Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_05410 and AO353_05415 are separated by 120 nucleotides AO353_05415 and AO353_05420 are separated by 339 nucleotides
AO353_05410: AO353_05410 - peptide ABC transporter ATP-binding protein, at 1,192,479 to 1,193,450
_05410
AO353_05415: AO353_05415 - hypothetical protein, at 1,193,571 to 1,193,801
_05415
AO353_05420: AO353_05420 - peptide chain release factor 3, at 1,194,141 to 1,195,724
_05420
Position (kb)
1193
1194 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1192.736 kb on + strand, within AO353_05410 at 1192.736 kb on + strand, within AO353_05410 at 1192.737 kb on - strand, within AO353_05410 at 1192.779 kb on + strand, within AO353_05410 at 1192.832 kb on - strand, within AO353_05410 at 1192.832 kb on - strand, within AO353_05410 at 1192.917 kb on + strand, within AO353_05410 at 1192.917 kb on + strand, within AO353_05410 at 1193.097 kb on + strand, within AO353_05410 at 1193.097 kb on + strand, within AO353_05410 at 1193.097 kb on + strand, within AO353_05410 at 1193.097 kb on + strand, within AO353_05410 at 1193.097 kb on + strand, within AO353_05410 at 1193.098 kb on - strand, within AO353_05410 at 1193.098 kb on - strand, within AO353_05410 at 1193.098 kb on - strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.101 kb on + strand, within AO353_05410 at 1193.102 kb on - strand, within AO353_05410 at 1193.160 kb on + strand, within AO353_05410 at 1193.160 kb on + strand, within AO353_05410 at 1193.160 kb on + strand, within AO353_05410 at 1193.161 kb on - strand, within AO353_05410 at 1193.161 kb on - strand, within AO353_05410 at 1193.161 kb on - strand, within AO353_05410 at 1193.161 kb on - strand, within AO353_05410 at 1193.161 kb on - strand, within AO353_05410 at 1193.161 kb on - strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.202 kb on + strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.203 kb on - strand, within AO353_05410 at 1193.223 kb on + strand, within AO353_05410 at 1193.224 kb on - strand, within AO353_05410 at 1193.224 kb on - strand, within AO353_05410 at 1193.224 kb on - strand, within AO353_05410 at 1193.448 kb on + strand at 1193.625 kb on - strand, within AO353_05415 at 1193.625 kb on - strand, within AO353_05415 at 1193.775 kb on + strand, within AO353_05415 at 1193.775 kb on + strand, within AO353_05415 at 1193.776 kb on - strand, within AO353_05415 at 1193.801 kb on + strand at 1193.802 kb on - strand at 1193.802 kb on - strand at 1193.802 kb on - strand at 1193.802 kb on - strand at 1193.802 kb on - strand at 1193.802 kb on - strand at 1193.802 kb on - strand at 1193.821 kb on + strand at 1193.822 kb on - strand at 1193.822 kb on - strand at 1193.822 kb on - strand at 1193.836 kb on + strand at 1193.836 kb on + strand at 1193.836 kb on + strand at 1193.836 kb on + strand at 1193.837 kb on - strand at 1193.837 kb on - strand at 1193.837 kb on - strand at 1193.837 kb on - strand at 1193.840 kb on + strand at 1193.841 kb on - strand at 1193.849 kb on + strand at 1193.849 kb on + strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.850 kb on - strand at 1193.864 kb on + strand at 1193.881 kb on + strand at 1193.882 kb on - strand at 1193.882 kb on - strand at 1193.890 kb on + strand at 1193.891 kb on - strand at 1193.891 kb on - strand at 1193.908 kb on + strand at 1193.908 kb on + strand at 1193.908 kb on + strand at 1193.908 kb on + strand at 1193.908 kb on + strand at 1193.908 kb on + strand at 1193.909 kb on - strand at 1193.909 kb on - strand at 1193.909 kb on - strand at 1193.909 kb on - strand at 1193.909 kb on - strand at 1193.917 kb on - strand at 1193.986 kb on - strand at 1193.986 kb on - strand at 1193.986 kb on - strand at 1193.986 kb on - strand at 1194.020 kb on + strand at 1194.020 kb on + strand at 1194.021 kb on - strand at 1194.037 kb on + strand at 1194.037 kb on + strand at 1194.037 kb on + strand at 1194.038 kb on - strand at 1194.038 kb on - strand at 1194.038 kb on - strand at 1194.056 kb on + strand at 1194.057 kb on - strand at 1194.057 kb on - strand at 1194.057 kb on - strand at 1194.057 kb on - strand at 1194.073 kb on + strand at 1194.073 kb on + strand at 1194.074 kb on - strand at 1194.074 kb on - strand at 1194.080 kb on + strand at 1194.080 kb on + strand at 1194.080 kb on + strand at 1194.080 kb on + strand at 1194.080 kb on + strand at 1194.080 kb on + strand at 1194.080 kb on + strand at 1194.080 kb on + strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.081 kb on - strand at 1194.135 kb on + strand at 1194.135 kb on + strand at 1194.135 kb on + strand at 1194.136 kb on - strand at 1194.142 kb on + strand at 1194.142 kb on + strand at 1194.142 kb on + strand at 1194.142 kb on + strand at 1194.143 kb on - strand at 1194.143 kb on - strand at 1194.143 kb on - strand at 1194.143 kb on - strand at 1194.364 kb on + strand, within AO353_05420 at 1194.365 kb on - strand, within AO353_05420 at 1194.776 kb on + strand, within AO353_05420
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 1,192,736 + AO353_05410 0.26 -2.1 1,192,736 + AO353_05410 0.26 -1.5 1,192,737 - AO353_05410 0.27 +1.2 1,192,779 + AO353_05410 0.31 -1.2 1,192,832 - AO353_05410 0.36 -1.3 1,192,832 - AO353_05410 0.36 -0.3 1,192,917 + AO353_05410 0.45 -1.2 1,192,917 + AO353_05410 0.45 -0.6 1,193,097 + AO353_05410 0.64 -1.2 1,193,097 + AO353_05410 0.64 -1.8 1,193,097 + AO353_05410 0.64 -0.9 1,193,097 + AO353_05410 0.64 +0.4 1,193,097 + AO353_05410 0.64 -2.8 1,193,098 - AO353_05410 0.64 -1.9 1,193,098 - AO353_05410 0.64 -1.1 1,193,098 - AO353_05410 0.64 -0.6 1,193,101 + AO353_05410 0.64 -0.2 1,193,101 + AO353_05410 0.64 -1.1 1,193,101 + AO353_05410 0.64 -1.5 1,193,101 + AO353_05410 0.64 -1.7 1,193,101 + AO353_05410 0.64 +1.8 1,193,101 + AO353_05410 0.64 +0.0 1,193,101 + AO353_05410 0.64 -1.7 1,193,101 + AO353_05410 0.64 -3.2 1,193,101 + AO353_05410 0.64 -0.6 1,193,101 + AO353_05410 0.64 -3.0 1,193,101 + AO353_05410 0.64 -1.0 1,193,101 + AO353_05410 0.64 -1.3 1,193,101 + AO353_05410 0.64 -1.8 1,193,101 + AO353_05410 0.64 -0.3 1,193,101 + +0.0 1,193,101 + AO353_05410 0.64 -2.4 1,193,101 + AO353_05410 0.64 -0.3 1,193,101 + AO353_05410 0.64 -1.4 1,193,101 + AO353_05410 0.64 -1.2 1,193,101 + AO353_05410 0.64 -1.6 1,193,101 + AO353_05410 0.64 -1.3 1,193,101 + AO353_05410 0.64 -2.0 1,193,101 + AO353_05410 0.64 -1.3 1,193,101 + AO353_05410 0.64 -2.5 1,193,101 + AO353_05410 0.64 -1.1 1,193,101 + AO353_05410 0.64 -0.8 1,193,101 + AO353_05410 0.64 -1.9 1,193,101 + AO353_05410 0.64 -2.5 1,193,101 + AO353_05410 0.64 -0.6 1,193,101 + AO353_05410 0.64 -1.8 1,193,101 + AO353_05410 0.64 +0.5 1,193,101 + AO353_05410 0.64 -3.4 1,193,101 + AO353_05410 0.64 -2.2 1,193,101 + AO353_05410 0.64 +0.5 1,193,102 - AO353_05410 0.64 -2.6 1,193,160 + AO353_05410 0.70 -1.3 1,193,160 + AO353_05410 0.70 -2.2 1,193,160 + AO353_05410 0.70 -1.7 1,193,161 - AO353_05410 0.70 -1.8 1,193,161 - AO353_05410 0.70 -3.2 1,193,161 - AO353_05410 0.70 -1.5 1,193,161 - AO353_05410 0.70 -1.8 1,193,161 - AO353_05410 0.70 -1.0 1,193,161 - AO353_05410 0.70 -0.4 1,193,202 + AO353_05410 0.74 +0.2 1,193,202 + AO353_05410 0.74 -1.6 1,193,202 + AO353_05410 0.74 -0.9 1,193,202 + AO353_05410 0.74 -2.1 1,193,202 + AO353_05410 0.74 -0.7 1,193,202 + AO353_05410 0.74 -1.1 1,193,202 + AO353_05410 0.74 -0.3 1,193,202 + AO353_05410 0.74 -2.3 1,193,202 + AO353_05410 0.74 -1.8 1,193,202 + AO353_05410 0.74 -1.6 1,193,202 + AO353_05410 0.74 -1.1 1,193,202 + AO353_05410 0.74 -2.6 1,193,202 + AO353_05410 0.74 -0.4 1,193,202 + AO353_05410 0.74 -1.2 1,193,203 - AO353_05410 0.74 -0.5 1,193,203 - AO353_05410 0.74 -1.3 1,193,203 - AO353_05410 0.74 -1.6 1,193,203 - AO353_05410 0.74 -0.9 1,193,203 - AO353_05410 0.74 -2.7 1,193,203 - AO353_05410 0.74 -1.3 1,193,203 - AO353_05410 0.74 -0.3 1,193,203 - AO353_05410 0.74 -3.3 1,193,203 - AO353_05410 0.74 -0.2 1,193,203 - AO353_05410 0.74 -2.3 1,193,203 - AO353_05410 0.74 -1.0 1,193,203 - AO353_05410 0.74 -1.5 1,193,203 - AO353_05410 0.74 -2.0 1,193,203 - AO353_05410 0.74 -2.5 1,193,223 + AO353_05410 0.77 -0.5 1,193,224 - AO353_05410 0.77 -0.7 1,193,224 - AO353_05410 0.77 -2.7 1,193,224 - AO353_05410 0.77 -1.0 1,193,448 + -0.8 1,193,625 - AO353_05415 0.23 -0.7 1,193,625 - AO353_05415 0.23 -1.1 1,193,775 + AO353_05415 0.88 -1.3 1,193,775 + AO353_05415 0.88 -0.1 1,193,776 - AO353_05415 0.89 -1.6 1,193,801 + -0.3 1,193,802 - +1.5 1,193,802 - +0.7 1,193,802 - -0.3 1,193,802 - +0.4 1,193,802 - +0.8 1,193,802 - -0.6 1,193,802 - -0.5 1,193,821 + -0.3 1,193,822 - -0.4 1,193,822 - -0.8 1,193,822 - -1.9 1,193,836 + +1.1 1,193,836 + +1.3 1,193,836 + +3.4 1,193,836 + +2.4 1,193,837 - -1.5 1,193,837 - +0.8 1,193,837 - -1.0 1,193,837 - -0.1 1,193,840 + +0.6 1,193,841 - -1.2 1,193,849 + -0.4 1,193,849 + -0.0 1,193,850 - +0.4 1,193,850 - -1.7 1,193,850 - +0.7 1,193,850 - +0.1 1,193,850 - -1.5 1,193,850 - +0.6 1,193,850 - +0.8 1,193,850 - -2.0 1,193,850 - +0.5 1,193,850 - -0.6 1,193,864 + +1.2 1,193,881 + +1.3 1,193,882 - +0.8 1,193,882 - -1.8 1,193,890 + +0.2 1,193,891 - +0.1 1,193,891 - +0.0 1,193,908 + -0.5 1,193,908 + -0.0 1,193,908 + -0.9 1,193,908 + -0.7 1,193,908 + +1.1 1,193,908 + +1.7 1,193,909 - -0.5 1,193,909 - -0.6 1,193,909 - +0.7 1,193,909 - +1.2 1,193,909 - -0.4 1,193,917 - +0.5 1,193,986 - -0.4 1,193,986 - +0.3 1,193,986 - -0.0 1,193,986 - -1.0 1,194,020 + +0.3 1,194,020 + +1.0 1,194,021 - -2.2 1,194,037 + +1.0 1,194,037 + +0.4 1,194,037 + +0.2 1,194,038 - -0.9 1,194,038 - +1.5 1,194,038 - +0.9 1,194,056 + +0.9 1,194,057 - +1.3 1,194,057 - -0.5 1,194,057 - -2.0 1,194,057 - -0.2 1,194,073 + -1.3 1,194,073 + -0.0 1,194,074 - +0.1 1,194,074 - -0.2 1,194,080 + +0.2 1,194,080 + -0.6 1,194,080 + +0.3 1,194,080 + +0.4 1,194,080 + -1.7 1,194,080 + +2.3 1,194,080 + +0.3 1,194,080 + -0.4 1,194,081 - -0.6 1,194,081 - -1.9 1,194,081 - +1.3 1,194,081 - -0.6 1,194,081 - -0.7 1,194,081 - -1.0 1,194,081 - +0.4 1,194,081 - +0.6 1,194,081 - -0.3 1,194,081 - +1.3 1,194,081 - -1.4 1,194,135 + -0.7 1,194,135 + +0.0 1,194,135 + -0.2 1,194,136 - -0.4 1,194,142 + +0.3 1,194,142 + +1.0 1,194,142 + -0.2 1,194,142 + +0.4 1,194,143 - +0.3 1,194,143 - +0.7 1,194,143 - -0.7 1,194,143 - +0.8 1,194,364 + AO353_05420 0.14 -1.3 1,194,365 - AO353_05420 0.14 +0.1 1,194,776 + AO353_05420 0.40 +0.3
Or see this region's nucleotide sequence