Strain Fitness in Dechlorosoma suillum PS around Dsui_0789

Experiment: ALP with nitrate 75 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_0787 and Dsui_0788 overlap by 40 nucleotidesDsui_0788 and Dsui_0789 are separated by 256 nucleotidesDsui_0789 and Dsui_0790 are separated by 104 nucleotides Dsui_0787: Dsui_0787 - putative membrane protein, at 794,134 to 794,580 _0787 Dsui_0788: Dsui_0788 - phosphosulfolactate phosphohydrolase-like enzyme, at 794,541 to 795,278 _0788 Dsui_0789: Dsui_0789 - diguanylate cyclase (GGDEF) domain-containing protein, at 795,535 to 796,566 _0789 Dsui_0790: Dsui_0790 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 796,671 to 797,705 _0790 Position (kb) 795 796 797Strain fitness (log2 ratio) -2 -1 0 1at 794.575 kb on + strandat 794.657 kb on + strand, within Dsui_0788at 794.791 kb on + strandat 794.846 kb on + strand, within Dsui_0788at 794.864 kb on - strand, within Dsui_0788at 794.864 kb on - strand, within Dsui_0788at 794.909 kb on - strand, within Dsui_0788at 794.919 kb on + strand, within Dsui_0788at 795.040 kb on - strand, within Dsui_0788at 795.112 kb on - strand, within Dsui_0788at 795.232 kb on + strandat 795.232 kb on + strandat 795.541 kb on - strandat 795.591 kb on - strandat 795.660 kb on + strand, within Dsui_0789at 795.668 kb on - strand, within Dsui_0789at 795.697 kb on + strand, within Dsui_0789at 795.705 kb on - strand, within Dsui_0789at 795.711 kb on - strand, within Dsui_0789at 795.758 kb on - strand, within Dsui_0789at 795.764 kb on + strand, within Dsui_0789at 795.857 kb on - strand, within Dsui_0789at 795.883 kb on - strand, within Dsui_0789at 795.887 kb on + strand, within Dsui_0789at 795.923 kb on - strand, within Dsui_0789at 796.006 kb on - strand, within Dsui_0789at 796.017 kb on + strand, within Dsui_0789at 796.133 kb on - strand, within Dsui_0789at 796.136 kb on + strand, within Dsui_0789at 796.139 kb on - strand, within Dsui_0789at 796.205 kb on + strand, within Dsui_0789at 796.213 kb on - strand, within Dsui_0789at 796.254 kb on + strand, within Dsui_0789at 796.254 kb on + strand, within Dsui_0789at 796.254 kb on + strand, within Dsui_0789at 796.254 kb on + strand, within Dsui_0789at 796.308 kb on + strand, within Dsui_0789at 796.308 kb on + strand, within Dsui_0789at 796.406 kb on + strand, within Dsui_0789at 796.412 kb on + strandat 796.472 kb on - strandat 796.479 kb on + strandat 796.493 kb on + strandat 796.520 kb on - strandat 796.536 kb on - strandat 796.547 kb on - strandat 796.573 kb on + strandat 796.590 kb on - strandat 796.637 kb on + strandat 796.656 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with nitrate 75 mM
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794,575 + -0.5
794,657 + Dsui_0788 0.16 +0.9
794,791 + +0.5
794,846 + Dsui_0788 0.41 -0.4
794,864 - Dsui_0788 0.44 -0.2
794,864 - Dsui_0788 0.44 +0.1
794,909 - Dsui_0788 0.50 -0.4
794,919 + Dsui_0788 0.51 +0.5
795,040 - Dsui_0788 0.68 +0.4
795,112 - Dsui_0788 0.77 +0.1
795,232 + -1.8
795,232 + -1.4
795,541 - -1.8
795,591 - +1.5
795,660 + Dsui_0789 0.12 -2.1
795,668 - Dsui_0789 0.13 +0.1
795,697 + Dsui_0789 0.16 -0.5
795,705 - Dsui_0789 0.16 -0.6
795,711 - Dsui_0789 0.17 -1.2
795,758 - Dsui_0789 0.22 -0.7
795,764 + Dsui_0789 0.22 -1.8
795,857 - Dsui_0789 0.31 -0.5
795,883 - Dsui_0789 0.34 -1.5
795,887 + Dsui_0789 0.34 -1.1
795,923 - Dsui_0789 0.38 +0.1
796,006 - Dsui_0789 0.46 -1.7
796,017 + Dsui_0789 0.47 -0.5
796,133 - Dsui_0789 0.58 -0.7
796,136 + Dsui_0789 0.58 -1.1
796,139 - Dsui_0789 0.59 -0.1
796,205 + Dsui_0789 0.65 -2.7
796,213 - Dsui_0789 0.66 -0.2
796,254 + Dsui_0789 0.70 -0.5
796,254 + Dsui_0789 0.70 -1.1
796,254 + Dsui_0789 0.70 -0.5
796,254 + Dsui_0789 0.70 +0.5
796,308 + Dsui_0789 0.75 -1.5
796,308 + Dsui_0789 0.75 -0.5
796,406 + Dsui_0789 0.84 -0.5
796,412 + +0.5
796,472 - -0.2
796,479 + +0.5
796,493 + +0.5
796,520 - -0.6
796,536 - -1.3
796,547 - -0.7
796,573 + -1.5
796,590 - -2.6
796,637 + -1.3
796,656 + -0.4

Or see this region's nucleotide sequence