Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_01345 and AO353_01350 are separated by 3 nucleotides AO353_01350 and AO353_01355 overlap by 1 nucleotides
AO353_01345: AO353_01345 - aminodeoxychorismate lyase, at 290,226 to 291,416
_01345
AO353_01350: AO353_01350 - 4-amino-4-deoxychorismate lyase, at 291,420 to 292,235
_01350
AO353_01355: AO353_01355 - 3-oxoacyl-ACP synthase, at 292,235 to 293,479
_01355
Position (kb)
291
292
293 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 290.504 kb on - strand, within AO353_01345 at 290.504 kb on - strand, within AO353_01345 at 290.504 kb on - strand, within AO353_01345 at 290.504 kb on - strand, within AO353_01345 at 290.506 kb on - strand, within AO353_01345 at 290.506 kb on - strand, within AO353_01345 at 290.506 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.595 kb on - strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.596 kb on + strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.597 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.601 kb on - strand, within AO353_01345 at 290.606 kb on - strand, within AO353_01345 at 290.606 kb on - strand, within AO353_01345 at 290.651 kb on - strand, within AO353_01345 at 290.651 kb on - strand, within AO353_01345 at 290.651 kb on - strand, within AO353_01345 at 290.669 kb on - strand, within AO353_01345 at 290.669 kb on - strand, within AO353_01345 at 290.669 kb on - strand, within AO353_01345 at 290.669 kb on - strand, within AO353_01345 at 290.669 kb on - strand, within AO353_01345 at 290.669 kb on - strand, within AO353_01345 at 290.669 kb on - strand, within AO353_01345 at 290.801 kb on - strand, within AO353_01345 at 290.801 kb on - strand, within AO353_01345 at 290.811 kb on - strand, within AO353_01345 at 290.813 kb on - strand, within AO353_01345 at 290.813 kb on - strand, within AO353_01345 at 290.813 kb on - strand, within AO353_01345 at 290.873 kb on - strand, within AO353_01345 at 290.921 kb on - strand, within AO353_01345 at 290.921 kb on - strand, within AO353_01345 at 290.921 kb on - strand, within AO353_01345 at 290.921 kb on - strand, within AO353_01345 at 291.086 kb on - strand, within AO353_01345 at 291.155 kb on - strand, within AO353_01345 at 291.283 kb on - strand, within AO353_01345 at 291.283 kb on - strand, within AO353_01345 at 291.292 kb on - strand, within AO353_01345 at 291.292 kb on - strand, within AO353_01345 at 291.292 kb on - strand, within AO353_01345 at 291.292 kb on - strand, within AO353_01345 at 291.306 kb on - strand at 291.364 kb on - strand at 291.408 kb on - strand at 291.408 kb on - strand at 291.408 kb on - strand at 291.408 kb on - strand at 291.496 kb on + strand at 291.496 kb on + strand at 291.496 kb on + strand at 291.496 kb on + strand at 291.496 kb on + strand at 291.497 kb on - strand at 291.497 kb on - strand at 291.497 kb on - strand at 291.497 kb on - strand at 291.497 kb on - strand at 291.497 kb on - strand at 291.497 kb on - strand at 291.520 kb on + strand, within AO353_01350 at 291.520 kb on + strand, within AO353_01350 at 291.704 kb on + strand, within AO353_01350 at 291.704 kb on + strand, within AO353_01350 at 291.875 kb on + strand, within AO353_01350 at 291.875 kb on + strand, within AO353_01350 at 291.875 kb on + strand, within AO353_01350 at 291.876 kb on - strand, within AO353_01350 at 291.876 kb on - strand, within AO353_01350 at 291.921 kb on + strand, within AO353_01350 at 291.921 kb on + strand, within AO353_01350 at 291.922 kb on - strand, within AO353_01350 at 291.922 kb on - strand, within AO353_01350 at 291.922 kb on - strand, within AO353_01350 at 291.929 kb on + strand, within AO353_01350 at 291.929 kb on + strand, within AO353_01350 at 291.929 kb on + strand, within AO353_01350 at 291.929 kb on + strand, within AO353_01350 at 291.929 kb on + strand, within AO353_01350 at 291.930 kb on - strand, within AO353_01350 at 292.027 kb on + strand, within AO353_01350 at 292.027 kb on + strand, within AO353_01350 at 292.027 kb on + strand, within AO353_01350 at 292.028 kb on - strand, within AO353_01350 at 292.028 kb on - strand, within AO353_01350 at 292.319 kb on - strand at 292.319 kb on - strand at 292.319 kb on - strand at 292.564 kb on + strand, within AO353_01355 at 292.564 kb on + strand, within AO353_01355 at 292.564 kb on + strand, within AO353_01355 at 292.565 kb on - strand, within AO353_01355 at 292.565 kb on - strand, within AO353_01355 at 292.565 kb on - strand, within AO353_01355 at 292.581 kb on + strand, within AO353_01355 at 292.581 kb on + strand, within AO353_01355 at 292.581 kb on + strand, within AO353_01355 at 292.581 kb on + strand, within AO353_01355 at 292.582 kb on - strand, within AO353_01355 at 292.582 kb on - strand, within AO353_01355 at 292.582 kb on - strand, within AO353_01355 at 292.582 kb on - strand, within AO353_01355 at 292.582 kb on - strand, within AO353_01355 at 292.716 kb on + strand, within AO353_01355 at 292.717 kb on - strand, within AO353_01355 at 292.969 kb on + strand, within AO353_01355 at 292.988 kb on - strand, within AO353_01355 at 293.007 kb on + strand, within AO353_01355 at 293.007 kb on + strand, within AO353_01355 at 293.007 kb on + strand, within AO353_01355 at 293.008 kb on - strand, within AO353_01355 at 293.008 kb on - strand, within AO353_01355 at 293.008 kb on - strand, within AO353_01355 at 293.008 kb on - strand, within AO353_01355 at 293.008 kb on - strand, within AO353_01355 at 293.011 kb on + strand, within AO353_01355 at 293.023 kb on + strand, within AO353_01355 at 293.056 kb on + strand, within AO353_01355 at 293.057 kb on - strand, within AO353_01355 at 293.057 kb on - strand, within AO353_01355 at 293.057 kb on - strand, within AO353_01355 at 293.180 kb on - strand, within AO353_01355 at 293.180 kb on - strand, within AO353_01355
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 290,504 - AO353_01345 0.23 +0.2 290,504 - AO353_01345 0.23 +0.6 290,504 - AO353_01345 0.23 -0.0 290,504 - AO353_01345 0.23 +1.3 290,506 - AO353_01345 0.24 +1.0 290,506 - AO353_01345 0.24 -0.4 290,506 - AO353_01345 0.24 -1.9 290,595 - AO353_01345 0.31 +1.2 290,595 - AO353_01345 0.31 -0.3 290,595 - AO353_01345 0.31 -0.4 290,595 - AO353_01345 0.31 +0.1 290,595 - AO353_01345 0.31 +1.6 290,595 - AO353_01345 0.31 +0.9 290,595 - AO353_01345 0.31 -0.2 290,595 - AO353_01345 0.31 +0.4 290,595 - AO353_01345 0.31 +0.6 290,595 - AO353_01345 0.31 +0.4 290,596 + AO353_01345 0.31 +1.5 290,596 + AO353_01345 0.31 -0.0 290,596 + AO353_01345 0.31 +0.3 290,596 + AO353_01345 0.31 -1.7 290,596 + AO353_01345 0.31 -1.7 290,596 + AO353_01345 0.31 +1.3 290,596 + AO353_01345 0.31 -0.6 290,596 + AO353_01345 0.31 -1.4 290,596 + AO353_01345 0.31 -2.0 290,596 + AO353_01345 0.31 +0.5 290,596 + AO353_01345 0.31 -0.1 290,596 + AO353_01345 0.31 +0.0 290,596 + AO353_01345 0.31 -1.3 290,596 + AO353_01345 0.31 -0.5 290,596 + AO353_01345 0.31 -0.0 290,596 + AO353_01345 0.31 +1.5 290,596 + AO353_01345 0.31 +0.6 290,596 + AO353_01345 0.31 +1.8 290,596 + AO353_01345 0.31 +1.5 290,596 + AO353_01345 0.31 +0.4 290,596 + AO353_01345 0.31 +1.5 290,597 - AO353_01345 0.31 +0.3 290,597 - AO353_01345 0.31 +0.7 290,597 - AO353_01345 0.31 -1.4 290,597 - AO353_01345 0.31 +0.1 290,597 - AO353_01345 0.31 -1.4 290,597 - AO353_01345 0.31 +0.5 290,597 - AO353_01345 0.31 -0.9 290,597 - AO353_01345 0.31 +0.3 290,597 - AO353_01345 0.31 +0.9 290,597 - AO353_01345 0.31 -0.3 290,597 - AO353_01345 0.31 +0.2 290,597 - AO353_01345 0.31 -0.2 290,597 - AO353_01345 0.31 -1.5 290,597 - AO353_01345 0.31 -0.2 290,597 - AO353_01345 0.31 +0.4 290,601 - AO353_01345 0.31 +0.6 290,601 - AO353_01345 0.31 -0.7 290,601 - AO353_01345 0.31 -1.6 290,601 - AO353_01345 0.31 -1.5 290,601 - AO353_01345 0.31 -0.2 290,601 - AO353_01345 0.31 -0.1 290,601 - AO353_01345 0.31 -2.2 290,601 - AO353_01345 0.31 +2.1 290,601 - AO353_01345 0.31 -1.5 290,601 - AO353_01345 0.31 -2.2 290,601 - AO353_01345 0.31 -1.3 290,601 - AO353_01345 0.31 +0.7 290,601 - AO353_01345 0.31 +0.2 290,601 - AO353_01345 0.31 -0.2 290,606 - AO353_01345 0.32 +0.1 290,606 - AO353_01345 0.32 +0.8 290,651 - AO353_01345 0.36 -2.0 290,651 - AO353_01345 0.36 -0.6 290,651 - AO353_01345 0.36 -0.2 290,669 - AO353_01345 0.37 -0.1 290,669 - AO353_01345 0.37 +1.2 290,669 - AO353_01345 0.37 -0.6 290,669 - AO353_01345 0.37 +1.0 290,669 - AO353_01345 0.37 -0.8 290,669 - AO353_01345 0.37 -0.6 290,669 - AO353_01345 0.37 +0.1 290,801 - AO353_01345 0.48 -0.8 290,801 - AO353_01345 0.48 -1.4 290,811 - AO353_01345 0.49 -1.7 290,813 - AO353_01345 0.49 -0.4 290,813 - AO353_01345 0.49 -2.0 290,813 - AO353_01345 0.49 -2.9 290,873 - AO353_01345 0.54 -1.5 290,921 - AO353_01345 0.58 +0.2 290,921 - AO353_01345 0.58 +0.4 290,921 - AO353_01345 0.58 +0.4 290,921 - AO353_01345 0.58 -0.7 291,086 - AO353_01345 0.72 +0.6 291,155 - AO353_01345 0.78 -0.7 291,283 - AO353_01345 0.89 -0.6 291,283 - AO353_01345 0.89 -0.0 291,292 - AO353_01345 0.90 -0.1 291,292 - AO353_01345 0.90 -0.0 291,292 - AO353_01345 0.90 -1.2 291,292 - AO353_01345 0.90 -0.4 291,306 - +0.6 291,364 - -0.6 291,408 - -1.0 291,408 - -0.4 291,408 - -0.6 291,408 - -0.5 291,496 + -0.6 291,496 + -0.8 291,496 + +0.8 291,496 + -1.6 291,496 + +1.1 291,497 - -2.4 291,497 - -1.7 291,497 - -0.3 291,497 - +1.0 291,497 - -0.3 291,497 - -1.4 291,497 - -1.3 291,520 + AO353_01350 0.12 +0.5 291,520 + AO353_01350 0.12 -0.5 291,704 + AO353_01350 0.35 -2.2 291,704 + AO353_01350 0.35 +1.7 291,875 + AO353_01350 0.56 -1.0 291,875 + AO353_01350 0.56 -1.2 291,875 + AO353_01350 0.56 -2.4 291,876 - AO353_01350 0.56 -0.5 291,876 - AO353_01350 0.56 -2.6 291,921 + AO353_01350 0.61 +0.4 291,921 + AO353_01350 0.61 -0.6 291,922 - AO353_01350 0.62 -0.8 291,922 - AO353_01350 0.62 -0.5 291,922 - AO353_01350 0.62 -1.0 291,929 + AO353_01350 0.62 +0.4 291,929 + AO353_01350 0.62 +0.4 291,929 + AO353_01350 0.62 -1.8 291,929 + AO353_01350 0.62 -0.3 291,929 + AO353_01350 0.62 -1.8 291,930 - AO353_01350 0.62 -2.7 292,027 + AO353_01350 0.74 -1.3 292,027 + AO353_01350 0.74 -0.5 292,027 + AO353_01350 0.74 -0.8 292,028 - AO353_01350 0.75 -0.3 292,028 - AO353_01350 0.75 -1.5 292,319 - -0.5 292,319 - -0.5 292,319 - +2.5 292,564 + AO353_01355 0.26 -1.8 292,564 + AO353_01355 0.26 -1.0 292,564 + AO353_01355 0.26 -0.8 292,565 - AO353_01355 0.27 +0.3 292,565 - AO353_01355 0.27 +0.1 292,565 - AO353_01355 0.27 -0.5 292,581 + AO353_01355 0.28 +0.1 292,581 + AO353_01355 0.28 +2.2 292,581 + AO353_01355 0.28 +2.0 292,581 + AO353_01355 0.28 -1.6 292,582 - AO353_01355 0.28 -0.7 292,582 - AO353_01355 0.28 +0.4 292,582 - AO353_01355 0.28 +1.3 292,582 - AO353_01355 0.28 -0.0 292,582 - AO353_01355 0.28 +0.7 292,716 + AO353_01355 0.39 -1.5 292,717 - AO353_01355 0.39 +1.5 292,969 + AO353_01355 0.59 -2.0 292,988 - AO353_01355 0.60 -1.7 293,007 + AO353_01355 0.62 -1.6 293,007 + AO353_01355 0.62 -0.8 293,007 + AO353_01355 0.62 +0.7 293,008 - AO353_01355 0.62 -2.0 293,008 - AO353_01355 0.62 -0.8 293,008 - AO353_01355 0.62 +0.2 293,008 - AO353_01355 0.62 -1.4 293,008 - AO353_01355 0.62 +2.1 293,011 + AO353_01355 0.62 -0.5 293,023 + AO353_01355 0.63 -0.4 293,056 + AO353_01355 0.66 -0.7 293,057 - AO353_01355 0.66 -0.5 293,057 - AO353_01355 0.66 -1.9 293,057 - AO353_01355 0.66 -0.8 293,180 - AO353_01355 0.76 -0.9 293,180 - AO353_01355 0.76 -0.3
Or see this region's nucleotide sequence