Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS22460 and BWI76_RS22465 overlap by 4 nucleotides BWI76_RS22465 and BWI76_RS22470 overlap by 1 nucleotides BWI76_RS22470 and BWI76_RS22475 overlap by 8 nucleotides BWI76_RS22475 and BWI76_RS22480 are separated by 96 nucleotides
BWI76_RS22460: BWI76_RS22460 - hemin-degrading factor, at 4,683,073 to 4,684,113
_RS22460
BWI76_RS22465: BWI76_RS22465 - hemin ABC transporter substrate-binding protein, at 4,684,110 to 4,684,928
_RS22465
BWI76_RS22470: BWI76_RS22470 - transporter permease, at 4,684,928 to 4,685,923
_RS22470
BWI76_RS22475: BWI76_RS22475 - heme ABC transporter ATP-binding protein, at 4,685,916 to 4,686,695
_RS22475
BWI76_RS22480: BWI76_RS22480 - lactaldehyde reductase, at 4,686,792 to 4,687,943
_RS22480
Position (kb)
4684
4685
4686 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4683.947 kb on - strand, within BWI76_RS22460 at 4684.023 kb on + strand at 4684.030 kb on + strand at 4684.031 kb on - strand at 4684.031 kb on - strand at 4684.067 kb on + strand at 4684.280 kb on - strand, within BWI76_RS22465 at 4684.360 kb on - strand at 4684.406 kb on + strand, within BWI76_RS22465 at 4684.519 kb on + strand, within BWI76_RS22465 at 4684.521 kb on - strand, within BWI76_RS22465 at 4684.663 kb on + strand, within BWI76_RS22465 at 4684.810 kb on - strand, within BWI76_RS22465 at 4684.872 kb on - strand at 4685.003 kb on - strand at 4685.172 kb on - strand, within BWI76_RS22470 at 4685.404 kb on + strand, within BWI76_RS22470 at 4685.513 kb on + strand, within BWI76_RS22470 at 4685.798 kb on + strand, within BWI76_RS22470 at 4686.110 kb on - strand, within BWI76_RS22475 at 4686.228 kb on + strand, within BWI76_RS22475 at 4686.468 kb on + strand, within BWI76_RS22475 at 4686.530 kb on + strand, within BWI76_RS22475 at 4686.576 kb on + strand, within BWI76_RS22475 at 4686.638 kb on + strand at 4686.654 kb on + strand at 4686.682 kb on + strand at 4686.685 kb on - strand at 4686.690 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 4,683,947 - BWI76_RS22460 0.84 +0.8 4,684,023 + +0.7 4,684,030 + -0.1 4,684,031 - +0.1 4,684,031 - -0.9 4,684,067 + -0.1 4,684,280 - BWI76_RS22465 0.21 +1.3 4,684,360 - -0.9 4,684,406 + BWI76_RS22465 0.36 +0.4 4,684,519 + BWI76_RS22465 0.50 -0.1 4,684,521 - BWI76_RS22465 0.50 -0.3 4,684,663 + BWI76_RS22465 0.68 +0.5 4,684,810 - BWI76_RS22465 0.85 +0.3 4,684,872 - -0.6 4,685,003 - +0.1 4,685,172 - BWI76_RS22470 0.24 -0.8 4,685,404 + BWI76_RS22470 0.48 -4.0 4,685,513 + BWI76_RS22470 0.59 -0.6 4,685,798 + BWI76_RS22470 0.87 +0.4 4,686,110 - BWI76_RS22475 0.25 -0.6 4,686,228 + BWI76_RS22475 0.40 +1.0 4,686,468 + BWI76_RS22475 0.71 -0.5 4,686,530 + BWI76_RS22475 0.79 +1.7 4,686,576 + BWI76_RS22475 0.85 -2.0 4,686,638 + -0.5 4,686,654 + -0.3 4,686,682 + -0.8 4,686,685 - +0.5 4,686,690 - +0.1
Or see this region's nucleotide sequence