Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_08010 and AO353_08015 are separated by 192 nucleotides AO353_08015 and AO353_08020 are separated by 87 nucleotides
AO353_08010: AO353_08010 - adenosylhomocysteinase, at 1,765,540 to 1,766,949
_08010
AO353_08015: AO353_08015 - 5,10-methylenetetrahydrofolate reductase, at 1,767,142 to 1,767,987
_08015
AO353_08020: AO353_08020 - hypothetical protein, at 1,768,075 to 1,769,157
_08020
Position (kb)
1767
1768 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 1766.950 kb on + strand at 1766.951 kb on - strand at 1766.987 kb on + strand at 1766.987 kb on + strand at 1766.987 kb on + strand at 1766.987 kb on + strand at 1766.987 kb on + strand at 1766.987 kb on + strand at 1766.987 kb on + strand at 1766.987 kb on + strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.988 kb on - strand at 1766.991 kb on + strand at 1766.991 kb on + strand at 1766.992 kb on - strand at 1766.992 kb on - strand at 1766.992 kb on - strand at 1766.992 kb on - strand at 1766.992 kb on - strand at 1767.004 kb on + strand at 1767.005 kb on - strand at 1767.005 kb on - strand at 1767.009 kb on + strand at 1767.009 kb on + strand at 1767.009 kb on + strand at 1767.010 kb on - strand at 1767.010 kb on - strand at 1767.092 kb on + strand at 1767.092 kb on + strand at 1767.092 kb on + strand at 1767.093 kb on - strand at 1767.093 kb on - strand at 1767.093 kb on - strand at 1767.093 kb on - strand at 1767.111 kb on - strand at 1767.119 kb on + strand at 1767.119 kb on + strand at 1767.119 kb on + strand at 1767.120 kb on - strand at 1767.120 kb on - strand at 1767.136 kb on - strand at 1767.141 kb on + strand at 1767.141 kb on + strand at 1767.141 kb on + strand at 1767.141 kb on + strand at 1767.141 kb on + strand at 1767.141 kb on + strand at 1767.141 kb on + strand at 1767.141 kb on + strand at 1767.142 kb on - strand at 1767.142 kb on - strand at 1767.142 kb on - strand at 1767.142 kb on - strand at 1767.238 kb on + strand, within AO353_08015 at 1767.238 kb on + strand, within AO353_08015 at 1767.238 kb on + strand, within AO353_08015 at 1767.238 kb on + strand, within AO353_08015 at 1767.239 kb on - strand, within AO353_08015 at 1767.239 kb on - strand, within AO353_08015 at 1767.239 kb on - strand, within AO353_08015 at 1767.239 kb on - strand, within AO353_08015 at 1767.239 kb on - strand, within AO353_08015 at 1767.265 kb on + strand, within AO353_08015 at 1767.265 kb on + strand, within AO353_08015 at 1767.265 kb on + strand, within AO353_08015 at 1767.265 kb on + strand, within AO353_08015 at 1767.266 kb on - strand, within AO353_08015 at 1767.403 kb on + strand, within AO353_08015 at 1767.403 kb on + strand, within AO353_08015 at 1767.403 kb on + strand, within AO353_08015 at 1767.403 kb on + strand, within AO353_08015 at 1767.404 kb on - strand, within AO353_08015 at 1767.404 kb on - strand, within AO353_08015 at 1767.404 kb on - strand, within AO353_08015 at 1767.404 kb on - strand, within AO353_08015 at 1767.652 kb on + strand, within AO353_08015 at 1767.653 kb on - strand, within AO353_08015 at 1767.673 kb on + strand, within AO353_08015 at 1767.673 kb on + strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.674 kb on - strand, within AO353_08015 at 1767.680 kb on - strand, within AO353_08015 at 1767.695 kb on + strand, within AO353_08015 at 1767.696 kb on - strand, within AO353_08015 at 1767.696 kb on - strand, within AO353_08015 at 1767.751 kb on + strand, within AO353_08015 at 1767.752 kb on - strand, within AO353_08015 at 1767.752 kb on - strand, within AO353_08015 at 1767.752 kb on - strand, within AO353_08015 at 1767.826 kb on + strand, within AO353_08015 at 1767.925 kb on + strand at 1767.925 kb on + strand at 1767.925 kb on + strand at 1767.925 kb on + strand at 1767.996 kb on + strand at 1767.996 kb on + strand at 1767.997 kb on - strand at 1767.997 kb on - strand at 1767.997 kb on - strand at 1767.997 kb on - strand at 1767.997 kb on - strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.072 kb on + strand at 1768.073 kb on - strand at 1768.073 kb on - strand at 1768.073 kb on - strand at 1768.073 kb on - strand at 1768.073 kb on - strand at 1768.073 kb on - strand at 1768.086 kb on + strand at 1768.086 kb on + strand at 1768.086 kb on + strand at 1768.086 kb on + strand at 1768.087 kb on - strand at 1768.087 kb on - strand at 1768.114 kb on + strand at 1768.114 kb on + strand at 1768.115 kb on - strand at 1768.115 kb on - strand at 1768.115 kb on - strand at 1768.115 kb on - strand at 1768.115 kb on - strand at 1768.115 kb on - strand at 1768.115 kb on - strand at 1768.123 kb on + strand at 1768.123 kb on + strand at 1768.123 kb on + strand at 1768.123 kb on + strand at 1768.124 kb on - strand at 1768.124 kb on - strand at 1768.138 kb on + strand at 1768.138 kb on + strand at 1768.138 kb on + strand at 1768.139 kb on - strand at 1768.139 kb on - strand at 1768.139 kb on - strand at 1768.139 kb on - strand at 1768.139 kb on - strand at 1768.316 kb on - strand, within AO353_08020 at 1768.392 kb on + strand, within AO353_08020 at 1768.392 kb on + strand, within AO353_08020 at 1768.393 kb on - strand, within AO353_08020 at 1768.393 kb on - strand, within AO353_08020 at 1768.393 kb on - strand, within AO353_08020 at 1768.393 kb on - strand, within AO353_08020 at 1768.475 kb on - strand, within AO353_08020 at 1768.520 kb on + strand, within AO353_08020 at 1768.520 kb on + strand, within AO353_08020 at 1768.520 kb on + strand, within AO353_08020 at 1768.520 kb on + strand, within AO353_08020 at 1768.520 kb on + strand, within AO353_08020 at 1768.520 kb on + strand, within AO353_08020 at 1768.521 kb on - strand, within AO353_08020 at 1768.521 kb on - strand, within AO353_08020 at 1768.660 kb on + strand, within AO353_08020 at 1768.660 kb on + strand, within AO353_08020 at 1768.660 kb on + strand, within AO353_08020 at 1768.660 kb on + strand, within AO353_08020 at 1768.661 kb on - strand, within AO353_08020 at 1768.661 kb on - strand, within AO353_08020 at 1768.661 kb on - strand, within AO353_08020 at 1768.661 kb on - strand, within AO353_08020 at 1768.661 kb on - strand, within AO353_08020 at 1768.661 kb on - strand, within AO353_08020 at 1768.661 kb on - strand, within AO353_08020 at 1768.663 kb on - strand, within AO353_08020 at 1768.663 kb on - strand, within AO353_08020 at 1768.663 kb on - strand, within AO353_08020 at 1768.663 kb on - strand, within AO353_08020 at 1768.741 kb on + strand, within AO353_08020 at 1768.741 kb on + strand, within AO353_08020 at 1768.741 kb on + strand, within AO353_08020 at 1768.741 kb on + strand, within AO353_08020 at 1768.742 kb on - strand, within AO353_08020 at 1768.890 kb on + strand, within AO353_08020 at 1768.890 kb on + strand, within AO353_08020 at 1768.948 kb on + strand, within AO353_08020 at 1768.949 kb on - strand, within AO353_08020 at 1768.949 kb on - strand, within AO353_08020
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 1,766,950 + -0.2 1,766,951 - +1.4 1,766,987 + +0.4 1,766,987 + +0.8 1,766,987 + -0.1 1,766,987 + -1.5 1,766,987 + +0.3 1,766,987 + -0.8 1,766,987 + -0.4 1,766,987 + +2.0 1,766,988 - +0.3 1,766,988 - -1.6 1,766,988 - -0.2 1,766,988 - -1.6 1,766,988 - -1.0 1,766,988 - -0.3 1,766,988 - +0.4 1,766,988 - -0.9 1,766,988 - -1.3 1,766,988 - -0.1 1,766,991 + -1.2 1,766,991 + +0.4 1,766,992 - +0.7 1,766,992 - -0.6 1,766,992 - -0.6 1,766,992 - -0.8 1,766,992 - +0.3 1,767,004 + -1.7 1,767,005 - -0.2 1,767,005 - +0.2 1,767,009 + -0.3 1,767,009 + -1.6 1,767,009 + -0.9 1,767,010 - -2.9 1,767,010 - -1.5 1,767,092 + -0.7 1,767,092 + +0.0 1,767,092 + -2.2 1,767,093 - -1.2 1,767,093 - -0.2 1,767,093 - +0.7 1,767,093 - +0.7 1,767,111 - -0.6 1,767,119 + -0.0 1,767,119 + +0.1 1,767,119 + -1.4 1,767,120 - +0.2 1,767,120 - -2.7 1,767,136 - +1.4 1,767,141 + -1.7 1,767,141 + -0.7 1,767,141 + -1.0 1,767,141 + -0.1 1,767,141 + -0.6 1,767,141 + -1.9 1,767,141 + -0.7 1,767,141 + -0.7 1,767,142 - -0.3 1,767,142 - -0.8 1,767,142 - -0.2 1,767,142 - -0.8 1,767,238 + AO353_08015 0.11 -0.6 1,767,238 + AO353_08015 0.11 -1.4 1,767,238 + AO353_08015 0.11 -0.7 1,767,238 + AO353_08015 0.11 +1.8 1,767,239 - AO353_08015 0.11 -1.2 1,767,239 - AO353_08015 0.11 -2.1 1,767,239 - AO353_08015 0.11 +0.2 1,767,239 - AO353_08015 0.11 -1.2 1,767,239 - AO353_08015 0.11 +1.0 1,767,265 + AO353_08015 0.15 -2.2 1,767,265 + AO353_08015 0.15 -0.2 1,767,265 + AO353_08015 0.15 -0.8 1,767,265 + AO353_08015 0.15 -0.2 1,767,266 - AO353_08015 0.15 -1.2 1,767,403 + AO353_08015 0.31 -0.3 1,767,403 + AO353_08015 0.31 -0.4 1,767,403 + AO353_08015 0.31 -0.3 1,767,403 + AO353_08015 0.31 -0.3 1,767,404 - AO353_08015 0.31 -1.9 1,767,404 - AO353_08015 0.31 -0.7 1,767,404 - AO353_08015 0.31 -0.4 1,767,404 - AO353_08015 0.31 -0.6 1,767,652 + AO353_08015 0.60 -2.0 1,767,653 - AO353_08015 0.60 -1.2 1,767,673 + AO353_08015 0.63 -1.4 1,767,673 + AO353_08015 0.63 -1.6 1,767,674 - AO353_08015 0.63 -0.3 1,767,674 - AO353_08015 0.63 -0.9 1,767,674 - AO353_08015 0.63 -0.6 1,767,674 - AO353_08015 0.63 -0.8 1,767,674 - AO353_08015 0.63 -2.6 1,767,674 - AO353_08015 0.63 +0.4 1,767,674 - AO353_08015 0.63 -0.4 1,767,674 - AO353_08015 0.63 -1.8 1,767,674 - AO353_08015 0.63 -0.6 1,767,674 - AO353_08015 0.63 -1.4 1,767,680 - AO353_08015 0.64 -1.6 1,767,695 + AO353_08015 0.65 -2.2 1,767,696 - AO353_08015 0.65 -1.6 1,767,696 - AO353_08015 0.65 -0.7 1,767,751 + AO353_08015 0.72 +1.4 1,767,752 - AO353_08015 0.72 -0.9 1,767,752 - AO353_08015 0.72 -1.1 1,767,752 - AO353_08015 0.72 -1.3 1,767,826 + AO353_08015 0.81 -1.0 1,767,925 + -0.2 1,767,925 + +0.2 1,767,925 + +0.8 1,767,925 + -1.6 1,767,996 + -0.4 1,767,996 + -0.7 1,767,997 - -1.7 1,767,997 - -0.4 1,767,997 - -0.4 1,767,997 - -0.3 1,767,997 - -0.5 1,768,072 + +0.4 1,768,072 + -0.6 1,768,072 + +1.6 1,768,072 + -1.2 1,768,072 + +0.5 1,768,072 + -0.4 1,768,072 + +1.6 1,768,072 + +0.5 1,768,072 + +1.4 1,768,072 + -1.9 1,768,072 + -0.0 1,768,072 + -0.1 1,768,072 + -0.3 1,768,072 + -0.7 1,768,073 - -0.4 1,768,073 - +0.0 1,768,073 - +0.4 1,768,073 - +0.4 1,768,073 - -1.0 1,768,073 - -0.0 1,768,086 + +0.0 1,768,086 + -0.9 1,768,086 + +2.6 1,768,086 + -1.3 1,768,087 - -0.5 1,768,087 - -0.6 1,768,114 + -0.2 1,768,114 + +0.5 1,768,115 - +0.9 1,768,115 - +0.3 1,768,115 - -0.2 1,768,115 - -1.3 1,768,115 - +0.1 1,768,115 - +3.0 1,768,115 - +1.0 1,768,123 + -0.3 1,768,123 + -0.2 1,768,123 + -1.5 1,768,123 + -0.3 1,768,124 - +0.6 1,768,124 - -2.2 1,768,138 + -0.3 1,768,138 + -0.1 1,768,138 + -0.3 1,768,139 - -0.1 1,768,139 - -0.5 1,768,139 - +1.2 1,768,139 - +0.7 1,768,139 - +0.2 1,768,316 - AO353_08020 0.22 -2.4 1,768,392 + AO353_08020 0.29 -0.1 1,768,392 + AO353_08020 0.29 +2.0 1,768,393 - AO353_08020 0.29 -0.8 1,768,393 - AO353_08020 0.29 -0.5 1,768,393 - AO353_08020 0.29 -0.7 1,768,393 - AO353_08020 0.29 -0.8 1,768,475 - AO353_08020 0.37 -0.2 1,768,520 + AO353_08020 0.41 +0.8 1,768,520 + AO353_08020 0.41 +0.1 1,768,520 + AO353_08020 0.41 -0.7 1,768,520 + AO353_08020 0.41 -0.7 1,768,520 + AO353_08020 0.41 -1.3 1,768,520 + AO353_08020 0.41 +1.7 1,768,521 - AO353_08020 0.41 -0.7 1,768,521 - AO353_08020 0.41 +0.6 1,768,660 + AO353_08020 0.54 -0.2 1,768,660 + AO353_08020 0.54 -0.7 1,768,660 + AO353_08020 0.54 -0.5 1,768,660 + AO353_08020 0.54 -0.9 1,768,661 - AO353_08020 0.54 +4.3 1,768,661 - AO353_08020 0.54 -0.1 1,768,661 - AO353_08020 0.54 -0.8 1,768,661 - AO353_08020 0.54 +1.3 1,768,661 - AO353_08020 0.54 +0.5 1,768,661 - AO353_08020 0.54 -0.7 1,768,661 - AO353_08020 0.54 -0.2 1,768,663 - AO353_08020 0.54 -0.7 1,768,663 - AO353_08020 0.54 +1.3 1,768,663 - AO353_08020 0.54 +0.0 1,768,663 - AO353_08020 0.54 -0.9 1,768,741 + AO353_08020 0.61 -0.1 1,768,741 + AO353_08020 0.61 +0.6 1,768,741 + AO353_08020 0.61 +0.3 1,768,741 + AO353_08020 0.61 -0.4 1,768,742 - AO353_08020 0.62 -0.5 1,768,890 + AO353_08020 0.75 +0.1 1,768,890 + AO353_08020 0.75 +0.0 1,768,948 + AO353_08020 0.81 -0.5 1,768,949 - AO353_08020 0.81 -0.2 1,768,949 - AO353_08020 0.81 -0.2
Or see this region's nucleotide sequence