Strain Fitness in Dechlorosoma suillum PS around Dsui_1143

Experiment: ALP with nitrate 75 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with nitrate 75 mM
1,195,118	-				-1.7
1,195,141	+				-3.2
1,195,181	-				+0.4
1,195,186	-				-0.6
1,195,186	-				-1.9
1,195,234	+				-0.9
1,195,249	-				-0.8
1,195,279	+				-0.6
1,195,279	+				+0.4
1,195,279	+				-2.2
1,195,279	+				-1.6
1,195,285	-				-0.6
1,195,287	-				+0.4
1,195,295	-				+0.4
1,195,338	+				-1.6
1,195,338	+				-2.2
1,195,366	+				-0.6
1,195,366	+				+0.4
1,195,366	+				-1.2
1,195,366	+				-1.2
1,195,366	+				+0.4
1,195,374	-				-2.7
1,195,374	-				-0.6
1,195,374	-				+0.4
1,195,376	+				-1.2
1,195,376	+				+0.4
1,195,397	+				-2.2
1,195,405	-				-2.9
1,195,412	+				+0.4
1,195,422	+				+0.4
1,195,449	+				-1.6
1,195,457	-				-0.6
1,195,457	-				-1.2
1,195,524	+				-1.7
1,195,542	+				+0.4
1,195,557	-				+0.4
1,195,562	-				-0.6
1,195,584	-				+0.4
1,195,586	-				+0.4
1,195,586	-				-3.2
1,195,595	+				-2.2
1,195,595	+				-1.2
1,195,595	+				+0.4
1,195,595	+				+0.4
1,195,595	+				+0.4
1,195,595	+				+0.4
1,195,597	+				+0.4
1,195,600	+				-0.6
1,195,603	-				-1.2
1,195,603	-				-1.2
1,195,603	-				-1.2
1,195,603	-				-0.6
1,195,603	-				+0.4
1,195,603	-				-0.6
1,195,603	-				+0.4
1,195,603	-				+0.4
1,195,604	-				-2.6
1,195,606	+				+0.4
1,195,615	-				+0.4
1,195,620	-				+0.4
1,195,647	+		Dsui_1142	0.10	+0.4
1,195,647	+		Dsui_1142	0.10	-0.6
1,195,655	-		Dsui_1142	0.12	+0.4
1,195,697	-		Dsui_1142	0.20	+0.4
1,195,709	+		Dsui_1142	0.23	+0.4
1,195,737	+		Dsui_1142	0.28	+0.4
1,195,737	+		Dsui_1142	0.28	-2.2
1,195,737	+		Dsui_1142	0.28	-1.2
1,195,737	+		Dsui_1142	0.28	-1.2
1,195,737	+		Dsui_1142	0.28	+0.4
1,195,737	+		Dsui_1142	0.28	-1.2
1,195,737	+		Dsui_1142	0.28	-1.9
1,195,745	-		Dsui_1142	0.30	+0.4
1,195,745	-		Dsui_1142	0.30	-1.4
1,195,745	-		Dsui_1142	0.30	+0.4
1,195,745	-		Dsui_1142	0.30	-1.2
1,195,745	-		Dsui_1142	0.30	+0.4
1,195,746	+		Dsui_1142	0.30	+0.4
1,195,795	+		Dsui_1142	0.40	+0.4
1,195,800	+		Dsui_1142	0.41	-1.2
1,195,826	-		Dsui_1142	0.47	-2.6
1,195,834	-		Dsui_1142	0.48	+0.4
1,195,848	-		Dsui_1142	0.51	-2.4
1,195,859	-		Dsui_1142	0.53	-1.2
1,195,892	+		Dsui_1142	0.60	-0.3
1,195,898	-		Dsui_1142	0.61	-0.6
1,195,902	+		Dsui_1142	0.62	+0.4
1,195,917	-		Dsui_1142	0.65	-1.9
1,195,922	+		Dsui_1142	0.66	+0.4
1,195,948	+		Dsui_1142	0.72	+0.4
1,195,956	-		Dsui_1142	0.73	-1.2
1,195,959	+		Dsui_1142	0.74	-1.2
1,195,959	+		Dsui_1142	0.74	-0.6
1,195,959	+		Dsui_1142	0.74	-0.6
1,195,960	+		Dsui_1142	0.74	-2.7
1,195,962	-		Dsui_1142	0.74	+0.4
1,195,967	-		Dsui_1142	0.75	+0.4
1,195,968	-		Dsui_1142	0.76	+0.4
1,196,006	+		Dsui_1142	0.83	-0.6
1,196,006	+		Dsui_1142	0.83	-0.6
1,196,006	+		Dsui_1142	0.83	+0.4
1,196,006	+		Dsui_1142	0.83	-1.2
1,196,006	+		Dsui_1142	0.83	-0.6
1,196,006	+		Dsui_1142	0.83	-0.6
1,196,014	-		Dsui_1142	0.85	-1.2
1,196,014	-		Dsui_1142	0.85	-1.7
1,196,014	-		Dsui_1142	0.85	-0.2
1,196,014	-		Dsui_1142	0.85	-2.2
1,196,014	-		Dsui_1142	0.85	-1.2
1,196,014	-		Dsui_1142	0.85	-0.6
1,196,014	-		Dsui_1142	0.85	-2.2
1,196,014	-		Dsui_1142	0.85	-0.6
1,196,014	-		Dsui_1142	0.85	+0.4
1,196,014	-		Dsui_1142	0.85	+0.4
1,196,014	-		Dsui_1142	0.85	+0.4
1,196,014	-		Dsui_1142	0.85	-0.6
1,196,014	-		Dsui_1142	0.85	-2.9
1,196,020	+		Dsui_1142	0.86	-1.2
1,196,048	+				-1.6
1,196,048	+				-0.6
1,196,056	-				-2.6
1,196,056	-				+0.4
1,196,056	-				-0.6
1,196,056	-				-1.6
1,196,058	-				-0.1
1,196,066	-				-2.4
1,196,112	+				-1.6
1,196,112	+				+0.4
1,196,120	+				-1.2
1,196,120	-				-1.6
1,196,128	-				-2.6
1,196,141	+				+0.4
1,196,161	+				-1.6
1,196,161	+				+0.4
1,196,166	+				-1.2
1,196,174	-				+0.4
1,196,176	+				-1.9
1,196,176	+				-0.6
1,196,176	+				-2.6
1,196,176	+				+0.4
1,196,176	+				+0.4
1,196,176	+				+0.4
1,196,184	-				-0.3
1,196,184	-				-1.2
1,196,184	-				+0.4
1,196,209	-				-1.6
1,196,216	+				+0.4
1,196,216	+				+0.4
1,196,234	-				-2.6
1,196,234	-				+0.4
1,196,234	-				+0.4
1,196,234	-				+0.4
1,196,286	+		Dsui_1143	0.11	+0.4
1,196,288	-		Dsui_1143	0.11	-3.0
1,196,334	-		Dsui_1143	0.13	-1.7
1,196,348	-		Dsui_1143	0.14	-2.7
1,196,396	+		Dsui_1143	0.16	-1.2
1,196,409	+		Dsui_1143	0.17	-0.6
1,196,440	+		Dsui_1143	0.19	+0.4
1,196,440	+		Dsui_1143	0.19	+0.4
1,196,440	+		Dsui_1143	0.19	+0.4
1,196,448	-		Dsui_1143	0.19	-1.9
1,196,448	-		Dsui_1143	0.19	+0.4
1,196,448	-		Dsui_1143	0.19	+0.4
1,196,448	-		Dsui_1143	0.19	-0.6
1,196,464	-		Dsui_1143	0.20	+0.4
1,196,470	-		Dsui_1143	0.20	-1.2
1,196,518	+		Dsui_1143	0.23	+0.4
1,196,518	-		Dsui_1143	0.23	-0.6
1,196,561	+		Dsui_1143	0.25	-1.2
1,196,622	-		Dsui_1143	0.28	+0.4
1,196,631	-		Dsui_1143	0.29	+0.4
1,196,636	-		Dsui_1143	0.29	-2.2
1,196,650	+		Dsui_1143	0.30	-0.6
1,196,650	+		Dsui_1143	0.30	+0.4
1,196,658	-		Dsui_1143	0.30	-0.6
1,196,675	+		Dsui_1143	0.31	-0.6
1,196,731	+		Dsui_1143	0.34	-1.9
1,196,740	-		Dsui_1143	0.34	+0.4
1,196,748	-		Dsui_1143	0.35	-1.9
1,196,787	+				+0.4
1,196,787	+		Dsui_1143	0.37	-1.6
1,196,806	-		Dsui_1143	0.38	-2.4
1,196,834	+		Dsui_1143	0.39	-0.6
1,196,844	-		Dsui_1143	0.40	-0.6
1,196,913	+		Dsui_1143	0.43	+1.4
1,196,933	+		Dsui_1143	0.44	-0.6
1,196,963	-		Dsui_1143	0.46	-0.6
1,196,963	-		Dsui_1143	0.46	+0.4
1,197,014	-		Dsui_1143	0.49	-2.2
1,197,014	-		Dsui_1143	0.49	+0.4
1,197,014	-		Dsui_1143	0.49	+0.4
1,197,017	+		Dsui_1143	0.49	+0.4
1,197,032	-		Dsui_1143	0.50	+0.4
1,197,038	+		Dsui_1143	0.50	-0.6
1,197,038	+		Dsui_1143	0.50	+1.4
1,197,043	+		Dsui_1143	0.50	-2.2
1,197,048	+		Dsui_1143	0.50	+0.4
1,197,051	-		Dsui_1143	0.51	+0.4
1,197,070	+		Dsui_1143	0.52	-1.2
1,197,102	+		Dsui_1143	0.53	-1.2
1,197,130	-		Dsui_1143	0.55	-1.6
1,197,171	+		Dsui_1143	0.57	+0.4
1,197,171	+				+0.4
1,197,171	+		Dsui_1143	0.57	+0.4
1,197,171	+		Dsui_1143	0.57	+0.1
1,197,171	+		Dsui_1143	0.57	-1.6
1,197,171	+		Dsui_1143	0.57	-0.6
1,197,171	+		Dsui_1143	0.57	+0.4
1,197,174	-		Dsui_1143	0.57	+0.4
1,197,179	-		Dsui_1143	0.57	-0.6
1,197,179	-		Dsui_1143	0.57	-0.6
1,197,179	-		Dsui_1143	0.57	-1.2
1,197,179	-		Dsui_1143	0.57	-0.6
1,197,179	-		Dsui_1143	0.57	-0.6
1,197,179	-		Dsui_1143	0.57	-2.5
1,197,181	+		Dsui_1143	0.57	-0.6
1,197,183	+		Dsui_1143	0.58	-0.6
1,197,183	+		Dsui_1143	0.58	-1.2
1,197,183	+		Dsui_1143	0.58	+0.4
1,197,183	+		Dsui_1143	0.58	+0.4
1,197,183	+		Dsui_1143	0.58	-1.9
1,197,183	+		Dsui_1143	0.58	-0.6
1,197,189	-		Dsui_1143	0.58	+0.4
1,197,191	-		Dsui_1143	0.58	-2.2
1,197,191	-		Dsui_1143	0.58	-0.6
1,197,191	-		Dsui_1143	0.58	-0.6
1,197,194	-		Dsui_1143	0.58	+0.4
1,197,194	-		Dsui_1143	0.58	-1.6
1,197,214	+		Dsui_1143	0.59	+0.4
1,197,214	+		Dsui_1143	0.59	-1.6
1,197,214	+		Dsui_1143	0.59	-1.2
1,197,221	+		Dsui_1143	0.60	+0.4
1,197,222	-		Dsui_1143	0.60	+0.4
1,197,260	+				+0.4
1,197,266	+		Dsui_1143	0.62	+0.4
1,197,270	+		Dsui_1143	0.62	+0.4
1,197,270	+		Dsui_1143	0.62	-2.6
1,197,270	+		Dsui_1143	0.62	-1.2
1,197,278	-		Dsui_1143	0.63	+0.4
1,197,278	-		Dsui_1143	0.63	-1.2
1,197,282	+		Dsui_1143	0.63	+0.4
1,197,358	-		Dsui_1143	0.67	-1.2
1,197,372	-		Dsui_1143	0.67	-1.2
1,197,374	+		Dsui_1143	0.68	-0.6
1,197,382	+		Dsui_1143	0.68	+0.4
1,197,382	-		Dsui_1143	0.68	+0.4
1,197,389	+		Dsui_1143	0.68	+0.4
1,197,401	+		Dsui_1143	0.69	-2.2
1,197,409	-		Dsui_1143	0.69	-1.9
1,197,431	+		Dsui_1143	0.71	-1.6
1,197,439	-		Dsui_1143	0.71	-0.6
1,197,439	-		Dsui_1143	0.71	+0.4
1,197,439	-		Dsui_1143	0.71	-0.6
1,197,439	-		Dsui_1143	0.71	-0.6
1,197,484	-		Dsui_1143	0.73	-0.6
1,197,484	-		Dsui_1143	0.73	+0.4
1,197,512	+		Dsui_1143	0.75	+0.4
1,197,517	+		Dsui_1143	0.75	+0.4
1,197,525	-		Dsui_1143	0.75	-0.6
1,197,578	+		Dsui_1143	0.78	+0.4
1,197,584	-		Dsui_1143	0.79	-0.6
1,197,584	-		Dsui_1143	0.79	+0.4
1,197,641	-		Dsui_1143	0.82	-1.2
1,197,744	+		Dsui_1143	0.87	+0.4
1,197,747	-		Dsui_1143	0.87	-2.6
1,197,782	+		Dsui_1143	0.89	+0.4
1,197,851	-				+0.4
1,197,906	-				+0.4
1,197,937	-				-1.1
1,197,974	+				+0.4
1,197,974	+				-2.6
1,197,974	+				-0.6
1,197,974	+				-1.9
1,197,982	-				-2.4
1,197,982	-				-2.6
1,197,988	+				-1.1
1,198,001	-				+0.4
1,198,077	-				+0.4
1,198,136	+				-0.6
1,198,136	+				-1.6
1,198,147	+				-0.6
1,198,147	+				-0.6
1,198,193	+		Dsui_1144	0.12	+0.4
1,198,200	-		Dsui_1144	0.13	-1.1
1,198,200	-		Dsui_1144	0.13	+0.4
1,198,207	-		Dsui_1144	0.13	+0.4
1,198,222	-		Dsui_1144	0.14	+0.4
1,198,222	-		Dsui_1144	0.14	-1.1
1,198,313	-		Dsui_1144	0.19	+0.4
1,198,315	+		Dsui_1144	0.19	-1.6
1,198,325	+		Dsui_1144	0.20	-0.9
1,198,330	+		Dsui_1144	0.20	-0.6
1,198,333	-		Dsui_1144	0.21	+0.4
1,198,371	-		Dsui_1144	0.23	-0.6
1,198,412	-		Dsui_1144	0.25	+0.4
1,198,416	-		Dsui_1144	0.25	-0.9
1,198,416	-		Dsui_1144	0.25	-1.9
1,198,434	+		Dsui_1144	0.27	-0.6
1,198,505	+		Dsui_1144	0.31	-1.9
1,198,564	+		Dsui_1144	0.34	-0.6
1,198,564	+		Dsui_1144	0.34	-1.6
1,198,571	+		Dsui_1144	0.35	-1.1
1,198,572	-		Dsui_1144	0.35	-1.6
1,198,572	-		Dsui_1144	0.35	-3.5
1,198,579	+		Dsui_1144	0.35	+0.4
1,198,594	-		Dsui_1144	0.36	+0.4
1,198,595	-		Dsui_1144	0.36	-1.9
1,198,600	+		Dsui_1144	0.37	+0.4
1,198,661	-		Dsui_1144	0.40	+0.4
1,198,663	-		Dsui_1144	0.40	+0.4
1,198,755	+		Dsui_1144	0.46	-0.6
1,198,769	+		Dsui_1144	0.47	+0.4
1,198,774	+		Dsui_1144	0.47	+0.4
1,198,774	+		Dsui_1144	0.47	-1.6
1,198,774	+		Dsui_1144	0.47	+0.4
1,198,774	+		Dsui_1144	0.47	-0.6
1,198,774	+		Dsui_1144	0.47	+0.4
1,198,782	-		Dsui_1144	0.47	-0.6
1,198,782	-		Dsui_1144	0.47	+0.4
1,198,782	-		Dsui_1144	0.47	+0.4
1,198,784	-		Dsui_1144	0.48	+1.4
1,198,816	-		Dsui_1144	0.49	-0.6
1,198,856	+		Dsui_1144	0.52	+0.4
1,198,856	+		Dsui_1144	0.52	-0.6
1,198,864	-		Dsui_1144	0.52	-0.6
1,198,905	+		Dsui_1144	0.55	-1.1
1,198,929	-		Dsui_1144	0.56	-0.6
1,198,931	+		Dsui_1144	0.56	+1.4
1,198,939	-		Dsui_1144	0.57	+0.4
1,198,939	-		Dsui_1144	0.57	+0.4
1,198,977	+		Dsui_1144	0.59	-1.6