Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29520

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
6,551,351	+		PFLU_RS29510	0.81	+2.6
6,551,352	-		PFLU_RS29510	0.81	+3.6
6,551,750	+				-0.7
6,551,751	-				-0.7
6,551,751	-				+1.1
6,551,771	+				-1.9
6,551,771	+				-1.8
6,551,771	+				+0.6
6,551,771	+				+1.8
6,551,771	+				+1.6
6,551,771	+				-0.8
6,551,771	+				-1.6
6,551,771	+				-1.4
6,551,771	+				-0.5
6,551,771	+				+1.2
6,551,771	+				-0.0
6,551,772	-				-1.2
6,551,772	-				-0.5
6,551,772	-				-0.7
6,551,772	-				-0.2
6,551,772	-				+2.3
6,551,772	-				+1.1
6,551,772	-				+1.6
6,551,772	-				-0.5
6,551,772	-				+0.6
6,551,774	+				+1.7
6,551,774	+				-1.4
6,551,774	+				+0.4
6,551,774	+				-0.4
6,551,774	+				-1.0
6,551,774	+				+1.8
6,551,774	+				+1.1
6,551,774	+				+0.3
6,551,774	+				+0.6
6,551,774	+				-0.2
6,551,774	+				-2.5
6,551,774	+				+0.1
6,551,774	+				+3.7
6,551,775	-				+1.9
6,551,775	-				-1.4
6,551,775	-				+0.5
6,551,775	-				-0.9
6,551,775	-				+0.6
6,551,775	-				-2.3
6,551,775	-				+0.6
6,551,775	-				-2.5
6,551,775	-				-1.2
6,551,775	-				-0.2
6,551,775	-				-0.5
6,551,803	+				-0.4
6,551,803	+				+0.3
6,551,803	+				+0.2
6,551,804	-				-1.2
6,551,804	-				-1.2
6,551,804	-				-2.2
6,551,804	-				-0.6
6,551,804	-				-1.9
6,551,804	-				-0.4
6,551,840	+		PFLU_RS29515	0.13	+0.4
6,551,840	+		PFLU_RS29515	0.13	-1.7
6,551,840	+		PFLU_RS29515	0.13	-0.5
6,551,840	+		PFLU_RS29515	0.13	-2.2
6,551,840	+		PFLU_RS29515	0.13	+1.8
6,551,840	+		PFLU_RS29515	0.13	+2.2
6,551,840	+		PFLU_RS29515	0.13	-0.7
6,551,840	+		PFLU_RS29515	0.13	-1.6
6,551,840	+		PFLU_RS29515	0.13	+0.4
6,551,840	+		PFLU_RS29515	0.13	+1.0
6,551,840	+		PFLU_RS29515	0.13	+0.3
6,551,841	-		PFLU_RS29515	0.14	-1.2
6,551,841	-		PFLU_RS29515	0.14	-0.5
6,551,841	-		PFLU_RS29515	0.14	-1.8
6,551,841	-		PFLU_RS29515	0.14	-2.8
6,551,841	-		PFLU_RS29515	0.14	+1.4
6,551,873	+		PFLU_RS29515	0.22	-0.8
6,551,873	+		PFLU_RS29515	0.22	-2.0
6,551,873	+		PFLU_RS29515	0.22	-1.6
6,551,873	+		PFLU_RS29515	0.22	-1.2
6,551,873	+		PFLU_RS29515	0.22	+2.1
6,551,873	+		PFLU_RS29515	0.22	-0.8
6,551,873	+		PFLU_RS29515	0.22	-1.6
6,551,873	+		PFLU_RS29515	0.22	-0.4
6,551,873	+		PFLU_RS29515	0.22	-0.6
6,551,873	+		PFLU_RS29515	0.22	-1.2
6,551,873	+		PFLU_RS29515	0.22	+2.5
6,551,873	+		PFLU_RS29515	0.22	-2.5
6,551,873	+		PFLU_RS29515	0.22	-1.1
6,551,873	+		PFLU_RS29515	0.22	+0.7
6,551,873	+		PFLU_RS29515	0.22	+0.5
6,551,873	+		PFLU_RS29515	0.22	+0.0
6,551,873	+		PFLU_RS29515	0.22	+2.0
6,551,873	+		PFLU_RS29515	0.22	-1.4
6,551,873	+		PFLU_RS29515	0.22	-0.2
6,551,874	-		PFLU_RS29515	0.22	-2.3
6,551,874	-		PFLU_RS29515	0.22	+0.2
6,551,874	-		PFLU_RS29515	0.22	-0.1
6,551,874	-		PFLU_RS29515	0.22	-1.0
6,551,874	-		PFLU_RS29515	0.22	-1.1
6,551,874	-		PFLU_RS29515	0.22	-2.0
6,551,874	-		PFLU_RS29515	0.22	+0.5
6,551,874	-		PFLU_RS29515	0.22	-0.1
6,551,874	-		PFLU_RS29515	0.22	-0.1
6,551,874	-		PFLU_RS29515	0.22	-0.6
6,551,874	-		PFLU_RS29515	0.22	-0.2
6,551,874	-		PFLU_RS29515	0.22	+0.6
6,551,874	-		PFLU_RS29515	0.22	-1.5
6,551,874	-		PFLU_RS29515	0.22	-2.6
6,551,874	-		PFLU_RS29515	0.22	-0.1
6,551,874	-		PFLU_RS29515	0.22	+0.8
6,551,874	-		PFLU_RS29515	0.22	+0.6
6,551,874	-		PFLU_RS29515	0.22	-1.4
6,551,874	-		PFLU_RS29515	0.22	-0.9
6,551,943	+		PFLU_RS29515	0.40	-1.6
6,551,943	+		PFLU_RS29515	0.40	-0.7
6,551,943	+		PFLU_RS29515	0.40	+4.1
6,551,943	+		PFLU_RS29515	0.40	+0.2
6,551,943	+		PFLU_RS29515	0.40	-1.7
6,551,944	-		PFLU_RS29515	0.41	+0.1
6,551,944	-		PFLU_RS29515	0.41	-1.8
6,551,944	-		PFLU_RS29515	0.41	-1.9
6,551,944	-		PFLU_RS29515	0.41	+0.1
6,552,071	+		PFLU_RS29515	0.74	-0.1
6,552,071	+		PFLU_RS29515	0.74	+0.2
6,552,071	+		PFLU_RS29515	0.74	-0.4
6,552,071	+		PFLU_RS29515	0.74	-1.5
6,552,071	+		PFLU_RS29515	0.74	-1.6
6,552,072	-		PFLU_RS29515	0.74	+0.8
6,552,072	-		PFLU_RS29515	0.74	-1.7
6,552,167	+				+0.1
6,552,167	+				-1.7
6,552,242	+				+1.0
6,552,242	+				-0.5
6,552,242	+				-0.5
6,552,242	+				-2.2
6,552,243	-				+0.8
6,552,243	-				-0.8
6,552,243	-				-0.1
6,552,243	-				+0.0
6,552,243	-				+0.6
6,552,243	-				-1.0
6,552,243	-				+0.3
6,552,243	-				+0.6
6,552,243	-				-0.8
6,552,243	-				+1.3
6,552,243	-				-1.7
6,552,243	-				-0.0
6,552,271	-				+0.4
6,552,433	+		PFLU_RS29520	0.28	-1.4
6,552,433	+		PFLU_RS29520	0.28	-2.2
6,552,434	-		PFLU_RS29520	0.28	+1.0
6,552,434	-		PFLU_RS29520	0.28	+1.5
6,552,436	+		PFLU_RS29520	0.28	-0.2
6,552,436	+		PFLU_RS29520	0.28	-1.6
6,552,436	+		PFLU_RS29520	0.28	-1.9
6,552,436	+		PFLU_RS29520	0.28	-0.5
6,552,436	+		PFLU_RS29520	0.28	-1.9
6,552,436	+		PFLU_RS29520	0.28	-0.4
6,552,436	+		PFLU_RS29520	0.28	+2.2
6,552,436	+		PFLU_RS29520	0.28	+1.5
6,552,436	+		PFLU_RS29520	0.28	-1.6
6,552,436	+		PFLU_RS29520	0.28	+0.2
6,552,436	+		PFLU_RS29520	0.28	-0.4
6,552,436	+		PFLU_RS29520	0.28	+0.3
6,552,436	+		PFLU_RS29520	0.28	+0.6
6,552,436	+		PFLU_RS29520	0.28	+1.6
6,552,436	+		PFLU_RS29520	0.28	-0.4
6,552,437	-		PFLU_RS29520	0.28	-3.2
6,552,437	-		PFLU_RS29520	0.28	-0.1
6,552,437	-		PFLU_RS29520	0.28	-1.9
6,552,437	-		PFLU_RS29520	0.28	-1.6
6,552,437	-		PFLU_RS29520	0.28	-0.2
6,552,437	-		PFLU_RS29520	0.28	-0.4
6,552,437	-		PFLU_RS29520	0.28	+2.1
6,552,437	-		PFLU_RS29520	0.28	+1.6
6,552,437	-		PFLU_RS29520	0.28	-2.5
6,552,505	+		PFLU_RS29520	0.38	+1.5
6,552,505	+		PFLU_RS29520	0.38	-0.3
6,552,505	+		PFLU_RS29520	0.38	-0.8
6,552,505	+		PFLU_RS29520	0.38	+0.4
6,552,506	-		PFLU_RS29520	0.38	+0.8
6,552,652	+		PFLU_RS29520	0.57	-0.7
6,552,652	+		PFLU_RS29520	0.57	-0.9
6,552,652	+		PFLU_RS29520	0.57	-0.5
6,552,652	+		PFLU_RS29520	0.57	+0.0
6,552,653	-		PFLU_RS29520	0.57	+2.8
6,552,653	-		PFLU_RS29520	0.57	-2.6
6,552,653	-		PFLU_RS29520	0.57	+1.3
6,552,661	+		PFLU_RS29520	0.58	+0.0
6,552,661	+		PFLU_RS29520	0.58	-2.5
6,552,662	-		PFLU_RS29520	0.59	+1.6
6,552,750	+		PFLU_RS29520	0.70	-0.3
6,552,750	+		PFLU_RS29520	0.70	-0.4
6,552,750	+		PFLU_RS29520	0.70	-0.7
6,552,751	-		PFLU_RS29520	0.71	-0.5
6,552,751	-		PFLU_RS29520	0.71	-0.5
6,552,751	-		PFLU_RS29520	0.71	+1.1
6,552,763	+		PFLU_RS29520	0.72	-1.1
6,552,808	+		PFLU_RS29520	0.78	+0.1
6,552,809	-		PFLU_RS29520	0.78	+0.4
6,552,921	-				+0.3
6,552,921	-				+1.5
6,552,921	-				-2.0
6,552,921	-				+1.3
6,552,959	+				+0.6
6,552,959	+				-0.4
6,552,959	+				+1.4
6,552,960	-				-1.0
6,552,960	-				+0.1
6,552,960	-				-0.2
6,552,967	+				+0.4
6,553,020	+				+1.4
6,553,020	+				+1.5
6,553,020	+				-1.2
6,553,020	+				-1.1
6,553,020	+				-0.4
6,553,020	+				-0.9
6,553,020	+				-0.8
6,553,020	+				+2.1
6,553,029	+				-1.5
6,553,029	+				-1.5
6,553,029	+				+1.1
6,553,029	+				-1.7
6,553,029	+				-0.7
6,553,029	+				-1.6
6,553,030	-				+1.0
6,553,030	-				+0.3
6,553,030	-				+0.2
6,553,030	-				+0.7
6,553,030	-				+1.5
6,553,030	-				+1.5
6,553,030	-				-1.9
6,553,030	-				+2.2
6,553,032	+				-2.6
6,553,032	+				-0.5
6,553,032	+				-0.4
6,553,032	+				+0.6
6,553,032	+				+2.2
6,553,032	+				+1.5
6,553,032	+				+2.4
6,553,032	+				-2.1
6,553,032	+				+0.6
6,553,032	+				-0.0
6,553,032	+				-1.9
6,553,032	+				-3.0
6,553,033	-				+0.1
6,553,033	-				-0.3
6,553,033	-				+0.3
6,553,033	-				+0.5
6,553,033	-				+3.0
6,553,033	-				-1.9
6,553,033	-				-1.1
6,553,033	-				-1.7
6,553,033	-				-0.9
6,553,033	-				-0.7
6,553,033	-				-1.2
6,553,033	-				+0.4
6,553,033	-				-0.4
6,553,033	-				-0.9
6,553,033	-				+2.1
6,553,033	-				+0.6
6,553,117	+				+1.0
6,553,118	-				+0.4
6,553,118	-				+0.3
6,553,118	-				-0.5
6,553,118	-				-0.6
6,553,118	-				+4.5
6,553,118	-				-1.5
6,553,118	-				+3.6
6,553,118	-				+0.4
6,553,118	-				+0.9
6,553,118	-				+1.4
6,553,118	-				+1.5
6,553,129	+				+0.4
6,553,129	+				-1.4
6,553,129	+				+0.3
6,553,130	-				+0.1
6,553,130	-				-1.3
6,553,130	-				+1.6
6,553,139	-				+1.3
6,553,139	-				-1.6
6,553,300	+		PFLU_RS29525	0.24	+0.9
6,553,300	+		PFLU_RS29525	0.24	+1.7
6,553,300	+		PFLU_RS29525	0.24	+1.9
6,553,300	+		PFLU_RS29525	0.24	-1.4
6,553,300	+		PFLU_RS29525	0.24	-0.1
6,553,301	-		PFLU_RS29525	0.24	+0.6
6,553,301	-		PFLU_RS29525	0.24	-2.5
6,553,301	-		PFLU_RS29525	0.24	-0.0
6,553,390	+		PFLU_RS29525	0.35	-1.1
6,553,390	+		PFLU_RS29525	0.35	+0.9
6,553,390	+		PFLU_RS29525	0.35	-2.7
6,553,390	+		PFLU_RS29525	0.35	-0.5
6,553,390	+		PFLU_RS29525	0.35	+0.8
6,553,391	-		PFLU_RS29525	0.35	+0.7
6,553,391	-		PFLU_RS29525	0.35	-0.5
6,553,391	-		PFLU_RS29525	0.35	-2.7
6,553,391	-		PFLU_RS29525	0.35	-1.0
6,553,391	-		PFLU_RS29525	0.35	+2.1
6,553,391	-		PFLU_RS29525	0.35	-0.4
6,553,391	-		PFLU_RS29525	0.35	-0.4
6,553,391	-		PFLU_RS29525	0.35	-1.5
6,553,392	+		PFLU_RS29525	0.35	+0.5
6,553,392	+		PFLU_RS29525	0.35	-1.7
6,553,392	+		PFLU_RS29525	0.35	-1.1
6,553,392	+		PFLU_RS29525	0.35	+1.0
6,553,392	+		PFLU_RS29525	0.35	+0.1
6,553,392	+		PFLU_RS29525	0.35	+0.1
6,553,392	+		PFLU_RS29525	0.35	+0.3
6,553,392	+		PFLU_RS29525	0.35	-0.6
6,553,392	+		PFLU_RS29525	0.35	+0.4
6,553,392	+		PFLU_RS29525	0.35	+1.6
6,553,392	+		PFLU_RS29525	0.35	+2.2
6,553,392	+		PFLU_RS29525	0.35	+1.3
6,553,392	+		PFLU_RS29525	0.35	+1.5
6,553,392	+		PFLU_RS29525	0.35	-0.4
6,553,392	+		PFLU_RS29525	0.35	+1.3
6,553,392	+		PFLU_RS29525	0.35	+1.5
6,553,392	+		PFLU_RS29525	0.35	+0.1
6,553,392	+		PFLU_RS29525	0.35	-1.7
6,553,392	+		PFLU_RS29525	0.35	-0.8
6,553,392	+		PFLU_RS29525	0.35	+0.4
6,553,392	+		PFLU_RS29525	0.35	-0.9
6,553,392	+		PFLU_RS29525	0.35	-0.5
6,553,392	+		PFLU_RS29525	0.35	+0.8
6,553,392	+		PFLU_RS29525	0.35	+1.1
6,553,392	+		PFLU_RS29525	0.35	-0.5
6,553,392	+		PFLU_RS29525	0.35	+0.6
6,553,392	+		PFLU_RS29525	0.35	+0.2
6,553,392	+		PFLU_RS29525	0.35	+2.8
6,553,392	+		PFLU_RS29525	0.35	+0.9
6,553,392	+		PFLU_RS29525	0.35	+0.6
6,553,392	+		PFLU_RS29525	0.35	+1.5
6,553,393	-		PFLU_RS29525	0.35	+1.1
6,553,393	-		PFLU_RS29525	0.35	-0.2
6,553,393	-		PFLU_RS29525	0.35	-2.2
6,553,393	-		PFLU_RS29525	0.35	-1.4
6,553,393	-		PFLU_RS29525	0.35	+0.6
6,553,393	-		PFLU_RS29525	0.35	+3.1
6,553,393	-		PFLU_RS29525	0.35	+1.4
6,553,393	-		PFLU_RS29525	0.35	+1.1
6,553,393	-		PFLU_RS29525	0.35	-1.2
6,553,393	-		PFLU_RS29525	0.35	-0.2
6,553,393	-		PFLU_RS29525	0.35	+3.0
6,553,393	-		PFLU_RS29525	0.35	+0.1
6,553,393	-		PFLU_RS29525	0.35	+0.5
6,553,393	-		PFLU_RS29525	0.35	+0.1
6,553,393	-		PFLU_RS29525	0.35	+1.1
6,553,393	-		PFLU_RS29525	0.35	+0.1
6,553,393	-		PFLU_RS29525	0.35	-1.4
6,553,393	-		PFLU_RS29525	0.35	+0.3
6,553,393	-		PFLU_RS29525	0.35	+0.8
6,553,393	-		PFLU_RS29525	0.35	-0.8
6,553,393	-		PFLU_RS29525	0.35	-0.2
6,553,393	-		PFLU_RS29525	0.35	-1.3
6,553,393	-		PFLU_RS29525	0.35	-1.8
6,553,393	-		PFLU_RS29525	0.35	-2.1
6,553,393	-		PFLU_RS29525	0.35	+2.4
6,553,393	-		PFLU_RS29525	0.35	-0.2
6,553,393	-		PFLU_RS29525	0.35	+0.3
6,553,393	-		PFLU_RS29525	0.35	-0.1
6,553,393	-		PFLU_RS29525	0.35	+0.5
6,553,393	-		PFLU_RS29525	0.35	+0.3
6,553,393	-		PFLU_RS29525	0.35	-0.7
6,553,393	-		PFLU_RS29525	0.35	-1.8
6,553,393	-		PFLU_RS29525	0.35	-0.4
6,553,410	+		PFLU_RS29525	0.37	-1.5
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6,553,959	+				+1.8
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