, within AO353_12085 at 2656.421 kb on + strand, within AO353_12085 at 2656.421 kb on + strand, within AO353_12085 at 2656.422 kb on - strand, within AO353_12085 at 2656.422 kb on - strand, within AO353_12085 at 2656.422 kb on - strand, within AO353_12085 at 2656.556 kb on + strand at 2656.557 kb on - strand at 2656.604 kb on + strand at 2656.604 kb on + strand at 2656.604 kb on + strand at 2656.604 kb on + strand at 2656.604 kb on + strand at 2656.604 kb on + strand at 2656.605 kb on - strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.621 kb on + strand at 2656.622 kb on - strand at 2656.622 kb on - strand at 2656.622 kb on - strand at 2656.622 kb on - strand at 2656.622 kb on - strand at 2656.622 kb on - strand at 2656.768 kb on + strand, within AO353_12090 at 2656.769 kb on - strand, within AO353_12090 at 2656.769 kb on - strand, within AO353_12090 at 2656.769 kb on - strand, within AO353_12090 at 2656.769 kb on - strand, within AO353_12090 at 2657.086 kb on + strand, within AO353_12090 at 2657.339 kb on + strand at 2657.340 kb on - strand at 2657.363 kb on + strand at 2657.363 kb on + strand at 2657.363 kb on + strand at 2657.363 kb on + strand at 2657.363 kb on + strand at 2657.363 kb on + strand at 2657.364 kb on - strand at 2657.364 kb on - strand at 2657.364 kb on - strand at 2657.485 kb on - strand at 2657.503 kb on - strand at 2657.505 kb on + strand at 2657.505 kb on + strand at 2657.505 kb on + strand at 2657.506 kb on - strand at 2657.579 kb on + strand, within AO353_12095 at 2657.579 kb on + strand, within AO353_12095 at 2657.579 kb on + strand, within AO353_12095 at 2657.579 kb on + strand, within AO353_12095
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 2,654,938 + -1.0 2,654,938 + -1.0 2,654,938 + -0.5 2,654,938 + -2.5 2,655,387 + AO353_12075 0.70 -1.7 2,655,387 + AO353_12075 0.70 -0.9 2,655,387 + AO353_12075 0.70 +0.2 2,655,388 - AO353_12075 0.70 -0.9 2,655,388 - AO353_12075 0.70 -2.1 2,655,388 - AO353_12075 0.70 +0.2 2,655,388 - AO353_12075 0.70 +0.4 2,655,402 + AO353_12075 0.72 -0.5 2,655,402 + AO353_12075 0.72 +0.5 2,655,402 + AO353_12075 0.72 -1.8 2,655,402 + AO353_12075 0.72 -1.3 2,655,402 + AO353_12075 0.72 -2.0 2,655,402 + AO353_12075 0.72 -0.5 2,655,402 + AO353_12075 0.72 -3.0 2,655,402 + AO353_12075 0.72 -2.2 2,655,402 + AO353_12075 0.72 -1.8 2,655,402 + AO353_12075 0.72 -1.1 2,655,402 + AO353_12075 0.72 -1.4 2,655,402 + AO353_12075 0.72 +1.8 2,655,402 + AO353_12075 0.72 -0.8 2,655,402 + AO353_12075 0.72 -1.4 2,655,402 + AO353_12075 0.72 -2.1 2,655,402 + AO353_12075 0.72 -1.1 2,655,402 + AO353_12075 0.72 -2.9 2,655,402 + AO353_12075 0.72 +0.5 2,655,402 + AO353_12075 0.72 -0.4 2,655,403 - AO353_12075 0.72 -2.1 2,655,403 - AO353_12075 0.72 -2.4 2,655,403 - AO353_12075 0.72 -2.1 2,655,403 - AO353_12075 0.72 -1.9 2,655,403 - AO353_12075 0.72 -1.1 2,655,403 - AO353_12075 0.72 -0.6 2,655,403 - AO353_12075 0.72 -0.5 2,655,403 - AO353_12075 0.72 -1.0 2,655,403 - AO353_12075 0.72 +0.1 2,655,403 - AO353_12075 0.72 -2.3 2,655,403 - AO353_12075 0.72 -1.0 2,655,405 + AO353_12075 0.73 -0.9 2,655,405 + AO353_12075 0.73 -1.8 2,655,405 + AO353_12075 0.73 +0.2 2,655,405 + AO353_12075 0.73 -2.5 2,655,405 + AO353_12075 0.73 -0.9 2,655,405 + AO353_12075 0.73 -2.7 2,655,405 + AO353_12075 0.73 -2.7 2,655,405 + AO353_12075 0.73 -0.8 2,655,406 - AO353_12075 0.73 +0.1 2,655,406 - AO353_12075 0.73 -1.6 2,655,406 - AO353_12075 0.73 -2.4 2,655,406 - AO353_12075 0.73 -1.8 2,655,406 - AO353_12075 0.73 -2.1 2,655,451 - AO353_12075 0.80 -0.2 2,655,743 + AO353_12080 0.64 +0.5 2,655,743 + AO353_12080 0.64 +0.1 2,655,743 + AO353_12080 0.64 +0.1 2,655,746 + AO353_12080 0.65 -0.5 2,655,746 + AO353_12080 0.65 -0.9 2,655,746 + AO353_12080 0.65 -1.0 2,655,746 + AO353_12080 0.65 +0.8 2,655,746 + AO353_12080 0.65 -0.6 2,655,746 + AO353_12080 0.65 +0.6 2,655,746 + AO353_12080 0.65 +2.1 2,655,746 + AO353_12080 0.65 +0.0 2,655,747 - AO353_12080 0.66 -1.8 2,655,747 - AO353_12080 0.66 -2.1 2,655,747 - AO353_12080 0.66 -1.3 2,655,747 - +0.7 2,655,747 - AO353_12080 0.66 -1.8 2,655,747 - AO353_12080 0.66 -0.3 2,655,747 - AO353_12080 0.66 -3.7 2,655,747 - AO353_12080 0.66 +0.1 2,655,864 + +0.2 2,655,865 - -1.5 2,655,886 + -1.6 2,655,887 - +0.2 2,655,887 - -0.5 2,655,887 - -3.4 2,655,887 - -2.8 2,655,904 + -1.9 2,655,904 + -0.3 2,655,904 + -2.3 2,655,904 + -1.2 2,656,154 + AO353_12085 0.37 -3.5 2,656,154 + AO353_12085 0.37 -1.3 2,656,154 + AO353_12085 0.37 -2.5 2,656,154 + AO353_12085 0.37 -2.5 2,656,154 + AO353_12085 0.37 -0.8 2,656,154 + AO353_12085 0.37 -1.6 2,656,155 - AO353_12085 0.38 +0.2 2,656,155 - AO353_12085 0.38 -1.5 2,656,155 - AO353_12085 0.38 -0.4 2,656,175 + AO353_12085 0.40 -2.4 2,656,175 + AO353_12085 0.40 -0.9 2,656,176 - AO353_12085 0.40 -0.3 2,656,176 - AO353_12085 0.40 -0.4 2,656,176 - AO353_12085 0.40 -1.7 2,656,176 - AO353_12085 0.40 -2.2 2,656,176 - AO353_12085 0.40 -1.4 2,656,176 - AO353_12085 0.40 -2.3 2,656,176 - AO353_12085 0.40 -0.5 2,656,176 - AO353_12085 0.40 -2.7 2,656,176 - AO353_12085 0.40 -0.9 2,656,252 + AO353_12085 0.51 -1.5 2,656,373 + AO353_12085 0.67 -2.7 2,656,373 + AO353_12085 0.67 -1.9 2,656,373 + AO353_12085 0.67 -0.7 2,656,373 + AO353_12085 0.67 -1.5 2,656,373 + AO353_12085 0.67 -2.7 2,656,373 + AO353_12085 0.67 -2.6 2,656,374 - AO353_12085 0.67 -2.1 2,656,374 - AO353_12085 0.67 -0.9 2,656,421 + AO353_12085 0.74 -2.2 2,656,421 + AO353_12085 0.74 -0.9 2,656,421 + AO353_12085 0.74 -1.3 2,656,421 + AO353_12085 0.74 -1.3 2,656,422 - AO353_12085 0.74 -1.2 2,656,422 - AO353_12085 0.74 -1.7 2,656,422 - AO353_12085 0.74 -2.4 2,656,556 + -1.0 2,656,557 - -0.1 2,656,604 + +0.7 2,656,604 + -1.2 2,656,604 + +1.1 2,656,604 + -0.7 2,656,604 + -1.0 2,656,604 + +1.1 2,656,605 - -3.5 2,656,621 + -1.7 2,656,621 + -0.2 2,656,621 + -1.6 2,656,621 + -3.7 2,656,621 + -1.3 2,656,621 + -2.7 2,656,621 + -0.0 2,656,621 + +0.4 2,656,621 + -2.2 2,656,621 + -1.8 2,656,621 + -3.5 2,656,621 + -1.3 2,656,621 + +0.2 2,656,622 - -3.6 2,656,622 - +0.6 2,656,622 - -2.2 2,656,622 - +0.1 2,656,622 - -1.8 2,656,622 - -1.5 2,656,768 + AO353_12090 0.19 -0.1 2,656,769 - AO353_12090 0.19 -0.4 2,656,769 - AO353_12090 0.19 -0.5 2,656,769 - AO353_12090 0.19 -0.9 2,656,769 - AO353_12090 0.19 +0.2 2,657,086 + AO353_12090 0.60 -2.0 2,657,339 + -0.5 2,657,340 - +0.7 2,657,363 + +0.3 2,657,363 + -2.8 2,657,363 + -1.9 2,657,363 + -1.0 2,657,363 + -0.3 2,657,363 + -1.4 2,657,364 - +0.1 2,657,364 - -1.6 2,657,364 - -1.9 2,657,485 - +0.4 2,657,503 - -0.9 2,657,505 + -1.2 2,657,505 + +1.9 2,657,505 + -0.1 2,657,506 - +1.8 2,657,579 + AO353_12095 0.15 -0.4 2,657,579 + AO353_12095 0.15 +0.2 2,657,579 + AO353_12095 0.15 -0.4 2,657,579 + AO353_12095 0.15 -0.9
Or see this region's nucleotide sequence