Experiment: ALP with nitrate 75 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2668 and Dsui_2669 are separated by 115 nucleotides Dsui_2669 and Dsui_2670 are separated by 89 nucleotides
Dsui_2668: Dsui_2668 - putative phosphatase, at 2,819,444 to 2,821,390
_2668
Dsui_2669: Dsui_2669 - ankyrin repeat-containing protein, at 2,821,506 to 2,822,252
_2669
Dsui_2670: Dsui_2670 - GMP synthase (glutamine-hydrolyzing), at 2,822,342 to 2,823,976
_2670
Position (kb)
2821
2822
2823 Strain fitness (log2 ratio)
-2
-1
0
1 at 2820.622 kb on - strand at 2820.653 kb on + strand, within Dsui_2668 at 2820.653 kb on + strand at 2820.665 kb on + strand at 2820.666 kb on - strand at 2820.692 kb on + strand at 2821.125 kb on + strand at 2821.339 kb on + strand at 2821.546 kb on + strand at 2821.638 kb on - strand at 2821.655 kb on + strand, within Dsui_2669 at 2821.824 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.831 kb on + strand, within Dsui_2669 at 2821.893 kb on - strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.924 kb on + strand, within Dsui_2669 at 2821.929 kb on + strand, within Dsui_2669 at 2822.075 kb on - strand at 2822.135 kb on - strand, within Dsui_2669 at 2822.135 kb on - strand, within Dsui_2669 at 2822.185 kb on - strand at 2822.241 kb on + strand at 2822.303 kb on + strand at 2822.311 kb on - strand at 2822.311 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with nitrate 75 mM remove 2,820,622 - -0.4 2,820,653 + Dsui_2668 0.62 -0.4 2,820,653 + +0.6 2,820,665 + -0.4 2,820,666 - +0.6 2,820,692 + -0.4 2,821,125 + +0.6 2,821,339 + -0.4 2,821,546 + -0.2 2,821,638 - +0.6 2,821,655 + Dsui_2669 0.20 +0.6 2,821,824 + Dsui_2669 0.43 -2.2 2,821,831 + Dsui_2669 0.44 -1.5 2,821,831 + Dsui_2669 0.44 -1.4 2,821,831 + Dsui_2669 0.44 -1.4 2,821,831 + Dsui_2669 0.44 -1.7 2,821,893 - Dsui_2669 0.52 -0.4 2,821,924 + Dsui_2669 0.56 -0.9 2,821,924 + Dsui_2669 0.56 -1.4 2,821,924 + Dsui_2669 0.56 -1.7 2,821,929 + Dsui_2669 0.57 -0.4 2,822,075 - +0.6 2,822,135 - Dsui_2669 0.84 -0.4 2,822,135 - Dsui_2669 0.84 -0.4 2,822,185 - +0.6 2,822,241 + -1.3 2,822,303 + +0.6 2,822,311 - +0.2 2,822,311 - +0.4
Or see this region's nucleotide sequence