Experiment: Gly-DL-Asp (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_00510 and AO353_00515 are separated by 538 nucleotides AO353_00515 and AO353_00520 are separated by 104 nucleotides AO353_00520 and AO353_00525 are separated by 179 nucleotides
AO353_00510: AO353_00510 - multifunctional fatty acid oxidation complex subunit alpha, at 103,105 to 105,252
_00510
AO353_00515: AO353_00515 - hypothetical protein, at 105,791 to 106,228
_00515
AO353_00520: AO353_00520 - universal stress protein UspA, at 106,333 to 106,770
_00520
AO353_00525: AO353_00525 - ABC transporter ATP-binding protein, at 106,950 to 108,866
_00525
Position (kb)
105
106
107 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 104.817 kb on - strand, within AO353_00510 at 104.817 kb on - strand, within AO353_00510 at 105.061 kb on + strand at 105.061 kb on + strand at 105.061 kb on + strand at 105.062 kb on - strand at 105.062 kb on - strand at 105.062 kb on - strand at 105.133 kb on + strand at 105.133 kb on + strand at 105.134 kb on - strand at 105.134 kb on - strand at 105.134 kb on - strand at 105.134 kb on - strand at 105.134 kb on - strand at 105.134 kb on - strand at 105.237 kb on + strand at 105.237 kb on + strand at 105.238 kb on - strand at 105.245 kb on + strand at 105.245 kb on + strand at 105.245 kb on + strand at 105.245 kb on + strand at 105.245 kb on + strand at 105.246 kb on - strand at 105.285 kb on + strand at 105.285 kb on + strand at 105.285 kb on + strand at 105.286 kb on - strand at 105.325 kb on - strand at 105.337 kb on - strand at 105.372 kb on - strand at 105.385 kb on + strand at 105.398 kb on + strand at 105.398 kb on + strand at 105.399 kb on - strand at 105.399 kb on - strand at 105.401 kb on + strand at 105.401 kb on + strand at 105.402 kb on - strand at 105.402 kb on - strand at 105.402 kb on - strand at 105.402 kb on - strand at 105.554 kb on + strand at 105.554 kb on + strand at 105.554 kb on + strand at 105.554 kb on + strand at 105.555 kb on - strand at 105.555 kb on - strand at 105.560 kb on + strand at 105.560 kb on + strand at 105.560 kb on + strand at 105.561 kb on - strand at 105.561 kb on - strand at 105.570 kb on - strand at 105.570 kb on - strand at 105.570 kb on - strand at 105.573 kb on + strand at 105.587 kb on + strand at 105.587 kb on + strand at 105.588 kb on - strand at 105.588 kb on - strand at 105.588 kb on - strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.591 kb on + strand at 105.592 kb on - strand at 105.592 kb on - strand at 105.592 kb on - strand at 105.592 kb on - strand at 105.592 kb on - strand at 105.609 kb on + strand at 105.609 kb on + strand at 105.609 kb on + strand at 105.609 kb on + strand at 105.616 kb on + strand at 105.616 kb on + strand at 105.617 kb on - strand at 105.617 kb on - strand at 105.617 kb on - strand at 105.617 kb on - strand at 105.635 kb on - strand at 105.719 kb on - strand at 105.778 kb on + strand at 105.779 kb on - strand at 105.830 kb on + strand at 105.830 kb on + strand at 105.858 kb on + strand, within AO353_00515 at 105.858 kb on + strand, within AO353_00515 at 105.858 kb on + strand, within AO353_00515 at 105.858 kb on + strand, within AO353_00515 at 105.859 kb on - strand, within AO353_00515 at 105.894 kb on + strand, within AO353_00515 at 105.895 kb on - strand, within AO353_00515 at 105.895 kb on - strand, within AO353_00515 at 105.895 kb on - strand, within AO353_00515 at 105.895 kb on - strand, within AO353_00515 at 105.994 kb on - strand at 106.157 kb on - strand, within AO353_00515 at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.228 kb on + strand at 106.229 kb on - strand at 106.229 kb on - strand at 106.235 kb on - strand at 106.235 kb on - strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.296 kb on + strand at 106.297 kb on - strand at 106.297 kb on - strand at 106.297 kb on - strand at 106.297 kb on - strand at 106.300 kb on + strand at 106.300 kb on + strand at 106.300 kb on + strand at 106.347 kb on + strand at 106.347 kb on + strand at 106.347 kb on + strand at 106.347 kb on + strand at 106.347 kb on + strand at 106.348 kb on - strand at 106.348 kb on - strand at 106.348 kb on - strand at 106.348 kb on - strand at 106.348 kb on - strand at 106.361 kb on + strand at 106.361 kb on + strand at 106.368 kb on - strand at 106.368 kb on - strand at 106.368 kb on - strand at 106.446 kb on + strand, within AO353_00520 at 106.447 kb on - strand, within AO353_00520 at 106.447 kb on - strand, within AO353_00520 at 106.447 kb on - strand, within AO353_00520 at 106.447 kb on - strand, within AO353_00520 at 106.561 kb on + strand, within AO353_00520 at 106.561 kb on + strand, within AO353_00520 at 106.561 kb on + strand, within AO353_00520 at 106.582 kb on + strand, within AO353_00520 at 106.583 kb on - strand, within AO353_00520 at 106.598 kb on - strand, within AO353_00520 at 106.626 kb on + strand, within AO353_00520 at 106.626 kb on + strand, within AO353_00520 at 106.626 kb on + strand, within AO353_00520 at 106.626 kb on + strand, within AO353_00520 at 106.627 kb on - strand, within AO353_00520 at 106.627 kb on - strand, within AO353_00520 at 106.627 kb on - strand, within AO353_00520 at 106.772 kb on + strand at 106.772 kb on + strand at 106.772 kb on + strand at 106.772 kb on + strand at 106.772 kb on + strand at 106.772 kb on + strand at 106.773 kb on - strand at 106.773 kb on - strand at 106.773 kb on - strand at 106.795 kb on + strand at 106.795 kb on + strand at 106.795 kb on + strand at 106.795 kb on + strand at 106.795 kb on + strand at 106.796 kb on - strand at 106.796 kb on - strand at 106.796 kb on - strand at 106.796 kb on - strand at 106.826 kb on + strand at 106.827 kb on - strand at 106.827 kb on - strand at 106.880 kb on + strand at 106.880 kb on + strand at 106.880 kb on + strand at 106.881 kb on - strand at 106.916 kb on + strand at 106.916 kb on + strand at 106.917 kb on - strand at 106.983 kb on + strand at 106.984 kb on - strand at 106.984 kb on - strand at 107.053 kb on + strand at 107.053 kb on + strand at 107.053 kb on + strand at 107.054 kb on - strand at 107.054 kb on - strand at 107.054 kb on - strand at 107.054 kb on - strand at 107.152 kb on + strand, within AO353_00525 at 107.152 kb on + strand, within AO353_00525 at 107.152 kb on + strand, within AO353_00525 at 107.152 kb on + strand, within AO353_00525 at 107.152 kb on + strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525 at 107.153 kb on - strand, within AO353_00525
Per-strain Table
Position Strand Gene LocusTag Fraction Gly-DL-Asp (N) remove 104,817 - AO353_00510 0.80 -0.5 104,817 - AO353_00510 0.80 +0.3 105,061 + +1.1 105,061 + +0.7 105,061 + -0.4 105,062 - +1.3 105,062 - +0.0 105,062 - -0.2 105,133 + +0.3 105,133 + +0.6 105,134 - -0.3 105,134 - +1.4 105,134 - -0.0 105,134 - -0.3 105,134 - -0.4 105,134 - +1.5 105,237 + -1.2 105,237 + +1.8 105,238 - +0.3 105,245 + +0.9 105,245 + +0.9 105,245 + -0.8 105,245 + +0.4 105,245 + +0.5 105,246 - -1.3 105,285 + -0.5 105,285 + -1.0 105,285 + +1.5 105,286 - -0.3 105,325 - +1.9 105,337 - -1.1 105,372 - -0.1 105,385 + -0.0 105,398 + -0.3 105,398 + -0.1 105,399 - -0.7 105,399 - +0.2 105,401 + +0.1 105,401 + +0.4 105,402 - -2.4 105,402 - +0.1 105,402 - +1.9 105,402 - -0.9 105,554 + -1.6 105,554 + +0.5 105,554 + +1.5 105,554 + +1.2 105,555 - -1.1 105,555 - +1.8 105,560 + -0.3 105,560 + +1.6 105,560 + -0.6 105,561 - +0.5 105,561 - +0.1 105,570 - -1.0 105,570 - +1.5 105,570 - +1.9 105,573 + +2.0 105,587 + +0.5 105,587 + -0.6 105,588 - +0.6 105,588 - +0.1 105,588 - +0.1 105,591 + -0.6 105,591 + -0.9 105,591 + +0.4 105,591 + -0.8 105,591 + +0.6 105,591 + -0.9 105,591 + +1.1 105,591 + +0.7 105,591 + -0.3 105,591 + -0.7 105,592 - +1.2 105,592 - +0.7 105,592 - +1.1 105,592 - +0.4 105,592 - +0.0 105,609 + -0.2 105,609 + +1.1 105,609 + -0.5 105,609 + +0.5 105,616 + +0.6 105,616 + +0.1 105,617 - -0.1 105,617 - +0.7 105,617 - -0.4 105,617 - -1.6 105,635 - +1.3 105,719 - +1.3 105,778 + -1.6 105,779 - -1.0 105,830 + -0.5 105,830 + +0.1 105,858 + AO353_00515 0.15 +0.5 105,858 + AO353_00515 0.15 -1.4 105,858 + AO353_00515 0.15 -1.3 105,858 + AO353_00515 0.15 -1.6 105,859 - AO353_00515 0.16 -1.2 105,894 + AO353_00515 0.24 -2.2 105,895 - AO353_00515 0.24 -0.5 105,895 - AO353_00515 0.24 +1.2 105,895 - AO353_00515 0.24 +0.8 105,895 - AO353_00515 0.24 -1.2 105,994 - +2.5 106,157 - AO353_00515 0.84 -0.1 106,228 + +0.7 106,228 + -1.0 106,228 + -1.0 106,228 + -1.4 106,228 + +0.1 106,228 + -2.1 106,228 + -0.2 106,229 - -0.5 106,229 - -0.5 106,235 - +0.7 106,235 - -1.5 106,296 + -0.8 106,296 + -0.8 106,296 + -0.4 106,296 + -2.2 106,296 + +0.5 106,296 + +0.3 106,296 + +1.8 106,296 + +0.0 106,296 + +0.3 106,297 - -0.8 106,297 - -1.5 106,297 - -1.2 106,297 - +0.6 106,300 + -0.4 106,300 + -0.3 106,300 + -0.1 106,347 + +0.6 106,347 + +1.2 106,347 + +0.2 106,347 + -1.3 106,347 + -0.1 106,348 - -1.3 106,348 - -0.1 106,348 - -1.2 106,348 - -0.5 106,348 - +1.1 106,361 + +0.5 106,361 + -1.3 106,368 - +0.1 106,368 - +0.5 106,368 - -1.4 106,446 + AO353_00520 0.26 +0.0 106,447 - AO353_00520 0.26 -0.6 106,447 - AO353_00520 0.26 +0.4 106,447 - AO353_00520 0.26 -1.2 106,447 - AO353_00520 0.26 -1.7 106,561 + AO353_00520 0.52 -2.2 106,561 + AO353_00520 0.52 +0.1 106,561 + AO353_00520 0.52 -1.3 106,582 + AO353_00520 0.57 +1.7 106,583 - AO353_00520 0.57 -1.4 106,598 - AO353_00520 0.61 -1.8 106,626 + AO353_00520 0.67 -0.4 106,626 + AO353_00520 0.67 +0.5 106,626 + AO353_00520 0.67 +0.1 106,626 + AO353_00520 0.67 -1.1 106,627 - AO353_00520 0.67 -1.2 106,627 - AO353_00520 0.67 +0.3 106,627 - AO353_00520 0.67 -2.1 106,772 + -1.0 106,772 + +0.9 106,772 + -0.0 106,772 + -1.5 106,772 + +2.7 106,772 + +0.7 106,773 - -0.3 106,773 - -0.3 106,773 - +1.0 106,795 + +0.4 106,795 + +0.9 106,795 + -2.0 106,795 + +0.3 106,795 + +2.5 106,796 - +0.1 106,796 - -0.9 106,796 - +2.1 106,796 - +0.1 106,826 + -0.3 106,827 - -0.1 106,827 - +0.1 106,880 + +0.6 106,880 + -0.1 106,880 + +0.1 106,881 - +0.9 106,916 + -1.2 106,916 + +1.9 106,917 - +0.7 106,983 + -0.1 106,984 - -0.2 106,984 - +0.7 107,053 + +0.5 107,053 + +0.8 107,053 + -0.9 107,054 - +0.3 107,054 - -0.6 107,054 - +0.7 107,054 - +0.9 107,152 + AO353_00525 0.11 -1.8 107,152 + AO353_00525 0.11 +0.4 107,152 + AO353_00525 0.11 -0.9 107,152 + AO353_00525 0.11 -1.3 107,152 + AO353_00525 0.11 -2.3 107,153 - AO353_00525 0.11 +0.9 107,153 - AO353_00525 0.11 +0.0 107,153 - AO353_00525 0.11 -0.6 107,153 - AO353_00525 0.11 +0.2 107,153 - AO353_00525 0.11 -1.6 107,153 - AO353_00525 0.11 -0.3 107,153 - AO353_00525 0.11 -0.5
Or see this region's nucleotide sequence