Strain Fitness in Klebsiella michiganensis M5al around BWI76_RS14515

Experiment: Inosine (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBWI76_RS14510 and BWI76_RS14515 overlap by 8 nucleotidesBWI76_RS14515 and BWI76_RS14520 overlap by 14 nucleotides BWI76_RS14510: BWI76_RS14510 - MFS transporter, at 3,029,846 to 3,031,126 _RS14510 BWI76_RS14515: BWI76_RS14515 - yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ, at 3,031,119 to 3,032,921 _RS14515 BWI76_RS14520: BWI76_RS14520 - hypothetical protein, at 3,032,908 to 3,034,710 _RS14520 Position (kb) 3031 3032 3033Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 3030.343 kb on - strand, within BWI76_RS14510at 3030.519 kb on + strand, within BWI76_RS14510at 3030.530 kb on + strand, within BWI76_RS14510at 3030.653 kb on + strand, within BWI76_RS14510at 3030.661 kb on - strand, within BWI76_RS14510at 3030.934 kb on - strand, within BWI76_RS14510at 3031.050 kb on - strandat 3031.217 kb on - strandat 3031.242 kb on - strandat 3031.512 kb on + strand, within BWI76_RS14515at 3031.573 kb on - strand, within BWI76_RS14515at 3032.035 kb on + strand, within BWI76_RS14515at 3032.187 kb on + strand, within BWI76_RS14515at 3032.386 kb on + strand, within BWI76_RS14515at 3032.660 kb on + strand, within BWI76_RS14515at 3032.668 kb on - strand, within BWI76_RS14515at 3032.713 kb on + strand, within BWI76_RS14515at 3032.836 kb on + strandat 3032.906 kb on + strandat 3032.938 kb on - strandat 3033.117 kb on - strand, within BWI76_RS14520at 3033.497 kb on - strand, within BWI76_RS14520

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Per-strain Table

Position Strand Gene LocusTag Fraction Inosine (C)
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3,030,343 - BWI76_RS14510 0.39 -0.0
3,030,519 + BWI76_RS14510 0.53 +0.4
3,030,530 + BWI76_RS14510 0.53 -0.6
3,030,653 + BWI76_RS14510 0.63 +0.1
3,030,661 - BWI76_RS14510 0.64 -0.1
3,030,934 - BWI76_RS14510 0.85 +3.0
3,031,050 - +1.6
3,031,217 - +0.3
3,031,242 - +1.3
3,031,512 + BWI76_RS14515 0.22 -2.9
3,031,573 - BWI76_RS14515 0.25 -1.5
3,032,035 + BWI76_RS14515 0.51 -1.0
3,032,187 + BWI76_RS14515 0.59 +0.4
3,032,386 + BWI76_RS14515 0.70 -0.3
3,032,660 + BWI76_RS14515 0.85 -1.4
3,032,668 - BWI76_RS14515 0.86 -0.4
3,032,713 + BWI76_RS14515 0.88 -1.4
3,032,836 + +0.4
3,032,906 + -0.6
3,032,938 - -3.5
3,033,117 - BWI76_RS14520 0.12 -0.5
3,033,497 - BWI76_RS14520 0.33 -0.4

Or see this region's nucleotide sequence