Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_16115

Experiment: D-Alanine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Alanine (N)
3,571,827	+		AO353_16110	0.83	-0.5
3,571,828	-		AO353_16110	0.83	-2.2
3,571,873	+		AO353_16110	0.84	-0.9
3,571,873	+		AO353_16110	0.84	+0.3
3,571,873	+		AO353_16110	0.84	+1.3
3,571,874	-		AO353_16110	0.84	+0.5
3,571,874	-		AO353_16110	0.84	-1.9
3,571,874	-		AO353_16110	0.84	+0.1
3,571,874	-		AO353_16110	0.84	-0.1
3,571,888	+		AO353_16110	0.85	+0.7
3,571,889	-		AO353_16110	0.85	-1.2
3,571,894	+		AO353_16110	0.85	-0.4
3,571,894	+		AO353_16110	0.85	+2.7
3,571,894	+		AO353_16110	0.85	+0.0
3,571,894	+		AO353_16110	0.85	-1.4
3,571,894	+		AO353_16110	0.85	+0.2
3,571,894	+		AO353_16110	0.85	+0.5
3,571,894	+		AO353_16110	0.85	+1.4
3,571,894	+		AO353_16110	0.85	-0.2
3,571,894	+		AO353_16110	0.85	-0.6
3,571,894	+		AO353_16110	0.85	+0.7
3,571,894	+		AO353_16110	0.85	-0.9
3,571,895	-		AO353_16110	0.85	+0.6
3,571,895	-		AO353_16110	0.85	-0.8
3,571,895	-		AO353_16110	0.85	+0.0
3,571,895	-		AO353_16110	0.85	-0.3
3,571,895	-		AO353_16110	0.85	-0.6
3,571,895	-		AO353_16110	0.85	+2.1
3,571,895	-		AO353_16110	0.85	-1.6
3,571,900	+		AO353_16110	0.85	+0.1
3,571,900	+		AO353_16110	0.85	+0.6
3,571,900	+		AO353_16110	0.85	-0.0
3,571,901	-		AO353_16110	0.85	+1.1
3,571,901	-		AO353_16110	0.85	-0.5
3,571,901	-		AO353_16110	0.85	+1.1
3,571,901	-		AO353_16110	0.85	+1.4
3,571,901	-		AO353_16110	0.85	-0.8
3,571,901	-		AO353_16110	0.85	-0.1
3,571,933	-		AO353_16110	0.86	+0.1
3,571,984	+		AO353_16110	0.88	-1.0
3,571,984	+		AO353_16110	0.88	-0.4
3,572,029	+		AO353_16110	0.89	-1.1
3,572,029	+		AO353_16110	0.89	-0.2
3,572,029	+		AO353_16110	0.89	-0.5
3,572,030	-		AO353_16110	0.89	-0.9
3,572,030	-		AO353_16110	0.89	+0.2
3,572,030	-		AO353_16110	0.89	+1.2
3,572,074	+				+0.0
3,572,074	+				-1.2
3,572,147	-				-1.2
3,572,198	+				-1.2
3,572,199	-				+2.7
3,572,241	-				-0.5
3,572,241	-				+0.3
3,572,247	+				+0.2
3,572,248	-				-1.9
3,572,248	-				+0.2
3,572,373	-				-0.7
3,572,373	-				-0.7
3,572,389	+				+2.3
3,572,389	+				-0.3
3,572,389	+				-0.4
3,572,389	+				+0.6
3,572,389	+				+1.4
3,572,389	+				+0.3
3,572,389	+				-0.9
3,572,389	+				-0.7
3,572,390	-				-0.3
3,572,390	-				-0.0
3,572,390	-				+1.7
3,572,390	-				-1.7
3,572,390	-				+0.9
3,572,390	-				+1.6
3,572,393	+				-0.4
3,572,393	+				-0.7
3,572,393	+				-0.6
3,572,393	+				+0.4
3,572,393	+				+2.3
3,572,393	+				+0.6
3,572,394	-				-1.0
3,572,394	-				-1.6
3,572,419	+				-0.4
3,572,419	+				-0.1
3,572,663	+				+0.6
3,572,663	+				+0.5
3,572,663	+				+0.1
3,572,664	-				-0.3
3,572,664	-				-0.1
3,572,753	+		AO353_16115	0.17	-0.3
3,572,753	+		AO353_16115	0.17	+0.8
3,572,754	-		AO353_16115	0.17	-1.3
3,572,754	-		AO353_16115	0.17	-0.9
3,572,754	-		AO353_16115	0.17	+0.9
3,572,789	-		AO353_16115	0.25	-1.0
3,572,844	+		AO353_16115	0.37	+1.3
3,572,844	+		AO353_16115	0.37	-0.6
3,572,844	+		AO353_16115	0.37	+1.7
3,572,844	+		AO353_16115	0.37	-0.7
3,572,845	-		AO353_16115	0.37	-0.1
3,572,845	-		AO353_16115	0.37	-0.1
3,572,845	-		AO353_16115	0.37	-0.5
3,572,850	+		AO353_16115	0.38	+1.6
3,572,851	-		AO353_16115	0.39	+0.7
3,572,851	-		AO353_16115	0.39	+0.1
3,572,862	+		AO353_16115	0.41	-0.2
3,572,999	-				-0.3
3,573,013	+		AO353_16115	0.74	-0.7
3,573,014	-		AO353_16115	0.74	+1.2
3,573,014	-		AO353_16115	0.74	-0.1
3,573,016	-		AO353_16115	0.75	-1.7
3,573,016	-		AO353_16115	0.75	+1.9
3,573,016	-		AO353_16115	0.75	+0.4
3,573,016	-		AO353_16115	0.75	+0.1
3,573,066	+		AO353_16115	0.85	+1.0
3,573,066	+		AO353_16115	0.85	+1.9
3,573,066	+		AO353_16115	0.85	-0.3
3,573,066	+		AO353_16115	0.85	+1.4
3,573,066	+		AO353_16115	0.85	-0.9
3,573,066	+		AO353_16115	0.85	+0.2
3,573,067	-		AO353_16115	0.86	+1.9
3,573,067	-		AO353_16115	0.86	-1.7
3,573,067	-		AO353_16115	0.86	+0.6
3,573,067	-		AO353_16115	0.86	-0.2
3,573,068	+		AO353_16115	0.86	+0.1
3,573,068	+		AO353_16115	0.86	-1.1
3,573,068	+		AO353_16115	0.86	+0.3
3,573,068	+		AO353_16115	0.86	+0.2
3,573,068	+		AO353_16115	0.86	+1.6
3,573,068	+		AO353_16115	0.86	+0.2
3,573,068	+		AO353_16115	0.86	-1.8
3,573,068	+		AO353_16115	0.86	+1.5
3,573,068	+		AO353_16115	0.86	+0.3
3,573,068	+		AO353_16115	0.86	+0.3
3,573,068	+		AO353_16115	0.86	+0.4
3,573,068	+		AO353_16115	0.86	-0.5
3,573,068	+		AO353_16115	0.86	+0.5
3,573,069	-		AO353_16115	0.86	-0.3
3,573,069	-		AO353_16115	0.86	-1.3
3,573,069	-		AO353_16115	0.86	+0.3
3,573,069	-		AO353_16115	0.86	-0.1
3,573,069	-		AO353_16115	0.86	+0.5
3,573,069	-		AO353_16115	0.86	+0.1
3,573,069	-		AO353_16115	0.86	+1.2
3,573,069	-		AO353_16115	0.86	-0.3
3,573,069	-		AO353_16115	0.86	+0.9
3,573,069	-		AO353_16115	0.86	+1.3
3,573,069	-		AO353_16115	0.86	+1.3
3,573,069	-		AO353_16115	0.86	+0.4
3,573,069	-		AO353_16115	0.86	+0.2
3,573,069	-		AO353_16115	0.86	+1.3
3,573,069	-		AO353_16115	0.86	-0.7
3,573,069	-		AO353_16115	0.86	-0.1
3,573,069	-		AO353_16115	0.86	+0.7
3,573,089	+				+0.5
3,573,089	+				+1.2
3,573,090	-				-0.5
3,573,090	-				+0.3
3,573,103	+				+0.3
3,573,146	+				+0.6
3,573,146	+				+0.6
3,573,146	+				+0.7
3,573,147	-				-0.6
3,573,147	-				-1.7
3,573,147	-				+0.1
3,573,170	+				-0.1
3,573,170	+				+0.4
3,573,170	+				-1.3
3,573,170	+				+1.3
3,573,170	+				-0.3
3,573,170	+				+0.5
3,573,171	-				+1.2
3,573,171	-				+0.8
3,573,171	-				-0.3
3,573,171	-				-0.1
3,573,171	-				+0.1
3,573,393	+				-0.2
3,573,394	-				+0.3
3,573,422	+				-0.1
3,573,423	-				-0.2
3,573,423	-				-0.5
3,573,429	+				+2.1
3,573,430	-				+1.7
3,573,430	-				+0.3
3,573,434	-				+0.1
3,573,465	+				+2.0
3,573,465	+				+1.4
3,573,466	-				-0.5
3,573,510	-				-1.3
3,573,596	+				+1.3
3,573,596	+				+0.9
3,573,596	+				+0.7
3,573,596	+				+1.4
3,573,596	+				+0.5
3,573,596	+				+2.1
3,573,596	+				+0.1
3,573,596	+				+0.6
3,573,596	+				+0.5
3,573,596	+				-0.7
3,573,596	+				+2.3
3,573,596	+				+0.4
3,573,596	+				+1.0
3,573,596	+				-0.4
3,573,596	+				+4.6
3,573,596	+				+1.2
3,573,596	+				+0.8
3,573,596	+				+0.5
3,573,596	+				+1.3
3,573,596	+				+1.5
3,573,596	+				+1.5
3,573,596	+				+1.3
3,573,596	+				+0.9
3,573,596	+				+1.1
3,573,596	+				+0.5
3,573,596	+				-0.1
3,573,596	+				+0.1
3,573,596	+				+1.2
3,573,596	+				+2.4
3,573,596	+				+0.9
3,573,596	+				+0.6
3,573,596	+				-0.1
3,573,596	+				+2.4
3,573,596	+				+0.8
3,573,596	+				+1.7
3,573,596	+				+3.3
3,573,596	+				+0.2
3,573,596	+				+1.4
3,573,596	+				+2.1
3,573,596	+				-0.4
3,573,597	-				+0.5
3,573,597	-				+0.1
3,573,597	-				-2.0
3,573,597	-				-0.8
3,573,597	-				-1.5
3,573,597	-				-1.1
3,573,597	-				+0.1
3,573,597	-				-0.1
3,573,597	-				+0.0
3,573,597	-				-0.5
3,573,597	-				+0.4
3,573,597	-				-1.7
3,573,597	-				-1.1
3,573,597	-				-0.9
3,573,597	-				-1.2
3,573,597	-				-0.4
3,573,597	-				-1.9
3,573,597	-				-2.0
3,573,597	-				-0.7
3,573,597	-				+1.8
3,573,597	-				-0.1
3,573,597	-				-2.1
3,573,597	-				-1.1
3,573,597	-				+0.3
3,573,597	-				-0.6
3,573,597	-				-0.9
3,573,597	-				-0.5
3,573,597	-				-1.5
3,573,597	-				-0.1
3,573,597	-				+0.3
3,573,597	-				+0.3
3,573,597	-				-0.7
3,573,597	-				-0.1
3,573,597	-				-0.7
3,573,597	-				+0.1
3,573,597	-				-2.2
3,573,597	-				-0.4
3,573,597	-				-0.7
3,573,597	-				-1.0
3,573,597	-				+1.4
3,573,597	-				-1.4
3,573,597	-				-1.4
3,573,597	-				+0.3
3,573,597	-				-0.4
3,573,597	-				-1.2
3,573,597	-				-1.7
3,573,642	+				+0.7
3,573,642	+				+1.4
3,573,642	+				-0.7
3,573,642	+				-0.4
3,573,642	+				+0.7
3,573,642	+				+0.9
3,573,642	+				+0.5
3,573,642	+				+1.9
3,573,643	-				+0.3
3,573,643	-				+0.4
3,573,643	-				-0.7
3,573,643	-				-0.1
3,573,643	-				-1.3
3,573,643	-				+0.3
3,573,643	-				-1.2
3,573,643	-				-1.1
3,573,643	-				-0.2
3,573,643	-				-1.9
3,573,646	+				+0.1
3,573,646	+				+1.1
3,573,646	+				+1.4
3,573,646	+				+0.4
3,573,646	+				+1.7
3,573,646	+				+0.3
3,573,646	+				+0.6
3,573,647	-				-0.9
3,573,647	-				-0.7
3,573,647	-				-0.7
3,573,647	-				+1.3
3,573,684	+				-1.4
3,573,685	-				+2.3
3,573,685	-				-0.1
3,573,685	-				-1.2
3,573,694	+				+0.5
3,573,695	-				+0.4
3,573,713	+				-0.6
3,573,713	+				+0.8
3,573,713	+				-0.7
3,573,713	+				+0.1
3,573,713	+				+0.6
3,573,713	+				-0.1
3,573,713	+				-0.7
3,573,713	+				+0.8
3,573,713	+				+1.8
3,573,713	+				-0.5
3,573,714	-				-0.9
3,573,714	-				-0.9
3,573,714	-				-1.3
3,573,714	-				-0.9
3,573,714	-				+0.4
3,573,714	-				+0.1
3,573,714	-				-3.0
3,573,714	-				-0.8
3,573,715	+				+0.8
3,573,716	-				-1.2
3,573,716	-				+0.0
3,573,722	+				+0.9
3,573,723	-				+1.2
3,573,739	+				-0.3
3,573,739	+				-0.3
3,573,739	+				-1.1
3,573,739	+				-0.1
3,573,739	+				-1.4
3,573,739	+				-0.1
3,573,744	+				-1.6
3,573,744	+				-0.9
3,573,745	-				-0.6
3,573,745	-				-2.1
3,573,745	-				-1.9
3,573,822	+				-3.0
3,573,822	+				+0.4
3,573,822	+				+0.4
3,573,823	-				-0.1
3,573,823	-				+0.3
3,573,823	-				-0.7
3,573,919	+		AO353_16120	0.12	-1.3
3,573,919	+		AO353_16120	0.12	-0.8
3,573,919	+		AO353_16120	0.12	-3.0
3,573,919	+		AO353_16120	0.12	-1.1
3,573,919	+		AO353_16120	0.12	-0.2
3,573,919	+		AO353_16120	0.12	-2.2
3,573,919	+		AO353_16120	0.12	+0.1
3,573,919	+		AO353_16120	0.12	-0.3
3,573,919	+		AO353_16120	0.12	-1.2
3,573,920	-		AO353_16120	0.12	-1.3
3,573,920	-		AO353_16120	0.12	-2.1
3,573,920	-		AO353_16120	0.12	+0.3
3,573,920	-		AO353_16120	0.12	-0.6
3,573,920	-		AO353_16120	0.12	-0.9
3,573,920	-		AO353_16120	0.12	-1.1
3,573,920	-		AO353_16120	0.12	-2.1
3,573,920	-		AO353_16120	0.12	-1.1
3,573,920	-		AO353_16120	0.12	-2.9
3,573,920	-		AO353_16120	0.12	-0.9
3,573,920	-		AO353_16120	0.12	-1.0
3,573,920	-		AO353_16120	0.12	-2.3
3,573,920	-		AO353_16120	0.12	+0.4
3,573,920	-		AO353_16120	0.12	-0.9
3,573,920	-		AO353_16120	0.12	-0.8
3,573,920	-		AO353_16120	0.12	-1.4
3,573,920	-		AO353_16120	0.12	-1.6
3,573,920	-		AO353_16120	0.12	-1.8
3,573,920	-		AO353_16120	0.12	-1.4
3,573,920	-		AO353_16120	0.12	-1.7
3,573,920	-		AO353_16120	0.12	+0.7
3,573,920	-		AO353_16120	0.12	-0.7
3,573,920	-		AO353_16120	0.12	-0.6
3,573,920	-		AO353_16120	0.12	-1.3
3,574,021	+		AO353_16120	0.19	-1.0
3,574,021	+		AO353_16120	0.19	-2.2
3,574,021	+		AO353_16120	0.19	-0.7
3,574,021	+		AO353_16120	0.19	-3.2
3,574,021	+		AO353_16120	0.19	-2.2
3,574,022	-		AO353_16120	0.20	-1.2
3,574,022	-		AO353_16120	0.20	+0.1
3,574,022	-		AO353_16120	0.20	-0.2
3,574,022	-		AO353_16120	0.20	-1.7
3,574,060	+		AO353_16120	0.22	-0.7
3,574,060	+		AO353_16120	0.22	+0.2
3,574,060	+		AO353_16120	0.22	-1.6
3,574,061	-		AO353_16120	0.22	-1.7
3,574,061	-		AO353_16120	0.22	-0.1
3,574,061	-		AO353_16120	0.22	+1.1
3,574,061	-		AO353_16120	0.22	-0.1
3,574,099	-		AO353_16120	0.25	-0.9
3,574,114	+		AO353_16120	0.26	-0.2
3,574,114	+		AO353_16120	0.26	-1.0
3,574,114	+		AO353_16120	0.26	-0.5
3,574,114	+		AO353_16120	0.26	-1.7
3,574,114	+		AO353_16120	0.26	-1.6
3,574,114	+		AO353_16120	0.26	-1.6
3,574,114	+		AO353_16120	0.26	+0.1
3,574,114	+		AO353_16120	0.26	-2.1
3,574,114	+		AO353_16120	0.26	-1.4
3,574,114	+		AO353_16120	0.26	-1.1
3,574,114	+		AO353_16120	0.26	-1.1
3,574,114	+		AO353_16120	0.26	-0.6
3,574,115	-		AO353_16120	0.26	-0.2
3,574,115	-		AO353_16120	0.26	+0.3
3,574,115	-		AO353_16120	0.26	-1.1
3,574,115	-		AO353_16120	0.26	-0.7
3,574,115	-		AO353_16120	0.26	-1.7
3,574,115	-		AO353_16120	0.26	+0.1
3,574,115	-		AO353_16120	0.26	+0.3
3,574,115	-		AO353_16120	0.26	-1.7
3,574,115	-		AO353_16120	0.26	-2.1