Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS26725

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
5,968,431	+				-2.3
5,968,431	+				+0.4
5,968,431	+				-2.4
5,968,431	+				-0.5
5,968,431	+				-0.8
5,968,431	+				-0.8
5,968,431	+				-0.8
5,968,431	+				-1.8
5,968,431	+				-1.0
5,968,431	+				+0.2
5,968,431	+				-1.7
5,968,431	+				-3.1
5,968,431	+				-2.2
5,968,431	+				-1.0
5,968,432	-				+2.0
5,968,432	-				-0.4
5,968,432	-				+0.4
5,968,434	+				+2.4
5,968,435	-				-2.3
5,968,435	-				-1.4
5,968,480	+				-2.3
5,968,480	+				+0.2
5,968,480	+				-0.6
5,968,480	+				-1.4
5,968,480	+				-2.2
5,968,481	-				+1.6
5,968,481	-				+0.2
5,968,481	-				-0.2
5,968,481	-				-2.8
5,968,502	+				-1.7
5,968,502	+				-0.0
5,968,502	+				+0.9
5,968,502	+				-1.5
5,968,502	+				-0.4
5,968,502	+				-0.5
5,968,503	-				+0.8
5,968,503	-				-2.6
5,968,503	-				-0.4
5,968,503	-				-0.9
5,968,503	-				-0.9
5,968,503	-				-0.1
5,968,503	-				-1.6
5,968,516	+				-2.5
5,968,516	+				-0.3
5,968,516	+				-2.4
5,968,516	+				-0.8
5,968,517	-				+0.1
5,968,517	-				-1.2
5,968,517	-				+1.7
5,968,517	-				-1.8
5,968,517	-				-1.4
5,968,517	-				-0.8
5,968,517	-				-1.3
5,968,537	+				+2.9
5,968,537	+				+0.4
5,968,537	+				+1.6
5,968,537	+				-0.8
5,968,537	+				+0.5
5,968,537	+				+0.8
5,968,537	+				+0.0
5,968,537	+				+1.3
5,968,537	+				+1.4
5,968,537	+				+2.1
5,968,537	+				+2.2
5,968,537	+				+1.7
5,968,537	+				-2.3
5,968,537	+				-0.8
5,968,537	+				+1.4
5,968,537	+				-1.2
5,968,537	-				-1.2
5,968,538	-				+0.2
5,968,538	-				-1.0
5,968,538	-				+1.5
5,968,538	-				+0.1
5,968,538	-				+2.1
5,968,538	-				+2.4
5,968,538	-				+2.4
5,968,538	-				+0.0
5,968,538	-				+1.1
5,968,538	-				+0.1
5,968,538	-				-1.2
5,968,538	-				+1.9
5,968,538	-				+0.1
5,968,538	-				+0.5
5,968,538	-				+0.4
5,968,538	-				+1.5
5,968,554	+				+1.1
5,968,554	+				+1.1
5,968,554	+				-1.3
5,968,554	+				-2.5
5,968,554	+				-0.3
5,968,554	+				-1.5
5,968,554	+				+0.9
5,968,554	+				+1.7
5,968,554	+				-0.3
5,968,555	-				-0.7
5,968,555	-				+1.3
5,968,555	-				+1.2
5,968,555	-				-0.7
5,968,555	-				+0.8
5,968,555	-				+0.9
5,968,555	-				-0.4
5,968,555	-				+2.1
5,968,650	+		PFLU_RS26720	0.18	-0.4
5,968,650	+		PFLU_RS26720	0.18	+0.3
5,968,651	-		PFLU_RS26720	0.18	+3.4
5,968,651	-		PFLU_RS26720	0.18	-1.0
5,968,906	+		PFLU_RS26720	0.58	-1.4
5,968,906	+		PFLU_RS26720	0.58	+1.7
5,968,906	+		PFLU_RS26720	0.58	-0.2
5,968,906	+		PFLU_RS26720	0.58	-0.4
5,968,906	+		PFLU_RS26720	0.58	-0.8
5,968,906	+		PFLU_RS26720	0.58	-0.3
5,968,906	+		PFLU_RS26720	0.58	+2.1
5,968,906	+		PFLU_RS26720	0.58	+1.5
5,968,906	+		PFLU_RS26720	0.58	+1.1
5,968,906	+		PFLU_RS26720	0.58	-1.0
5,968,906	+		PFLU_RS26720	0.58	-1.3
5,968,906	+		PFLU_RS26720	0.58	-0.9
5,968,907	-		PFLU_RS26720	0.58	+0.9
5,968,907	-		PFLU_RS26720	0.58	-0.0
5,968,907	-		PFLU_RS26720	0.58	+0.4
5,968,907	-		PFLU_RS26720	0.58	-1.5
5,968,907	-		PFLU_RS26720	0.58	-0.8
5,968,907	-		PFLU_RS26720	0.58	-0.2
5,968,907	-		PFLU_RS26720	0.58	-1.0
5,968,907	-		PFLU_RS26720	0.58	-1.2
5,968,907	-		PFLU_RS26720	0.58	-1.2
5,968,907	-		PFLU_RS26720	0.58	-2.2
5,968,907	-		PFLU_RS26720	0.58	+1.4
5,968,907	-		PFLU_RS26720	0.58	+2.1
5,968,907	-		PFLU_RS26720	0.58	-1.4
5,969,062	+		PFLU_RS26720	0.82	-1.2
5,969,062	+		PFLU_RS26720	0.82	+0.8
5,969,062	+		PFLU_RS26720	0.82	+0.5
5,969,063	-		PFLU_RS26720	0.82	-2.0
5,969,063	-		PFLU_RS26720	0.82	+1.4
5,969,063	-		PFLU_RS26720	0.82	+1.2
5,969,063	-		PFLU_RS26720	0.82	+2.1
5,969,063	-		PFLU_RS26720	0.82	-0.3
5,969,063	-		PFLU_RS26720	0.82	-1.2
5,969,063	-		PFLU_RS26720	0.82	-2.8
5,969,165	+				-1.8
5,969,165	+				+3.9
5,969,165	+				+1.0
5,969,165	+				-1.8
5,969,165	+				-0.2
5,969,165	+				-0.1
5,969,165	+				-0.2
5,969,165	+				-0.3
5,969,165	+				+0.4
5,969,165	+				+0.1
5,969,165	+				+1.2
5,969,165	+				+1.0
5,969,165	+				+1.0
5,969,165	+				+0.1
5,969,166	-				+0.5
5,969,166	-				-1.4
5,969,166	-				+0.8
5,969,166	-				+1.9
5,969,166	-				+0.8
5,969,166	-				+1.8
5,969,166	-				+0.8
5,969,169	+				+1.6
5,969,169	+				-0.5
5,969,169	+				-0.3
5,969,169	+				+2.1
5,969,169	+				-1.0
5,969,169	+				+0.6
5,969,169	+				-2.0
5,969,169	+				+0.8
5,969,169	+				-1.3
5,969,169	+				-1.4
5,969,169	+				+0.4
5,969,169	+				+1.4
5,969,169	+				-0.2
5,969,170	-				+0.8
5,969,170	-				+0.5
5,969,170	-				-0.8
5,969,170	-				+0.5
5,969,170	-				+0.8
5,969,170	-				-1.6
5,969,170	-				+0.1
5,969,170	-				-0.6
5,969,170	-				+0.7
5,969,170	-				+0.7
5,969,170	-				+0.6
5,969,170	-				+0.6
5,969,170	-				+2.7
5,969,170	-				-0.9
5,969,170	-				+0.4
5,969,170	-				+3.1
5,969,170	-				-2.0
5,969,173	+				-1.6
5,969,173	+				+0.5
5,969,173	+				-0.1
5,969,173	+				-2.5
5,969,173	+				-0.0
5,969,173	+				-0.5
5,969,173	+				-1.0
5,969,173	+				-1.5
5,969,173	+				-1.0
5,969,173	+				-0.2
5,969,173	+				+0.4
5,969,173	+				+0.9
5,969,173	+				-0.9
5,969,173	+				+0.4
5,969,173	+				-0.9
5,969,173	+				+0.1
5,969,174	-				-1.0
5,969,174	-				+4.2
5,969,174	-				+0.4
5,969,174	-				+0.8
5,969,174	-				-1.0
5,969,174	-				-1.3
5,969,174	-				+0.6
5,969,174	-				-0.2
5,969,174	-				-0.6
5,969,174	-				-1.5
5,969,174	-				+1.4
5,969,174	-				-1.9
5,969,174	-				-1.2
5,969,174	-				+0.4
5,969,174	-				-1.4
5,969,174	-				+1.7
5,969,224	-				+1.5
5,969,224	-				+0.5
5,969,284	+				-0.1
5,969,284	+				+0.7
5,969,284	+				+0.9
5,969,284	+				-1.0
5,969,285	-				-1.3
5,969,304	-				+3.5
5,969,304	-				-0.8
5,969,304	-				-1.5
5,969,304	-				+1.4
5,969,304	-				-2.4
5,969,304	-				-0.8
5,969,304	-				+2.4
5,969,351	+				+1.1
5,969,351	+				-1.0
5,969,351	+				-0.0
5,969,366	+				+0.8
5,969,366	+				+0.1
5,969,366	+				+1.4
5,969,367	-				+0.2
5,969,367	-				-0.1
5,969,368	+				-0.5
5,969,368	+				-0.6
5,969,368	+				+1.5
5,969,368	+				+0.0
5,969,368	+				+0.8
5,969,368	+				-1.3
5,969,369	-				+1.3
5,969,369	-				-0.0
5,969,433	+		PFLU_RS26725	0.24	-2.3
5,969,434	-		PFLU_RS26725	0.24	+0.4
5,969,472	-		PFLU_RS26725	0.38	-1.5
5,969,528	+		PFLU_RS26725	0.57	+1.4
5,969,528	+		PFLU_RS26725	0.57	-0.0
5,969,528	+		PFLU_RS26725	0.57	+0.8
5,969,528	+		PFLU_RS26725	0.57	-2.1
5,969,528	+		PFLU_RS26725	0.57	-1.2
5,969,528	+		PFLU_RS26725	0.57	-1.4
5,969,528	+		PFLU_RS26725	0.57	-1.9
5,969,528	+		PFLU_RS26725	0.57	-0.6
5,969,528	+		PFLU_RS26725	0.57	-0.2
5,969,528	+		PFLU_RS26725	0.57	+2.0
5,969,528	+		PFLU_RS26725	0.57	-0.0
5,969,529	-		PFLU_RS26725	0.58	-1.0
5,969,529	-		PFLU_RS26725	0.58	+0.1
5,969,529	-		PFLU_RS26725	0.58	-0.7
5,969,529	-		PFLU_RS26725	0.58	-1.7
5,969,529	-		PFLU_RS26725	0.58	+1.5
5,969,529	-		PFLU_RS26725	0.58	+1.1
5,969,529	-		PFLU_RS26725	0.58	+0.4
5,969,529	-		PFLU_RS26725	0.58	-1.0
5,969,529	-		PFLU_RS26725	0.58	-0.2
5,969,529	-		PFLU_RS26725	0.58	-0.0
5,969,552	+		PFLU_RS26725	0.66	-0.6
5,969,552	+		PFLU_RS26725	0.66	+0.6
5,969,552	+		PFLU_RS26725	0.66	+1.3
5,969,552	+		PFLU_RS26725	0.66	-0.1
5,969,552	+		PFLU_RS26725	0.66	+0.6
5,969,552	+		PFLU_RS26725	0.66	+1.0
5,969,552	+		PFLU_RS26725	0.66	+0.2
5,969,552	+		PFLU_RS26725	0.66	-2.2
5,969,552	+		PFLU_RS26725	0.66	-1.4
5,969,553	-		PFLU_RS26725	0.66	-0.2
5,969,553	-		PFLU_RS26725	0.66	-1.8
5,969,553	-		PFLU_RS26725	0.66	+2.4
5,969,553	-		PFLU_RS26725	0.66	+1.4
5,969,643	+				+0.3
5,969,644	-				+2.4
5,970,387	+				-0.8
5,970,462	-		PFLU_RS26735	0.14	-0.9
5,970,462	-		PFLU_RS26735	0.14	-2.6
5,970,462	-		PFLU_RS26735	0.14	-1.8
5,970,462	-		PFLU_RS26735	0.14	-1.6
5,970,604	-		PFLU_RS26735	0.25	+0.4
5,970,604	-		PFLU_RS26735	0.25	-1.4
5,970,604	-		PFLU_RS26735	0.25	-2.3
5,970,604	-		PFLU_RS26735	0.25	-3.4
5,970,604	-		PFLU_RS26735	0.25	-2.6
5,970,639	-		PFLU_RS26735	0.27	-2.7
5,970,639	-		PFLU_RS26735	0.27	-1.3
5,970,639	-		PFLU_RS26735	0.27	-0.4
5,970,639	-		PFLU_RS26735	0.27	-2.0
5,970,639	-		PFLU_RS26735	0.27	-3.1
5,970,639	-		PFLU_RS26735	0.27	-1.9
5,970,639	-		PFLU_RS26735	0.27	-0.8
5,970,639	-		PFLU_RS26735	0.27	-1.5
5,970,639	-		PFLU_RS26735	0.27	-2.0
5,970,639	-		PFLU_RS26735	0.27	-1.5
5,970,645	+		PFLU_RS26735	0.28	-1.0
5,970,645	+		PFLU_RS26735	0.28	+0.1
5,970,645	+		PFLU_RS26735	0.28	-1.0
5,970,646	-		PFLU_RS26735	0.28	-1.0
5,970,646	-		PFLU_RS26735	0.28	-3.0