Strain Fitness in Dechlorosoma suillum PS around Dsui_1478

Experiment: ALP with nitrate 75 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_1477 and Dsui_1478 overlap by 4 nucleotides Dsui_1477: Dsui_1477 - hypothetical protein, at 1,540,888 to 1,543,035 _1477 Dsui_1478: Dsui_1478 - hypothetical protein, at 1,543,032 to 1,543,517 _1478 Position (kb) 1543 1544Strain fitness (log2 ratio) -3 -2 -1 0 1at 1542.106 kb on - strand, within Dsui_1477at 1542.198 kb on - strand, within Dsui_1477at 1542.208 kb on - strand, within Dsui_1477at 1542.240 kb on - strand, within Dsui_1477at 1542.263 kb on + strand, within Dsui_1477at 1542.325 kb on - strand, within Dsui_1477at 1542.357 kb on + strand, within Dsui_1477at 1542.407 kb on - strand, within Dsui_1477at 1542.437 kb on + strand, within Dsui_1477at 1542.473 kb on + strand, within Dsui_1477at 1542.481 kb on - strand, within Dsui_1477at 1542.606 kb on + strand, within Dsui_1477at 1542.809 kb on + strand, within Dsui_1477at 1542.907 kb on - strandat 1542.907 kb on - strandat 1542.999 kb on + strandat 1543.043 kb on + strandat 1543.051 kb on - strandat 1543.171 kb on - strand, within Dsui_1478at 1543.500 kb on - strandat 1543.628 kb on - strandat 1543.776 kb on - strandat 1543.859 kb on - strandat 1543.943 kb on - strandat 1543.961 kb on - strandat 1543.964 kb on - strandat 1544.077 kb on + strandat 1544.085 kb on - strandat 1544.111 kb on + strandat 1544.111 kb on - strandat 1544.208 kb on - strandat 1544.249 kb on - strandat 1544.249 kb on - strandat 1544.337 kb on - strandat 1544.362 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with nitrate 75 mM
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1,542,106 - Dsui_1477 0.57 -2.1
1,542,198 - Dsui_1477 0.61 +0.5
1,542,208 - Dsui_1477 0.61 +0.5
1,542,240 - Dsui_1477 0.63 +0.5
1,542,263 + Dsui_1477 0.64 -0.6
1,542,325 - Dsui_1477 0.67 -1.1
1,542,357 + Dsui_1477 0.68 -0.4
1,542,407 - Dsui_1477 0.71 +0.5
1,542,437 + Dsui_1477 0.72 -0.2
1,542,473 + Dsui_1477 0.74 -0.6
1,542,481 - Dsui_1477 0.74 +0.5
1,542,606 + Dsui_1477 0.80 -0.4
1,542,809 + Dsui_1477 0.89 -0.2
1,542,907 - +0.5
1,542,907 - +0.5
1,542,999 + -0.2
1,543,043 + -0.1
1,543,051 - -0.5
1,543,171 - Dsui_1478 0.29 -0.5
1,543,500 - -1.1
1,543,628 - +0.5
1,543,776 - +0.5
1,543,859 - +0.5
1,543,943 - +0.5
1,543,961 - -2.8
1,543,964 - +0.5
1,544,077 + -1.1
1,544,085 - -1.1
1,544,111 + -0.5
1,544,111 - +0.5
1,544,208 - -0.5
1,544,249 - +0.5
1,544,249 - +0.5
1,544,337 - +0.5
1,544,362 + -0.5

Or see this region's nucleotide sequence