Strain Fitness in Dechlorosoma suillum PS around Dsui_3356

Experiment: ALP with nitrate 75 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with nitrate 75 mM
3,596,350	-				+0.6
3,596,358	+		Dsui_3355	0.76	-0.4
3,596,360	-		Dsui_3355	0.76	-0.4
3,596,366	+		Dsui_3355	0.76	-1.6
3,596,366	+		Dsui_3355	0.76	+0.6
3,596,366	+		Dsui_3355	0.76	-0.4
3,596,366	+		Dsui_3355	0.76	-0.4
3,596,366	-		Dsui_3355	0.76	-0.4
3,596,372	+		Dsui_3355	0.76	+2.2
3,596,374	-		Dsui_3355	0.76	-0.4
3,596,374	-		Dsui_3355	0.76	-0.4
3,596,374	-		Dsui_3355	0.76	+0.6
3,596,375	-		Dsui_3355	0.77	+0.6
3,596,385	+		Dsui_3355	0.77	-0.4
3,596,390	+		Dsui_3355	0.77	-0.4
3,596,390	+		Dsui_3355	0.77	-2.6
3,596,390	+		Dsui_3355	0.77	-0.4
3,596,390	+		Dsui_3355	0.77	-0.4
3,596,390	+		Dsui_3355	0.77	-0.9
3,596,392	+		Dsui_3355	0.77	-0.5
3,596,392	+		Dsui_3355	0.77	-1.0
3,596,393	-		Dsui_3355	0.77	-0.8
3,596,397	+		Dsui_3355	0.77	-0.6
3,596,397	+		Dsui_3355	0.77	-1.0
3,596,397	+		Dsui_3355	0.77	-2.7
3,596,397	+		Dsui_3355	0.77	-0.4
3,596,398	-		Dsui_3355	0.77	-2.0
3,596,398	-		Dsui_3355	0.77	+0.6
3,596,398	-		Dsui_3355	0.77	+0.6
3,596,398	-		Dsui_3355	0.77	+0.6
3,596,398	-		Dsui_3355	0.77	+0.6
3,596,400	-		Dsui_3355	0.77	+0.6
3,596,400	-		Dsui_3355	0.77	-0.4
3,596,400	-		Dsui_3355	0.77	+0.6
3,596,402	+		Dsui_3355	0.78	+0.6
3,596,402	+		Dsui_3355	0.78	-1.4
3,596,402	+		Dsui_3355	0.78	+0.6
3,596,402	+		Dsui_3355	0.78	-1.7
3,596,405	-		Dsui_3355	0.78	-0.4
3,596,405	-		Dsui_3355	0.78	-1.0
3,596,405	-		Dsui_3355	0.78	-1.4
3,596,405	-				+0.6
3,596,410	-		Dsui_3355	0.78	-0.4
3,596,410	-		Dsui_3355	0.78	+0.6
3,596,434	+		Dsui_3355	0.79	+1.2
3,596,442	-		Dsui_3355	0.79	+0.6
3,596,444	-		Dsui_3355	0.79	-0.4
3,596,450	+		Dsui_3355	0.79	-0.4
3,596,450	+		Dsui_3355	0.79	+0.0
3,596,451	+		Dsui_3355	0.79	+2.2
3,596,451	+		Dsui_3355	0.79	-2.2
3,596,455	+		Dsui_3355	0.79	-1.5
3,596,455	+		Dsui_3355	0.79	-0.5
3,596,458	-		Dsui_3355	0.80	+0.6
3,596,459	-				-0.4
3,596,461	+		Dsui_3355	0.80	-0.6
3,596,461	+		Dsui_3355	0.80	-0.2
3,596,463	-		Dsui_3355	0.80	-1.7
3,596,463	-		Dsui_3355	0.80	-1.0
3,596,467	+		Dsui_3355	0.80	-1.4
3,596,468	-		Dsui_3355	0.80	-2.2
3,596,471	+		Dsui_3355	0.80	-0.4
3,596,471	+		Dsui_3355	0.80	+0.6
3,596,471	+		Dsui_3355	0.80	-0.7
3,596,471	+		Dsui_3355	0.80	+0.6
3,596,473	-		Dsui_3355	0.80	-0.4
3,596,479	-		Dsui_3355	0.80	+0.6
3,596,481	+		Dsui_3355	0.80	+0.6
3,596,493	+		Dsui_3355	0.81	-2.0
3,596,493	+		Dsui_3355	0.81	-0.8
3,596,493	+		Dsui_3355	0.81	+0.6
3,596,501	-		Dsui_3355	0.81	-1.4
3,596,501	-		Dsui_3355	0.81	+0.6
3,596,512	+		Dsui_3355	0.82	-1.6
3,596,512	+		Dsui_3355	0.82	+2.2
3,596,519	-		Dsui_3355	0.82	-1.0
3,596,520	-		Dsui_3355	0.82	+0.6
3,596,520	-		Dsui_3355	0.82	+0.6
3,596,534	-		Dsui_3355	0.82	+0.6
3,596,557	+		Dsui_3355	0.83	-0.4
3,596,566	+		Dsui_3355	0.84	+0.6
3,596,573	+		Dsui_3355	0.84	-0.4
3,596,574	-		Dsui_3355	0.84	+0.6
3,596,574	-		Dsui_3355	0.84	+0.6
3,596,574	-		Dsui_3355	0.84	-1.2
3,596,595	+		Dsui_3355	0.85	+1.6
3,596,597	+		Dsui_3355	0.85	+0.6
3,596,599	-		Dsui_3355	0.85	-0.4
3,596,599	-		Dsui_3355	0.85	+0.6
3,596,614	+		Dsui_3355	0.85	+0.6
3,596,614	+		Dsui_3355	0.85	+0.1
3,596,622	+		Dsui_3355	0.86	-1.3
3,596,622	+		Dsui_3355	0.86	-2.0
3,596,622	+		Dsui_3355	0.86	-1.4
3,596,622	+		Dsui_3355	0.86	-1.0
3,596,622	-		Dsui_3355	0.86	+0.6
3,596,622	-		Dsui_3355	0.86	-3.1
3,596,630	+		Dsui_3355	0.86	-1.7
3,596,630	+		Dsui_3355	0.86	+0.0
3,596,630	+		Dsui_3355	0.86	-0.4
3,596,630	+		Dsui_3355	0.86	+0.6
3,596,630	+		Dsui_3355	0.86	-0.6
3,596,630	+		Dsui_3355	0.86	+0.6
3,596,630	+		Dsui_3355	0.86	-0.8
3,596,630	+		Dsui_3355	0.86	-0.4
3,596,630	+		Dsui_3355	0.86	-0.7
3,596,630	+		Dsui_3355	0.86	+0.6
3,596,630	+		Dsui_3355	0.86	-0.5
3,596,630	-		Dsui_3355	0.86	-0.4
3,596,630	-		Dsui_3355	0.86	+0.6
3,596,638	-		Dsui_3355	0.86	+0.6
3,596,638	-		Dsui_3355	0.86	-0.4
3,596,638	-		Dsui_3355	0.86	-1.7
3,596,638	-		Dsui_3355	0.86	+0.6
3,596,638	-		Dsui_3355	0.86	-1.7
3,596,638	-		Dsui_3355	0.86	-1.0
3,596,638	-		Dsui_3355	0.86	-0.4
3,596,642	-		Dsui_3355	0.86	+0.6
3,596,644	+		Dsui_3355	0.86	-1.4
3,596,648	-		Dsui_3355	0.87	-0.4
3,596,649	-		Dsui_3355	0.87	+0.6
3,596,676	+		Dsui_3355	0.88	-0.4
3,596,705	-		Dsui_3355	0.89	-1.0
3,596,708	-		Dsui_3355	0.89	-0.4
3,596,715	-		Dsui_3355	0.89	-2.4
3,596,733	+		Dsui_3355	0.90	-0.1
3,596,733	+		Dsui_3355	0.90	-1.0
3,596,740	-		Dsui_3355	0.90	+0.6
3,596,766	+				-0.4
3,596,771	+				-0.3
3,596,774	-				-0.4
3,596,774	-				-0.4
3,596,780	-				+0.6
3,596,786	+				+0.6
3,596,786	+				+0.6
3,596,786	+				-0.4
3,596,786	+				-0.3
3,596,790	+				+1.6
3,596,793	-				+0.6
3,596,794	-				-0.4
3,596,794	-				+0.6
3,596,794	-				-0.4
3,596,798	-				+0.6
3,596,804	-				+0.6
3,596,804	-				-0.4
3,596,805	+				+1.0
3,596,813	-				-0.4
3,596,813	-				+0.6
3,596,814	+				+0.6
3,596,820	+				-0.5
3,596,835	-				-0.4
3,596,838	+				-0.4
3,596,838	+				+0.6
3,596,846	-				-0.4
3,596,846	-				-0.4
3,596,846	-				-1.7
3,596,856	+				+2.2
3,596,861	+				-0.6
3,596,862	+				-0.4
3,596,862	+				+0.2
3,596,862	+				+0.1
3,596,862	+				+0.6
3,596,869	-				+0.6
3,596,869	-				-1.7
3,596,869	-				-0.4
3,596,870	-				+0.6
3,596,870	-				-1.4
3,596,871	+				+0.3
3,596,877	+				-1.5
3,596,884	-				-0.4
3,596,886	+				-1.0
3,596,886	+				-1.4
3,596,887	+				+0.1
3,596,894	-				-0.4
3,596,900	-				-0.4
3,596,905	+				+1.6
3,596,917	+				-0.6
3,596,917	+				-0.1
3,596,917	+				-1.5
3,596,925	-				-0.4
3,596,925	-				-2.0
3,596,930	-				-0.4
3,596,941	-				-0.4
3,596,941	-				-0.4
3,596,944	+				-1.9
3,596,967	+				-0.3
3,596,968	+				-0.4
3,596,973	+				-0.5
3,596,973	+				+0.6
3,596,973	+				-0.5
3,596,973	+				-1.0
3,596,973	+				-2.6
3,596,974	-				+0.6
3,596,975	-				+0.6
3,596,976	-				-0.4
3,596,976	-				+0.6
3,596,976	-				+0.6
3,596,978	+				-1.0
3,596,981	-				-1.0
3,596,983	-				-1.0
3,597,014	-				-0.4
3,597,016	+				-0.8
3,597,023	+				+1.1
3,597,050	+				-2.0
3,597,058	-				-1.4
3,597,061	+				+0.6
3,597,087	-				+0.6
3,597,087	-				+1.0
3,597,129	+				-0.3
3,597,129	+				-1.0
3,597,129	-				-2.2
3,597,134	+				-0.1
3,597,137	-				-1.0
3,597,139	+				-0.4
3,597,156	+				-0.7
3,597,168	+				-0.7
3,597,168	+				-0.4
3,597,170	-				-2.6
3,597,176	-				-1.4
3,597,176	-				+0.6
3,597,176	-				+0.6
3,597,176	-				-0.4
3,597,176	-				-1.7
3,597,176	-				-2.6
3,597,177	+				-0.6
3,597,181	-				-2.0
3,597,195	+				-0.4
3,597,383	+				+0.6
3,597,387	-				-2.1
3,597,415	+				+0.6
3,597,416	+				-1.4
3,597,416	+				+0.6
3,597,429	-				-0.4
3,597,429	-				+0.1
3,597,477	-				-1.4
3,597,488	-		Dsui_3356	0.10	-2.9
3,597,488	-		Dsui_3356	0.10	+0.0
3,597,523	-		Dsui_3356	0.13	+0.6
3,597,527	+		Dsui_3356	0.13	+0.6
3,597,532	+		Dsui_3356	0.13	-0.4
3,597,566	+		Dsui_3356	0.16	-1.4
3,597,569	+		Dsui_3356	0.16	-0.4
3,597,577	-		Dsui_3356	0.16	+1.9
3,597,584	+		Dsui_3356	0.17	-1.7
3,597,653	+		Dsui_3356	0.22	-1.4
3,597,653	+		Dsui_3356	0.22	-1.4
3,597,655	-		Dsui_3356	0.22	-0.4
3,597,662	-		Dsui_3356	0.22	+0.6
3,597,700	-		Dsui_3356	0.25	+0.6
3,597,700	-		Dsui_3356	0.25	-1.4
3,597,733	+		Dsui_3356	0.28	-0.4
3,597,733	+				+0.6
3,597,746	-		Dsui_3356	0.28	-1.0
3,597,807	+		Dsui_3356	0.33	-1.7
3,597,809	+				+0.6
3,597,809	+		Dsui_3356	0.33	-0.4
3,597,822	+		Dsui_3356	0.34	-1.0
3,597,867	+		Dsui_3356	0.37	+0.6
3,597,936	+		Dsui_3356	0.42	+0.6
3,597,964	+		Dsui_3356	0.44	+0.6
3,598,002	+		Dsui_3356	0.47	-0.4
3,598,046	-		Dsui_3356	0.50	-1.0
3,598,130	+				+0.6
3,598,170	+		Dsui_3356	0.59	+0.6
3,598,252	+				-0.4
3,598,313	+		Dsui_3356	0.69	+0.6
3,598,313	+		Dsui_3356	0.69	+0.6
3,598,315	+		Dsui_3356	0.69	-2.9
3,598,319	+		Dsui_3356	0.69	+0.6
3,598,323	-		Dsui_3356	0.70	-0.4
3,598,346	-		Dsui_3356	0.71	+0.6
3,598,346	-		Dsui_3356	0.71	-0.2
3,598,348	+				+0.6
3,598,354	+		Dsui_3356	0.72	+0.6
3,598,356	-		Dsui_3356	0.72	+0.6
3,598,397	+		Dsui_3356	0.75	+0.6
3,598,412	-		Dsui_3356	0.76	+0.6
3,598,429	-		Dsui_3356	0.77	-0.4
3,598,441	+		Dsui_3356	0.78	+0.1
3,598,495	-		Dsui_3356	0.82	+0.6
3,598,497	+		Dsui_3356	0.82	-1.4
3,598,500	-		Dsui_3356	0.82	-1.0
3,598,505	-		Dsui_3356	0.83	+0.6
3,598,505	-		Dsui_3356	0.83	-0.4
3,598,553	+		Dsui_3356	0.86	-1.0
3,598,566	+		Dsui_3356	0.87	-0.7
3,598,574	+		Dsui_3356	0.88	-1.4
3,598,593	+		Dsui_3356	0.89	+0.6
3,598,616	+				-0.4
3,598,627	+				-1.7
3,598,653	-				-1.7
3,598,655	+				+0.6
3,598,688	-				+0.6
3,598,705	+				-1.4
3,598,736	-				-0.4
3,598,736	-				+0.6
3,598,833	-		Dsui_3357	0.14	-1.7
3,598,862	-		Dsui_3357	0.21	-1.0
3,598,865	+		Dsui_3357	0.21	-0.4
3,598,873	-		Dsui_3357	0.23	-0.4
3,598,909	+		Dsui_3357	0.31	-1.0
3,598,918	-		Dsui_3357	0.33	-2.2
3,598,941	-				+0.6
3,598,941	-		Dsui_3357	0.38	+0.6
3,598,970	-		Dsui_3357	0.44	-1.0
3,598,998	+		Dsui_3357	0.50	-0.4
3,599,060	-		Dsui_3357	0.63	-0.4
3,599,099	-		Dsui_3357	0.72	+0.6
3,599,103	-		Dsui_3357	0.73	-0.4
3,599,121	-		Dsui_3357	0.77	-1.0
3,599,143	+		Dsui_3357	0.81	-2.0
3,599,164	+		Dsui_3357	0.86	+0.6
3,599,172	-		Dsui_3357	0.88	-0.4
3,599,214	+				-0.4
3,599,222	-				+0.6
3,599,261	+				+0.6
3,599,272	+				-0.4
3,599,357	-		Dsui_3358	0.14	-0.4
3,599,363	-		Dsui_3358	0.15	+0.6
3,599,405	-		Dsui_3358	0.21	-1.0
3,599,484	+		Dsui_3358	0.31	+0.6
3,599,573	+		Dsui_3358	0.42	+0.6
3,599,573	+		Dsui_3358	0.42	+0.6
3,599,594	+		Dsui_3358	0.45	+0.6
3,599,605	+		Dsui_3358	0.46	-0.4
3,599,649	+		Dsui_3358	0.52	+0.6
3,599,683	-		Dsui_3358	0.56	+0.6
3,599,711	-		Dsui_3358	0.60	-0.4
3,599,747	-		Dsui_3358	0.65	+0.6