Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_03765 and AO353_03770 are separated by 127 nucleotides AO353_03770 and AO353_03775 are separated by 245 nucleotides AO353_03775 and AO353_03780 are separated by 135 nucleotides AO353_03780 and AO353_03785 are separated by 28 nucleotides
AO353_03765: AO353_03765 - hypothetical protein, at 804,592 to 804,966
_03765
AO353_03770: AO353_03770 - hypothetical protein, at 805,094 to 805,393
_03770
AO353_03775: AO353_03775 - pyruvate kinase, at 805,639 to 807,090
_03775
AO353_03780: AO353_03780 - enoyl-CoA hydratase, at 807,226 to 807,975
_03780
AO353_03785: AO353_03785 - hypothetical protein, at 808,004 to 808,939
_03785
Position (kb)
805
806
807
808 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 804.687 kb on - strand, within AO353_03765 at 804.722 kb on + strand, within AO353_03765 at 804.722 kb on + strand, within AO353_03765 at 804.722 kb on + strand, within AO353_03765 at 804.722 kb on + strand, within AO353_03765 at 804.722 kb on + strand, within AO353_03765 at 804.722 kb on + strand, within AO353_03765 at 804.723 kb on - strand, within AO353_03765 at 804.723 kb on - strand, within AO353_03765 at 804.743 kb on + strand, within AO353_03765 at 804.743 kb on + strand, within AO353_03765 at 804.743 kb on + strand, within AO353_03765 at 804.743 kb on + strand, within AO353_03765 at 804.743 kb on + strand, within AO353_03765 at 804.744 kb on - strand, within AO353_03765 at 804.744 kb on - strand, within AO353_03765 at 804.744 kb on - strand, within AO353_03765 at 804.744 kb on - strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.796 kb on + strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.797 kb on - strand, within AO353_03765 at 804.798 kb on + strand, within AO353_03765 at 804.798 kb on + strand, within AO353_03765 at 804.798 kb on + strand, within AO353_03765 at 804.798 kb on + strand, within AO353_03765 at 804.798 kb on + strand, within AO353_03765 at 804.798 kb on + strand, within AO353_03765 at 804.798 kb on + strand, within AO353_03765 at 804.799 kb on - strand, within AO353_03765 at 804.799 kb on - strand, within AO353_03765 at 804.799 kb on - strand, within AO353_03765 at 804.799 kb on - strand, within AO353_03765 at 804.799 kb on - strand, within AO353_03765 at 804.799 kb on - strand, within AO353_03765 at 804.800 kb on + strand, within AO353_03765 at 804.800 kb on + strand, within AO353_03765 at 804.801 kb on - strand, within AO353_03765 at 804.801 kb on - strand, within AO353_03765 at 804.801 kb on - strand, within AO353_03765 at 804.872 kb on + strand, within AO353_03765 at 804.872 kb on + strand, within AO353_03765 at 805.077 kb on - strand at 805.168 kb on + strand, within AO353_03770 at 805.168 kb on + strand, within AO353_03770 at 805.168 kb on + strand, within AO353_03770 at 805.169 kb on - strand, within AO353_03770 at 805.169 kb on - strand, within AO353_03770 at 805.169 kb on - strand, within AO353_03770 at 805.169 kb on - strand, within AO353_03770 at 805.276 kb on + strand, within AO353_03770 at 805.277 kb on - strand, within AO353_03770 at 805.277 kb on - strand, within AO353_03770 at 805.277 kb on - strand, within AO353_03770 at 805.277 kb on - strand, within AO353_03770 at 805.280 kb on - strand, within AO353_03770 at 805.280 kb on - strand, within AO353_03770 at 805.367 kb on - strand at 805.466 kb on + strand at 805.466 kb on + strand at 805.466 kb on + strand at 805.466 kb on + strand at 805.467 kb on - strand at 805.467 kb on - strand at 805.473 kb on + strand at 805.506 kb on + strand at 805.507 kb on - strand at 805.547 kb on - strand at 805.566 kb on - strand at 805.566 kb on - strand at 805.585 kb on + strand at 805.585 kb on + strand at 805.586 kb on - strand at 805.586 kb on - strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.600 kb on + strand at 805.601 kb on - strand at 805.601 kb on - strand at 805.601 kb on - strand at 805.601 kb on - strand at 805.601 kb on - strand at 805.601 kb on - strand at 805.603 kb on + strand at 805.603 kb on + strand at 805.604 kb on - strand at 805.604 kb on - strand at 805.604 kb on - strand at 805.604 kb on - strand at 805.604 kb on - strand at 805.604 kb on - strand at 805.604 kb on - strand at 805.653 kb on + strand at 805.686 kb on + strand at 805.687 kb on - strand at 805.973 kb on - strand, within AO353_03775 at 806.206 kb on + strand, within AO353_03775 at 806.207 kb on - strand, within AO353_03775 at 806.248 kb on + strand, within AO353_03775 at 806.248 kb on + strand, within AO353_03775 at 806.249 kb on - strand, within AO353_03775 at 806.249 kb on - strand, within AO353_03775 at 806.249 kb on - strand, within AO353_03775 at 806.249 kb on - strand, within AO353_03775 at 806.249 kb on - strand, within AO353_03775 at 806.249 kb on - strand, within AO353_03775 at 806.249 kb on - strand, within AO353_03775 at 806.425 kb on - strand, within AO353_03775 at 806.463 kb on + strand, within AO353_03775 at 806.463 kb on + strand, within AO353_03775 at 806.464 kb on - strand, within AO353_03775 at 806.555 kb on + strand, within AO353_03775 at 806.563 kb on + strand, within AO353_03775 at 806.564 kb on - strand, within AO353_03775 at 806.564 kb on - strand, within AO353_03775 at 806.564 kb on - strand, within AO353_03775 at 806.743 kb on + strand, within AO353_03775 at 806.743 kb on + strand, within AO353_03775 at 806.743 kb on + strand, within AO353_03775 at 806.743 kb on + strand, within AO353_03775 at 806.743 kb on + strand, within AO353_03775 at 806.743 kb on + strand, within AO353_03775 at 806.743 kb on + strand, within AO353_03775 at 806.744 kb on - strand, within AO353_03775 at 806.744 kb on - strand, within AO353_03775 at 806.744 kb on - strand, within AO353_03775 at 806.744 kb on - strand, within AO353_03775 at 806.744 kb on - strand, within AO353_03775 at 806.744 kb on - strand, within AO353_03775 at 806.744 kb on - strand, within AO353_03775 at 806.846 kb on - strand, within AO353_03775 at 806.902 kb on + strand, within AO353_03775 at 806.903 kb on - strand, within AO353_03775 at 806.903 kb on - strand, within AO353_03775 at 806.903 kb on - strand, within AO353_03775 at 806.903 kb on - strand, within AO353_03775 at 806.903 kb on - strand, within AO353_03775 at 806.903 kb on - strand, within AO353_03775 at 806.903 kb on - strand, within AO353_03775 at 806.903 kb on - strand, within AO353_03775 at 806.909 kb on + strand, within AO353_03775 at 806.910 kb on - strand, within AO353_03775 at 807.028 kb on + strand at 807.028 kb on + strand at 807.029 kb on - strand at 807.029 kb on - strand at 807.029 kb on - strand at 807.093 kb on - strand at 807.155 kb on + strand at 807.155 kb on + strand at 807.156 kb on - strand at 807.156 kb on - strand at 807.156 kb on - strand at 807.156 kb on - strand at 807.240 kb on + strand at 807.623 kb on + strand, within AO353_03780 at 807.623 kb on + strand at 807.623 kb on + strand, within AO353_03780 at 807.623 kb on + strand, within AO353_03780 at 807.623 kb on + strand, within AO353_03780 at 807.623 kb on + strand, within AO353_03780 at 807.624 kb on - strand, within AO353_03780 at 807.624 kb on - strand, within AO353_03780 at 807.624 kb on - strand, within AO353_03780 at 807.624 kb on - strand, within AO353_03780 at 807.624 kb on - strand, within AO353_03780 at 807.624 kb on - strand, within AO353_03780 at 807.624 kb on - strand, within AO353_03780 at 807.643 kb on + strand, within AO353_03780 at 807.643 kb on + strand, within AO353_03780 at 807.644 kb on - strand, within AO353_03780 at 807.644 kb on - strand, within AO353_03780 at 807.644 kb on - strand, within AO353_03780 at 807.796 kb on - strand, within AO353_03780 at 807.823 kb on + strand, within AO353_03780 at 807.824 kb on - strand, within AO353_03780 at 807.824 kb on - strand, within AO353_03780 at 807.824 kb on - strand, within AO353_03780 at 807.824 kb on - strand, within AO353_03780 at 807.856 kb on + strand, within AO353_03780 at 807.856 kb on + strand, within AO353_03780 at 807.857 kb on - strand, within AO353_03780 at 807.881 kb on + strand, within AO353_03780 at 807.881 kb on + strand, within AO353_03780 at 807.881 kb on + strand, within AO353_03780 at 807.882 kb on - strand, within AO353_03780 at 807.882 kb on - strand, within AO353_03780 at 807.882 kb on - strand, within AO353_03780 at 807.882 kb on - strand, within AO353_03780 at 807.882 kb on - strand, within AO353_03780 at 807.882 kb on - strand, within AO353_03780 at 807.882 kb on - strand, within AO353_03780 at 808.062 kb on + strand at 808.062 kb on + strand at 808.062 kb on + strand at 808.063 kb on - strand at 808.063 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 804,687 - AO353_03765 0.25 -1.3 804,722 + AO353_03765 0.35 -0.8 804,722 + AO353_03765 0.35 -0.1 804,722 + AO353_03765 0.35 +1.2 804,722 + AO353_03765 0.35 +0.0 804,722 + AO353_03765 0.35 +0.8 804,722 + AO353_03765 0.35 +0.4 804,723 - AO353_03765 0.35 -0.5 804,723 - AO353_03765 0.35 +0.7 804,743 + AO353_03765 0.40 -0.2 804,743 + AO353_03765 0.40 -1.5 804,743 + AO353_03765 0.40 -0.8 804,743 + AO353_03765 0.40 -0.3 804,743 + AO353_03765 0.40 +0.9 804,744 - AO353_03765 0.41 +2.0 804,744 - AO353_03765 0.41 +0.9 804,744 - AO353_03765 0.41 +1.6 804,744 - AO353_03765 0.41 +0.5 804,796 + AO353_03765 0.54 +0.3 804,796 + AO353_03765 0.54 +0.1 804,796 + AO353_03765 0.54 -0.2 804,796 + AO353_03765 0.54 -0.9 804,796 + AO353_03765 0.54 +1.0 804,796 + AO353_03765 0.54 +0.1 804,796 + +1.7 804,796 + AO353_03765 0.54 -1.0 804,796 + AO353_03765 0.54 -0.3 804,796 + AO353_03765 0.54 +0.4 804,796 + AO353_03765 0.54 -0.1 804,796 + AO353_03765 0.54 -0.2 804,796 + AO353_03765 0.54 -0.3 804,796 + AO353_03765 0.54 -1.8 804,796 + AO353_03765 0.54 +0.8 804,796 + AO353_03765 0.54 -0.6 804,797 - AO353_03765 0.55 -0.5 804,797 - AO353_03765 0.55 -0.5 804,797 - AO353_03765 0.55 -0.4 804,797 - AO353_03765 0.55 +0.3 804,797 - AO353_03765 0.55 +0.2 804,797 - AO353_03765 0.55 +0.5 804,797 - AO353_03765 0.55 -0.2 804,797 - AO353_03765 0.55 +0.1 804,797 - AO353_03765 0.55 +1.1 804,797 - AO353_03765 0.55 -1.9 804,797 - AO353_03765 0.55 +1.3 804,797 - AO353_03765 0.55 +1.0 804,797 - AO353_03765 0.55 -0.8 804,798 + AO353_03765 0.55 +0.4 804,798 + AO353_03765 0.55 -0.5 804,798 + AO353_03765 0.55 -1.8 804,798 + AO353_03765 0.55 -0.3 804,798 + AO353_03765 0.55 -0.5 804,798 + AO353_03765 0.55 -0.0 804,798 + AO353_03765 0.55 +0.5 804,799 - AO353_03765 0.55 -0.8 804,799 - AO353_03765 0.55 -1.5 804,799 - AO353_03765 0.55 +2.5 804,799 - AO353_03765 0.55 +1.4 804,799 - AO353_03765 0.55 +0.4 804,799 - AO353_03765 0.55 -0.2 804,800 + AO353_03765 0.55 +1.0 804,800 + AO353_03765 0.55 -0.8 804,801 - AO353_03765 0.56 +0.1 804,801 - AO353_03765 0.56 -0.9 804,801 - AO353_03765 0.56 -0.6 804,872 + AO353_03765 0.75 +1.2 804,872 + AO353_03765 0.75 +0.3 805,077 - -0.2 805,168 + AO353_03770 0.25 -0.6 805,168 + AO353_03770 0.25 -0.2 805,168 + AO353_03770 0.25 -1.1 805,169 - AO353_03770 0.25 +0.9 805,169 - AO353_03770 0.25 +0.2 805,169 - AO353_03770 0.25 +0.1 805,169 - AO353_03770 0.25 -0.3 805,276 + AO353_03770 0.61 -0.1 805,277 - AO353_03770 0.61 +1.0 805,277 - AO353_03770 0.61 -0.5 805,277 - AO353_03770 0.61 -0.5 805,277 - AO353_03770 0.61 +0.2 805,280 - AO353_03770 0.62 +0.4 805,280 - AO353_03770 0.62 -0.6 805,367 - -0.5 805,466 + +0.4 805,466 + +0.2 805,466 + -0.2 805,466 + -1.4 805,467 - -0.5 805,467 - -0.6 805,473 + +0.6 805,506 + +0.1 805,507 - -1.0 805,547 - +1.0 805,566 - -0.3 805,566 - +1.4 805,585 + -2.3 805,585 + +1.3 805,586 - -2.2 805,586 - -1.2 805,600 + +0.7 805,600 + +1.3 805,600 + +0.6 805,600 + +0.4 805,600 + +0.1 805,600 + +0.8 805,600 + -0.9 805,600 + +0.2 805,600 + +1.7 805,600 + +0.2 805,600 + -0.2 805,600 + -1.0 805,601 - -0.9 805,601 - -0.5 805,601 - +1.9 805,601 - -0.3 805,601 - -0.8 805,601 - -1.6 805,603 + +0.6 805,603 + +1.3 805,604 - +1.1 805,604 - +0.1 805,604 - -0.1 805,604 - +0.1 805,604 - +0.5 805,604 - -3.6 805,604 - -1.8 805,653 + -1.6 805,686 + -0.5 805,687 - -0.1 805,973 - AO353_03775 0.23 -0.0 806,206 + AO353_03775 0.39 +0.9 806,207 - AO353_03775 0.39 -1.7 806,248 + AO353_03775 0.42 +0.5 806,248 + AO353_03775 0.42 -1.3 806,249 - AO353_03775 0.42 +0.8 806,249 - AO353_03775 0.42 -1.6 806,249 - AO353_03775 0.42 -0.7 806,249 - AO353_03775 0.42 -1.5 806,249 - AO353_03775 0.42 -0.9 806,249 - AO353_03775 0.42 -1.2 806,249 - AO353_03775 0.42 -0.5 806,425 - AO353_03775 0.54 -1.8 806,463 + AO353_03775 0.57 -1.0 806,463 + AO353_03775 0.57 +0.4 806,464 - AO353_03775 0.57 +0.7 806,555 + AO353_03775 0.63 -2.5 806,563 + AO353_03775 0.64 -1.8 806,564 - AO353_03775 0.64 -2.5 806,564 - AO353_03775 0.64 +0.4 806,564 - AO353_03775 0.64 -0.1 806,743 + AO353_03775 0.76 -1.1 806,743 + AO353_03775 0.76 -0.9 806,743 + AO353_03775 0.76 -0.5 806,743 + AO353_03775 0.76 +0.5 806,743 + AO353_03775 0.76 +0.4 806,743 + AO353_03775 0.76 +1.0 806,743 + AO353_03775 0.76 -2.0 806,744 - AO353_03775 0.76 +0.1 806,744 - AO353_03775 0.76 -0.3 806,744 - AO353_03775 0.76 -0.7 806,744 - AO353_03775 0.76 -2.1 806,744 - AO353_03775 0.76 -2.1 806,744 - AO353_03775 0.76 -0.6 806,744 - AO353_03775 0.76 -1.0 806,846 - AO353_03775 0.83 -1.0 806,902 + AO353_03775 0.87 -1.0 806,903 - AO353_03775 0.87 -1.4 806,903 - AO353_03775 0.87 +1.1 806,903 - AO353_03775 0.87 -0.1 806,903 - AO353_03775 0.87 -1.7 806,903 - AO353_03775 0.87 +0.1 806,903 - AO353_03775 0.87 -1.9 806,903 - AO353_03775 0.87 -1.3 806,903 - AO353_03775 0.87 -2.0 806,909 + AO353_03775 0.87 -0.5 806,910 - AO353_03775 0.88 -0.3 807,028 + -1.5 807,028 + -0.6 807,029 - -0.4 807,029 - -1.5 807,029 - +0.3 807,093 - +0.5 807,155 + -0.2 807,155 + +0.7 807,156 - +0.5 807,156 - -0.1 807,156 - +0.7 807,156 - +0.9 807,240 + +0.3 807,623 + AO353_03780 0.53 +2.7 807,623 + +0.4 807,623 + AO353_03780 0.53 +0.8 807,623 + AO353_03780 0.53 +0.3 807,623 + AO353_03780 0.53 -0.5 807,623 + AO353_03780 0.53 -0.1 807,624 - AO353_03780 0.53 +1.6 807,624 - AO353_03780 0.53 -0.4 807,624 - AO353_03780 0.53 +2.4 807,624 - AO353_03780 0.53 -1.6 807,624 - AO353_03780 0.53 +1.0 807,624 - AO353_03780 0.53 +0.4 807,624 - AO353_03780 0.53 +0.3 807,643 + AO353_03780 0.56 +0.6 807,643 + AO353_03780 0.56 -1.1 807,644 - AO353_03780 0.56 -1.0 807,644 - AO353_03780 0.56 -0.9 807,644 - AO353_03780 0.56 -2.1 807,796 - AO353_03780 0.76 +0.9 807,823 + AO353_03780 0.80 +0.7 807,824 - AO353_03780 0.80 -0.2 807,824 - AO353_03780 0.80 +0.3 807,824 - AO353_03780 0.80 +0.8 807,824 - AO353_03780 0.80 -0.0 807,856 + AO353_03780 0.84 +0.5 807,856 + AO353_03780 0.84 -1.7 807,857 - AO353_03780 0.84 +1.4 807,881 + AO353_03780 0.87 -0.6 807,881 + AO353_03780 0.87 +0.4 807,881 + AO353_03780 0.87 -1.5 807,882 - AO353_03780 0.87 -0.3 807,882 - AO353_03780 0.87 +0.1 807,882 - AO353_03780 0.87 -0.5 807,882 - AO353_03780 0.87 -1.4 807,882 - AO353_03780 0.87 +0.0 807,882 - AO353_03780 0.87 -0.8 807,882 - AO353_03780 0.87 -1.0 808,062 + +0.6 808,062 + +0.4 808,062 + +0.3 808,063 - +0.7 808,063 - +1.4
Or see this region's nucleotide sequence