Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_05395

Experiment: Gly-DL-Asp (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gly-DL-Asp (N)
1,188,576	+		AO353_05390	0.42	+3.3
1,188,576	+		AO353_05390	0.42	+4.4
1,188,576	+		AO353_05390	0.42	+5.7
1,188,742	+		AO353_05390	0.53	+10.5
1,188,762	+		AO353_05390	0.54	+10.4
1,188,762	+		AO353_05390	0.54	+8.5
1,188,762	+		AO353_05390	0.54	+9.6
1,188,762	+		AO353_05390	0.54	+9.7
1,188,763	-		AO353_05390	0.54	-1.0
1,188,763	-		AO353_05390	0.54	-2.1
1,188,763	-		AO353_05390	0.54	-1.3
1,188,763	-		AO353_05390	0.54	-0.5
1,188,789	+		AO353_05390	0.56	+11.8
1,188,789	+		AO353_05390	0.56	+11.3
1,188,789	+		AO353_05390	0.56	+10.8
1,188,789	+		AO353_05390	0.56	+12.0
1,188,789	+		AO353_05390	0.56	+11.9
1,188,789	+		AO353_05390	0.56	+10.3
1,188,789	+		AO353_05390	0.56	+12.5
1,188,789	+		AO353_05390	0.56	+11.4
1,188,789	+		AO353_05390	0.56	+11.4
1,188,789	+		AO353_05390	0.56	+12.9
1,188,789	+		AO353_05390	0.56	+10.7
1,188,789	+		AO353_05390	0.56	+12.5
1,188,789	+		AO353_05390	0.56	+11.7
1,188,789	+		AO353_05390	0.56	+11.5
1,188,789	+		AO353_05390	0.56	+10.0
1,188,789	+		AO353_05390	0.56	+12.4
1,188,790	-		AO353_05390	0.56	-3.0
1,188,790	-		AO353_05390	0.56	+0.5
1,188,790	-		AO353_05390	0.56	-0.3
1,188,790	-		AO353_05390	0.56	-1.3
1,188,790	-		AO353_05390	0.56	-0.6
1,188,790	-		AO353_05390	0.56	-1.8
1,188,790	-		AO353_05390	0.56	-0.1
1,188,790	-		AO353_05390	0.56	-0.4
1,188,790	-		AO353_05390	0.56	-0.7
1,188,846	+		AO353_05390	0.59	+11.8
1,188,846	+		AO353_05390	0.59	+13.2
1,188,846	+		AO353_05390	0.59	+11.8
1,188,846	+		AO353_05390	0.59	+11.8
1,188,847	-		AO353_05390	0.59	-0.6
1,188,847	-		AO353_05390	0.59	+1.2
1,188,847	-		AO353_05390	0.59	-1.3
1,188,847	-		AO353_05390	0.59	-0.1
1,188,847	-		AO353_05390	0.59	-1.9
1,188,847	-		AO353_05390	0.59	+0.1
1,188,847	-		AO353_05390	0.59	-0.8
1,188,847	-		AO353_05390	0.59	-0.6
1,188,861	+		AO353_05390	0.60	+9.6
1,188,861	+		AO353_05390	0.60	+11.8
1,188,861	+		AO353_05390	0.60	+12.0
1,188,861	+		AO353_05390	0.60	+11.7
1,188,862	-		AO353_05390	0.60	-1.3
1,188,862	-		AO353_05390	0.60	-1.5
1,188,862	-		AO353_05390	0.60	-0.5
1,188,866	+		AO353_05390	0.61	+11.4
1,188,998	+		AO353_05390	0.69	+13.1
1,188,998	+		AO353_05390	0.69	+13.0
1,188,999	-		AO353_05390	0.69	-1.7
1,188,999	-		AO353_05390	0.69	-0.6
1,189,098	-		AO353_05390	0.75	-1.3
1,189,099	+		AO353_05390	0.75	+11.7
1,189,099	+		AO353_05390	0.75	+13.7
1,189,099	+		AO353_05390	0.75	+12.7
1,189,100	-		AO353_05390	0.75	+0.0
1,189,100	-		AO353_05390	0.75	-0.1
1,189,100	-		AO353_05390	0.75	-1.0
1,189,100	-		AO353_05390	0.75	-1.7
1,189,100	-		AO353_05390	0.75	-1.2
1,189,194	-		AO353_05390	0.81	-1.3
1,189,260	+		AO353_05390	0.85	+12.7
1,189,260	+		AO353_05390	0.85	+14.2
1,189,261	-		AO353_05390	0.85	-1.9
1,189,261	-		AO353_05390	0.85	-0.2
1,189,345	-				+0.5
1,189,345	-				+0.3
1,189,408	+				+12.6
1,189,409	-				-0.3
1,189,413	-				-0.9
1,189,413	-				-0.8
1,189,424	+				+11.4
1,189,424	+				+9.8
1,189,425	-				-0.6
1,189,425	-				-1.3
1,189,476	-				-2.4
1,189,479	-				-2.3
1,189,491	+				+0.4
1,189,491	+				+3.0
1,189,491	+				+3.2
1,189,491	-				-1.1
1,189,492	-				-1.8
1,189,492	-				-2.1
1,189,492	-				-2.8
1,189,492	-				-2.0
1,189,492	-				-1.6
1,189,492	-				-0.3
1,189,492	-				-2.8
1,189,495	+				+1.8
1,189,496	-				-2.0
1,189,557	+				-0.6
1,189,557	+				-0.3
1,189,557	+				-1.3
1,189,557	+				-0.8
1,189,557	+				-1.6
1,189,557	+				-2.4
1,189,557	+				-0.6
1,189,558	-				-1.3
1,189,558	-				-1.1
1,189,558	-				-3.2
1,189,573	+				-1.7
1,189,573	+				+0.8
1,189,573	+				-1.5
1,189,574	-				-1.9
1,189,579	+				-3.0
1,189,579	+				-3.4
1,189,580	-				-2.1
1,189,580	-				-0.6
1,189,600	-				-1.9
1,189,754	+		AO353_05395	0.18	-0.5
1,189,754	+		AO353_05395	0.18	-1.3
1,189,754	+		AO353_05395	0.18	+0.5
1,189,754	+		AO353_05395	0.18	-0.9
1,189,754	+				+0.8
1,189,755	-		AO353_05395	0.18	-2.6
1,189,755	-		AO353_05395	0.18	-0.2
1,189,755	-		AO353_05395	0.18	-0.4
1,189,763	+		AO353_05395	0.19	-1.4
1,189,772	+		AO353_05395	0.20	-0.2
1,189,772	+		AO353_05395	0.20	-0.8
1,189,773	-		AO353_05395	0.20	-0.3
1,189,773	-		AO353_05395	0.20	-0.3
1,189,773	-		AO353_05395	0.20	-1.0
1,189,773	-		AO353_05395	0.20	-1.7
1,189,773	-		AO353_05395	0.20	-0.2
1,189,773	-		AO353_05395	0.20	-0.7
1,189,773	-		AO353_05395	0.20	-1.5
1,189,830	+		AO353_05395	0.26	+0.7
1,190,084	+		AO353_05395	0.51	-1.7
1,190,084	+		AO353_05395	0.51	+2.4
1,190,084	+		AO353_05395	0.51	-3.1
1,190,084	+		AO353_05395	0.51	+0.2
1,190,084	+		AO353_05395	0.51	+1.5
1,190,084	+		AO353_05395	0.51	+0.7
1,190,084	+		AO353_05395	0.51	-1.5
1,190,085	-		AO353_05395	0.51	-0.5
1,190,085	-		AO353_05395	0.51	-0.9
1,190,264	+		AO353_05395	0.69	-0.8
1,190,264	+		AO353_05395	0.69	+0.1
1,190,264	+		AO353_05395	0.69	-1.9
1,190,264	+		AO353_05395	0.69	-2.5
1,190,264	+		AO353_05395	0.69	-1.1
1,190,264	+		AO353_05395	0.69	-1.3
1,190,264	+		AO353_05395	0.69	-1.9
1,190,265	-		AO353_05395	0.69	+0.7
1,190,265	-		AO353_05395	0.69	-2.7
1,190,265	-		AO353_05395	0.69	-0.5
1,190,265	-		AO353_05395	0.69	-2.2
1,190,265	-		AO353_05395	0.69	-3.4
1,190,265	-		AO353_05395	0.69	-0.3
1,190,308	-		AO353_05395	0.73	-3.3
1,190,364	+		AO353_05395	0.79	-1.1
1,190,465	+		AO353_05395	0.89	-1.3
1,190,465	+		AO353_05395	0.89	-0.3
1,190,527	-				-2.7
1,190,533	+				-2.3
1,190,534	-				-0.2
1,190,540	+				-2.4
1,190,541	-				-1.1
1,190,584	+				-0.5
1,190,584	+				-1.6
1,190,584	+				-2.0
1,190,584	+				-1.2
1,190,584	+				+0.5
1,190,584	+				-1.3
1,190,585	-				-2.0
1,190,585	-				-1.5
1,190,588	+				-1.6
1,190,588	+				-1.9
1,190,588	+				-2.8
1,190,588	+				-0.6
1,190,588	+				-0.2
1,190,588	+				-1.1
1,190,588	+				+1.2
1,190,588	+				-0.7
1,190,588	+				-1.4
1,190,588	+				-0.5
1,190,588	+				+2.0
1,190,588	+				-1.6
1,190,588	+				-2.9
1,190,588	+				-0.9
1,190,588	+				-2.6
1,190,588	+				-0.6
1,190,588	+				-1.6
1,190,588	+				-0.8
1,190,588	+				-0.5
1,190,588	+				-1.1
1,190,588	+				-2.4
1,190,588	+				-0.8
1,190,589	-				-2.0
1,190,589	-				-0.9
1,190,589	-				-1.6
1,190,589	-				-3.2
1,190,589	-				+0.8
1,190,589	-				-1.1
1,190,589	-				+0.8
1,190,589	-				-1.0
1,190,589	-				-0.9
1,190,589	-				-0.6
1,190,589	-				-0.9
1,190,589	-				-1.8
1,190,589	-				-2.2
1,190,589	-				+0.0
1,190,589	-				-1.8
1,190,589	-				-1.6
1,190,589	-				-1.2
1,190,589	-				+1.5
1,190,589	-				-2.4
1,190,589	-				-0.5
1,190,594	+				-3.1
1,190,594	+				-1.2
1,190,594	+				-1.6
1,190,595	-				-0.5
1,190,595	-				-3.4
1,190,603	+				+0.0
1,190,646	+				-0.3
1,190,646	+				-1.3
1,190,646	+				-2.3
1,190,647	-				-0.9
1,190,647	-				-2.3
1,191,117	+		AO353_05400	0.58	-1.3
1,191,117	+		AO353_05400	0.58	+0.2
1,191,117	+		AO353_05400	0.58	-2.5
1,191,117	+		AO353_05400	0.58	+1.4
1,191,118	-		AO353_05400	0.58	-3.3
1,191,118	-		AO353_05400	0.58	-2.7
1,191,118	-		AO353_05400	0.58	-1.6
1,191,118	-		AO353_05400	0.58	-2.7
1,191,118	-		AO353_05400	0.58	-2.0
1,191,118	-		AO353_05400	0.58	-1.0
1,191,165	+		AO353_05400	0.63	-1.4
1,191,165	+		AO353_05400	0.63	-0.3
1,191,166	-		AO353_05400	0.63	-1.7
1,191,166	-		AO353_05400	0.63	-1.6
1,191,166	-		AO353_05400	0.63	-2.4
1,191,166	-		AO353_05400	0.63	-0.5
1,191,166	-		AO353_05400	0.63	-0.8
1,191,166	-		AO353_05400	0.63	+0.2
1,191,166	-		AO353_05400	0.63	-1.2
1,191,322	+		AO353_05400	0.80	-3.2
1,191,322	+		AO353_05400	0.80	-0.4
1,191,322	+		AO353_05400	0.80	-2.0
1,191,323	-		AO353_05400	0.80	-0.8
1,191,323	-		AO353_05400	0.80	-1.5
1,191,323	-		AO353_05400	0.80	-3.0
1,191,323	-		AO353_05400	0.80	-2.4
1,191,323	-		AO353_05400	0.80	-1.9
1,191,373	-		AO353_05400	0.86	-0.8
1,191,373	-		AO353_05400	0.86	-1.9