Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS26040 and BWI76_RS26045 overlap by 4 nucleotides BWI76_RS26045 and BWI76_RS26050 are separated by 67 nucleotides BWI76_RS26050 and BWI76_RS26055 are separated by 11 nucleotides
BWI76_RS26040: BWI76_RS26040 - nitrite reductase large subunit, at 5,380,211 to 5,382,754
_RS26040
BWI76_RS26045: BWI76_RS26045 - nitrite reductase small subunit, at 5,382,751 to 5,383,077
_RS26045
BWI76_RS26050: BWI76_RS26050 - nitrite transporter NirC, at 5,383,145 to 5,383,954
_RS26050
BWI76_RS26055: BWI76_RS26055 - siroheme synthase, at 5,383,966 to 5,385,339
_RS26055
Position (kb) 5382
5383
5384 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 5381.777 kb on - strand, within BWI76_RS26040 at 5382.201 kb on - strand, within BWI76_RS26040 at 5382.236 kb on - strand, within BWI76_RS26040 at 5382.285 kb on - strand, within BWI76_RS26040 at 5382.342 kb on + strand, within BWI76_RS26040 at 5382.533 kb on - strand at 5382.859 kb on + strand, within BWI76_RS26045 at 5383.007 kb on - strand, within BWI76_RS26045 at 5383.017 kb on - strand, within BWI76_RS26045 at 5383.124 kb on + strand at 5383.182 kb on - strand at 5383.182 kb on - strand at 5383.254 kb on + strand, within BWI76_RS26050 at 5383.262 kb on - strand, within BWI76_RS26050 at 5383.346 kb on + strand, within BWI76_RS26050 at 5383.354 kb on - strand, within BWI76_RS26050 at 5383.436 kb on - strand, within BWI76_RS26050 at 5383.447 kb on - strand, within BWI76_RS26050 at 5383.629 kb on - strand, within BWI76_RS26050 at 5383.703 kb on + strand, within BWI76_RS26050 at 5383.765 kb on + strand, within BWI76_RS26050 at 5383.773 kb on - strand, within BWI76_RS26050 at 5383.773 kb on - strand, within BWI76_RS26050 at 5383.791 kb on + strand, within BWI76_RS26050 at 5383.791 kb on + strand, within BWI76_RS26050 at 5383.798 kb on - strand, within BWI76_RS26050 at 5383.827 kb on + strand, within BWI76_RS26050 at 5383.837 kb on + strand, within BWI76_RS26050 at 5384.040 kb on + strand at 5384.048 kb on - strand at 5384.048 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 5,381,777 - BWI76_RS26040 0.62 +0.1 5,382,201 - BWI76_RS26040 0.78 -0.1 5,382,236 - BWI76_RS26040 0.80 -0.5 5,382,285 - BWI76_RS26040 0.82 -0.5 5,382,342 + BWI76_RS26040 0.84 +0.6 5,382,533 - +1.0 5,382,859 + BWI76_RS26045 0.33 -0.2 5,383,007 - BWI76_RS26045 0.78 -2.4 5,383,017 - BWI76_RS26045 0.81 -1.4 5,383,124 + +1.8 5,383,182 - +0.6 5,383,182 - +0.8 5,383,254 + BWI76_RS26050 0.13 -1.4 5,383,262 - BWI76_RS26050 0.14 -0.3 5,383,346 + BWI76_RS26050 0.25 -1.1 5,383,354 - BWI76_RS26050 0.26 +0.5 5,383,436 - BWI76_RS26050 0.36 +0.8 5,383,447 - BWI76_RS26050 0.37 -1.4 5,383,629 - BWI76_RS26050 0.60 +1.6 5,383,703 + BWI76_RS26050 0.69 -0.9 5,383,765 + BWI76_RS26050 0.77 +0.9 5,383,773 - BWI76_RS26050 0.78 +0.3 5,383,773 - BWI76_RS26050 0.78 -0.0 5,383,791 + BWI76_RS26050 0.80 -0.8 5,383,791 + BWI76_RS26050 0.80 +0.4 5,383,798 - BWI76_RS26050 0.81 +0.6 5,383,827 + BWI76_RS26050 0.84 -0.7 5,383,837 + BWI76_RS26050 0.85 +0.2 5,384,040 + -3.0 5,384,048 - -1.8 5,384,048 - +0.2
Or see this region's nucleotide sequence