Experiment: Adenosine (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BWI76_RS09810 and BWI76_RS09815 overlap by 4 nucleotides BWI76_RS09815 and BWI76_RS09820 are separated by 141 nucleotides BWI76_RS09820 and BWI76_RS09825 overlap by 24 nucleotides BWI76_RS09825 and BWI76_RS09830 are separated by 121 nucleotides
BWI76_RS09810: BWI76_RS09810 - hypothetical protein, at 2,059,189 to 2,059,371
_RS09810
BWI76_RS09815: BWI76_RS09815 - 3-deoxy-manno-octulosonate cytidylyltransferase, at 2,059,368 to 2,060,114
_RS09815
BWI76_RS09820: BWI76_RS09820 - hypothetical protein, at 2,060,256 to 2,061,149
_RS09820
BWI76_RS09825: BWI76_RS09825 - envelope biogenesis factor ElyC, at 2,061,126 to 2,061,905
_RS09825
BWI76_RS09830: BWI76_RS09830 - tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM, at 2,062,027 to 2,062,806
_RS09830
Position (kb)
2060
2061
2062 Strain fitness (log2 ratio)
-1
0
1
2 at 2060.371 kb on + strand, within BWI76_RS09820 at 2060.689 kb on - strand, within BWI76_RS09820 at 2060.851 kb on + strand, within BWI76_RS09820 at 2060.870 kb on + strand, within BWI76_RS09820 at 2060.915 kb on + strand, within BWI76_RS09820 at 2061.255 kb on - strand, within BWI76_RS09825 at 2061.333 kb on + strand, within BWI76_RS09825 at 2061.806 kb on + strand, within BWI76_RS09825 at 2061.811 kb on + strand, within BWI76_RS09825 at 2061.814 kb on - strand, within BWI76_RS09825 at 2061.990 kb on - strand at 2062.032 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Adenosine (C) remove 2,060,371 + BWI76_RS09820 0.13 +1.8 2,060,689 - BWI76_RS09820 0.48 +0.8 2,060,851 + BWI76_RS09820 0.67 +1.3 2,060,870 + BWI76_RS09820 0.69 -0.0 2,060,915 + BWI76_RS09820 0.74 -0.3 2,061,255 - BWI76_RS09825 0.17 +0.5 2,061,333 + BWI76_RS09825 0.27 -0.2 2,061,806 + BWI76_RS09825 0.87 +0.2 2,061,811 + BWI76_RS09825 0.88 -0.1 2,061,814 - BWI76_RS09825 0.88 -0.2 2,061,990 - +1.5 2,062,032 - -0.5
Or see this region's nucleotide sequence