Experiment: Inosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS21930 and BWI76_RS21935 overlap by 4 nucleotides BWI76_RS21935 and BWI76_RS21940 are separated by 64 nucleotides BWI76_RS21940 and BWI76_RS21945 are separated by 144 nucleotides
BWI76_RS21930: BWI76_RS21930 - LysR family transcriptional regulator, at 4,581,410 to 4,582,312
_RS21930
BWI76_RS21935: BWI76_RS21935 - MFS transporter, at 4,582,309 to 4,583,502
_RS21935
BWI76_RS21940: BWI76_RS21940 - SDR family oxidoreductase, at 4,583,567 to 4,584,343
_RS21940
BWI76_RS21945: BWI76_RS21945 - LysR family transcriptional regulator, at 4,584,488 to 4,585,408
_RS21945
Position (kb)
4582
4583
4584 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4581.404 kb on - strand at 4581.483 kb on - strand at 4581.506 kb on - strand, within BWI76_RS21930 at 4581.723 kb on + strand, within BWI76_RS21930 at 4581.811 kb on + strand at 4581.947 kb on + strand, within BWI76_RS21930 at 4582.053 kb on + strand, within BWI76_RS21930 at 4582.101 kb on + strand, within BWI76_RS21930 at 4582.148 kb on + strand, within BWI76_RS21930 at 4582.175 kb on - strand, within BWI76_RS21930 at 4582.253 kb on + strand at 4582.280 kb on - strand at 4582.771 kb on - strand, within BWI76_RS21935 at 4582.831 kb on + strand, within BWI76_RS21935 at 4582.831 kb on + strand, within BWI76_RS21935 at 4582.986 kb on - strand, within BWI76_RS21935 at 4583.084 kb on + strand, within BWI76_RS21935 at 4583.227 kb on + strand, within BWI76_RS21935 at 4583.323 kb on - strand, within BWI76_RS21935 at 4583.323 kb on - strand, within BWI76_RS21935 at 4583.652 kb on + strand at 4583.857 kb on - strand, within BWI76_RS21940 at 4583.974 kb on - strand, within BWI76_RS21940 at 4584.116 kb on - strand, within BWI76_RS21940 at 4584.350 kb on + strand at 4584.376 kb on + strand at 4584.386 kb on + strand at 4584.389 kb on - strand at 4584.394 kb on - strand at 4584.394 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Inosine (C) remove 4,581,404 - +0.9 4,581,483 - -0.8 4,581,506 - BWI76_RS21930 0.11 -0.5 4,581,723 + BWI76_RS21930 0.35 +1.1 4,581,811 + +1.7 4,581,947 + BWI76_RS21930 0.59 +0.3 4,582,053 + BWI76_RS21930 0.71 -1.1 4,582,101 + BWI76_RS21930 0.77 +0.1 4,582,148 + BWI76_RS21930 0.82 +0.0 4,582,175 - BWI76_RS21930 0.85 +0.2 4,582,253 + +0.7 4,582,280 - -2.4 4,582,771 - BWI76_RS21935 0.39 +0.3 4,582,831 + BWI76_RS21935 0.44 +1.2 4,582,831 + BWI76_RS21935 0.44 +2.6 4,582,986 - BWI76_RS21935 0.57 +1.1 4,583,084 + BWI76_RS21935 0.65 -0.4 4,583,227 + BWI76_RS21935 0.77 +1.1 4,583,323 - BWI76_RS21935 0.85 -0.0 4,583,323 - BWI76_RS21935 0.85 +0.2 4,583,652 + +1.7 4,583,857 - BWI76_RS21940 0.37 +0.4 4,583,974 - BWI76_RS21940 0.52 -1.4 4,584,116 - BWI76_RS21940 0.71 -0.3 4,584,350 + +0.8 4,584,376 + -0.9 4,584,386 + -1.9 4,584,389 - -1.2 4,584,394 - +0.3 4,584,394 - -0.2
Or see this region's nucleotide sequence