Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS13160

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
2,973,813	+		PFLU_RS13155	0.51	+0.8
2,973,813	+		PFLU_RS13155	0.51	+0.5
2,973,813	+		PFLU_RS13155	0.51	+1.7
2,973,814	-		PFLU_RS13155	0.51	-0.2
2,973,814	-		PFLU_RS13155	0.51	+2.0
2,973,814	-		PFLU_RS13155	0.51	+1.6
2,973,814	-		PFLU_RS13155	0.51	+1.6
2,973,814	-		PFLU_RS13155	0.51	+1.4
2,973,814	-		PFLU_RS13155	0.51	-1.5
2,973,814	-		PFLU_RS13155	0.51	+0.5
2,973,814	-		PFLU_RS13155	0.51	-1.5
2,973,814	-		PFLU_RS13155	0.51	-1.0
2,973,814	-		PFLU_RS13155	0.51	+0.5
2,974,024	+		PFLU_RS13155	0.67	-0.7
2,974,024	+		PFLU_RS13155	0.67	+1.3
2,974,024	+		PFLU_RS13155	0.67	-0.0
2,974,024	+		PFLU_RS13155	0.67	+0.9
2,974,024	+		PFLU_RS13155	0.67	-0.0
2,974,024	+		PFLU_RS13155	0.67	+0.1
2,974,024	+		PFLU_RS13155	0.67	+0.6
2,974,024	+		PFLU_RS13155	0.67	+0.0
2,974,024	+		PFLU_RS13155	0.67	-1.2
2,974,024	+		PFLU_RS13155	0.67	+0.7
2,974,024	+		PFLU_RS13155	0.67	-0.7
2,974,024	+		PFLU_RS13155	0.67	-0.6
2,974,024	+		PFLU_RS13155	0.67	+1.1
2,974,024	+		PFLU_RS13155	0.67	+0.3
2,974,025	-		PFLU_RS13155	0.67	-2.2
2,974,025	-		PFLU_RS13155	0.67	+2.2
2,974,025	-		PFLU_RS13155	0.67	+2.1
2,974,025	-		PFLU_RS13155	0.67	+0.7
2,974,025	-		PFLU_RS13155	0.67	+0.3
2,974,025	-		PFLU_RS13155	0.67	-1.0
2,974,025	-		PFLU_RS13155	0.67	+1.4
2,974,025	-		PFLU_RS13155	0.67	-1.1
2,974,025	-		PFLU_RS13155	0.67	+1.7
2,974,025	-		PFLU_RS13155	0.67	-1.0
2,974,025	-		PFLU_RS13155	0.67	+1.3
2,974,025	-		PFLU_RS13155	0.67	+1.8
2,974,025	-		PFLU_RS13155	0.67	-1.0
2,974,117	+		PFLU_RS13155	0.74	-0.3
2,974,118	-		PFLU_RS13155	0.74	-0.7
2,974,118	-		PFLU_RS13155	0.74	+2.1
2,974,238	+		PFLU_RS13155	0.83	+1.0
2,974,239	-		PFLU_RS13155	0.83	+3.3
2,974,314	+		PFLU_RS13155	0.89	+2.8
2,974,315	-		PFLU_RS13155	0.89	+0.4
2,974,315	-		PFLU_RS13155	0.89	+1.6
2,974,327	+		PFLU_RS13155	0.90	-1.3
2,974,327	+		PFLU_RS13155	0.90	+0.2
2,974,328	-		PFLU_RS13155	0.90	+0.9
2,974,328	-		PFLU_RS13155	0.90	-0.7
2,974,328	-		PFLU_RS13155	0.90	+1.3
2,974,328	-		PFLU_RS13155	0.90	+0.8
2,974,328	-		PFLU_RS13155	0.90	-0.1
2,974,328	-		PFLU_RS13155	0.90	-0.0
2,974,328	-		PFLU_RS13155	0.90	+1.6
2,974,498	+				+0.7
2,974,499	-				-0.5
2,974,529	-				-1.5
2,974,529	-				-2.7
2,974,529	-				+0.1
2,974,588	+				-2.0
2,974,588	+				-1.9
2,974,589	-				+0.6
2,974,589	-				+0.3
2,974,589	-				-1.9
2,974,589	-				+1.0
2,974,591	+				+1.3
2,974,591	+				-1.0
2,974,591	+				-2.3
2,974,591	+				+0.4
2,974,613	+				+0.7
2,974,613	+				+0.9
2,974,614	-				+1.0
2,974,614	-				-2.1
2,974,659	+				+0.7
2,974,660	-				-1.6
2,974,705	+				+3.3
2,974,706	-				+2.0
2,974,706	-				+1.1
2,974,754	+		PFLU_RS13160	0.13	-1.3
2,974,754	+		PFLU_RS13160	0.13	+1.7
2,974,754	+		PFLU_RS13160	0.13	-2.5
2,974,754	+		PFLU_RS13160	0.13	+0.6
2,974,755	-		PFLU_RS13160	0.13	-1.0
2,974,779	+		PFLU_RS13160	0.15	-1.4
2,974,780	-		PFLU_RS13160	0.15	-0.7
2,974,805	+		PFLU_RS13160	0.17	-2.8
2,974,805	+		PFLU_RS13160	0.17	+2.0
2,974,805	+		PFLU_RS13160	0.17	+1.1
2,974,805	+		PFLU_RS13160	0.17	+0.8
2,974,805	+		PFLU_RS13160	0.17	+0.3
2,974,805	+		PFLU_RS13160	0.17	+1.6
2,974,805	+		PFLU_RS13160	0.17	+2.0
2,974,805	+		PFLU_RS13160	0.17	+0.0
2,974,805	+		PFLU_RS13160	0.17	+0.1
2,974,805	+		PFLU_RS13160	0.17	+0.9
2,974,805	+		PFLU_RS13160	0.17	-2.8
2,974,805	+		PFLU_RS13160	0.17	+0.1
2,974,805	+		PFLU_RS13160	0.17	+0.6
2,974,805	+		PFLU_RS13160	0.17	-2.5
2,974,805	+		PFLU_RS13160	0.17	-0.3
2,974,805	+		PFLU_RS13160	0.17	+1.6
2,974,805	+		PFLU_RS13160	0.17	+1.9
2,974,805	+		PFLU_RS13160	0.17	+0.8
2,974,805	+		PFLU_RS13160	0.17	+0.3
2,974,806	-		PFLU_RS13160	0.17	-1.7
2,974,806	-		PFLU_RS13160	0.17	+2.6
2,974,806	-		PFLU_RS13160	0.17	-1.3
2,974,806	-		PFLU_RS13160	0.17	-2.0
2,974,806	-		PFLU_RS13160	0.17	-1.9
2,974,806	-		PFLU_RS13160	0.17	+2.2
2,974,806	-		PFLU_RS13160	0.17	+1.0
2,974,806	-		PFLU_RS13160	0.17	+1.7
2,974,806	-		PFLU_RS13160	0.17	+1.3
2,974,806	-		PFLU_RS13160	0.17	+0.5
2,974,806	-		PFLU_RS13160	0.17	+1.9
2,974,806	-		PFLU_RS13160	0.17	+2.4
2,974,806	-		PFLU_RS13160	0.17	-0.1
2,974,806	-		PFLU_RS13160	0.17	-0.9
2,974,806	-		PFLU_RS13160	0.17	+1.2
2,974,806	-		PFLU_RS13160	0.17	-0.7
2,974,806	-		PFLU_RS13160	0.17	+0.6
2,974,939	+		PFLU_RS13160	0.27	-0.0
2,974,939	+		PFLU_RS13160	0.27	+2.8
2,974,939	+		PFLU_RS13160	0.27	-0.3
2,974,940	-		PFLU_RS13160	0.28	+0.3
2,974,940	-		PFLU_RS13160	0.28	-0.2
2,974,940	-		PFLU_RS13160	0.28	-0.7
2,974,940	-		PFLU_RS13160	0.28	-0.8
2,974,940	-		PFLU_RS13160	0.28	+0.6
2,974,989	+		PFLU_RS13160	0.31	+0.3
2,974,990	-		PFLU_RS13160	0.31	+0.6
2,974,990	-		PFLU_RS13160	0.31	+0.4
2,975,000	+		PFLU_RS13160	0.32	+1.3
2,975,000	+		PFLU_RS13160	0.32	-1.0
2,975,001	-		PFLU_RS13160	0.32	+0.4
2,975,024	+		PFLU_RS13160	0.34	-0.2
2,975,044	+		PFLU_RS13160	0.35	+0.5
2,975,044	+		PFLU_RS13160	0.35	-1.6
2,975,044	+		PFLU_RS13160	0.35	-1.9
2,975,044	+		PFLU_RS13160	0.35	+1.3
2,975,044	+		PFLU_RS13160	0.35	+2.3
2,975,044	+		PFLU_RS13160	0.35	-1.3
2,975,044	+		PFLU_RS13160	0.35	+0.3
2,975,045	-		PFLU_RS13160	0.36	+1.0
2,975,045	-		PFLU_RS13160	0.36	+0.8
2,975,045	-		PFLU_RS13160	0.36	+1.9
2,975,045	-		PFLU_RS13160	0.36	+0.9
2,975,045	-		PFLU_RS13160	0.36	+1.5
2,975,045	-		PFLU_RS13160	0.36	+0.7
2,975,045	-		PFLU_RS13160	0.36	-0.3
2,975,168	-		PFLU_RS13160	0.45	+0.9
2,975,263	+		PFLU_RS13160	0.52	-0.3
2,975,264	-		PFLU_RS13160	0.52	+2.3
2,975,264	-		PFLU_RS13160	0.52	-0.1
2,975,278	+		PFLU_RS13160	0.53	-1.0
2,975,279	-		PFLU_RS13160	0.53	+0.9
2,975,279	-		PFLU_RS13160	0.53	-1.0
2,975,289	+		PFLU_RS13160	0.54	+0.9
2,975,290	-		PFLU_RS13160	0.54	-1.3
2,975,326	+		PFLU_RS13160	0.57	-0.1
2,975,326	+		PFLU_RS13160	0.57	+0.3
2,975,327	-		PFLU_RS13160	0.57	+2.6
2,975,327	-		PFLU_RS13160	0.57	-1.4
2,975,381	+		PFLU_RS13160	0.61	-0.6
2,975,382	-		PFLU_RS13160	0.61	+2.1
2,975,421	-		PFLU_RS13160	0.64	-0.4
2,975,452	+		PFLU_RS13160	0.67	-2.3
2,975,452	+		PFLU_RS13160	0.67	+0.7
2,975,452	+		PFLU_RS13160	0.67	+0.7
2,975,452	+		PFLU_RS13160	0.67	+1.4
2,975,452	+		PFLU_RS13160	0.67	+1.5
2,975,452	+		PFLU_RS13160	0.67	-2.4
2,975,453	-		PFLU_RS13160	0.67	-1.5
2,975,453	-		PFLU_RS13160	0.67	-2.2
2,975,453	-		PFLU_RS13160	0.67	-1.0
2,975,510	+		PFLU_RS13160	0.71	+0.6
2,975,512	+		PFLU_RS13160	0.71	-0.2
2,975,512	+		PFLU_RS13160	0.71	+2.0
2,975,512	+		PFLU_RS13160	0.71	+1.2
2,975,513	-		PFLU_RS13160	0.71	+0.9
2,975,513	-		PFLU_RS13160	0.71	+1.4
2,975,513	-		PFLU_RS13160	0.71	-0.0
2,975,513	-		PFLU_RS13160	0.71	+1.9
2,975,513	-		PFLU_RS13160	0.71	-1.5
2,975,519	+		PFLU_RS13160	0.72	-2.4
2,975,567	-		PFLU_RS13160	0.76	+1.1
2,975,567	-		PFLU_RS13160	0.76	+2.3
2,975,567	-		PFLU_RS13160	0.76	+1.7
2,975,567	-		PFLU_RS13160	0.76	-1.4
2,975,712	+		PFLU_RS13160	0.87	+1.1
2,975,818	+				-0.7
2,975,818	+				-0.1
2,975,818	+				-1.5
2,975,818	+				+0.9
2,975,818	+				+1.1
2,975,818	+				+0.5
2,975,818	+				+0.4
2,975,819	-				+1.0
2,975,819	-				+2.3
2,975,819	-				+1.5
2,975,819	-				-0.8
2,975,819	-				-2.3
2,975,819	-				-1.7
2,975,843	+				+0.4
2,975,843	+				+0.7
2,975,843	+				+1.0
2,975,843	+				+2.4
2,975,843	+				-1.5
2,975,843	+				-1.9
2,975,843	+				+3.7
2,975,844	-				+2.0
2,975,844	-				+1.2
2,975,847	+				-2.3
2,975,848	-				+1.9
2,975,848	-				-1.0
2,975,848	-				-0.3
2,975,848	-				-1.0
2,975,848	-				+0.9
2,975,865	+				+4.6
2,975,865	+				-1.9
2,975,866	-				-2.0
2,975,890	+				+3.9
2,975,890	+				+1.0
2,975,931	+				-1.0
2,975,931	+				-1.0
2,975,931	+				-2.3
2,975,931	+				-1.2
2,975,931	+				-1.0
2,975,931	+				-1.5
2,975,931	+				-2.8
2,975,931	+				+0.5
2,975,931	+				+0.8
2,975,931	+				-1.5
2,975,932	-				-0.3
2,975,932	-				-0.9
2,975,932	-				+0.8
2,975,932	-				-1.2
2,975,932	-				+1.0
2,975,932	-				-0.9
2,975,932	-				-1.5
2,975,932	-				-1.9
2,975,932	-				+0.8
2,975,953	+				+0.3
2,975,953	+				+1.7
2,975,953	+				-1.5
2,975,954	-				-1.0
2,975,961	+				-2.0
2,975,961	+				-1.0
2,975,961	+				+0.7
2,975,961	+				+1.8
2,975,962	-				-2.3
2,975,962	-				-2.4
2,975,962	-				+0.3
2,976,016	+		PFLU_RS13165	0.11	-1.3
2,976,017	-		PFLU_RS13165	0.11	+0.3
2,976,054	+		PFLU_RS13165	0.16	+1.2
2,976,054	+		PFLU_RS13165	0.16	+1.9
2,976,055	-		PFLU_RS13165	0.16	+0.6
2,976,055	-		PFLU_RS13165	0.16	+1.3
2,976,111	+		PFLU_RS13165	0.24	-0.3
2,976,112	-		PFLU_RS13165	0.24	+0.2
2,976,112	-		PFLU_RS13165	0.24	-1.0
2,976,112	-		PFLU_RS13165	0.24	-0.0
2,976,124	-		PFLU_RS13165	0.25	+1.3
2,976,169	+		PFLU_RS13165	0.31	+2.2
2,976,243	+		PFLU_RS13165	0.41	+1.3
2,976,243	+		PFLU_RS13165	0.41	+1.5
2,976,243	+		PFLU_RS13165	0.41	-0.7
2,976,243	+		PFLU_RS13165	0.41	+0.4
2,976,243	+		PFLU_RS13165	0.41	-0.3
2,976,243	+		PFLU_RS13165	0.41	-0.8
2,976,244	-		PFLU_RS13165	0.41	+0.8
2,976,293	+		PFLU_RS13165	0.48	+1.6
2,976,388	-		PFLU_RS13165	0.61	-1.3
2,976,399	+		PFLU_RS13165	0.62	-0.7
2,976,399	+		PFLU_RS13165	0.62	+0.7
2,976,399	+		PFLU_RS13165	0.62	-1.0
2,976,399	+		PFLU_RS13165	0.62	+0.2
2,976,400	-		PFLU_RS13165	0.62	+1.6
2,976,400	-		PFLU_RS13165	0.62	-0.3
2,976,400	-		PFLU_RS13165	0.62	+0.3
2,976,400	-		PFLU_RS13165	0.62	-0.3
2,976,431	+		PFLU_RS13165	0.66	+2.9
2,976,431	+		PFLU_RS13165	0.66	-2.6
2,976,432	-		PFLU_RS13165	0.67	+1.2
2,976,432	-		PFLU_RS13165	0.67	-1.4
2,976,432	-		PFLU_RS13165	0.67	-0.7
2,976,432	-		PFLU_RS13165	0.67	-1.3
2,976,444	+		PFLU_RS13165	0.68	+1.3
2,976,560	+		PFLU_RS13165	0.84	+0.8
2,976,560	+		PFLU_RS13165	0.84	+1.3
2,976,560	+		PFLU_RS13165	0.84	+2.0
2,976,560	+		PFLU_RS13165	0.84	+1.0
2,976,560	+		PFLU_RS13165	0.84	-0.4
2,976,626	+				-1.7
2,976,626	+				-2.5
2,976,627	-				-0.9
2,976,627	-				+1.1
2,976,627	-				-2.1
2,976,627	-				-0.2
2,976,627	-				-0.4
2,976,627	-				+1.1
2,976,710	-				-1.9
2,976,710	-				+0.9
2,976,722	+				+1.2
2,976,723	-				-0.3
2,976,723	-				-2.2
2,976,723	-				+0.4
2,976,848	+		PFLU_RS13170	0.19	-1.9
2,976,849	-		PFLU_RS13170	0.19	-0.4
2,976,849	-		PFLU_RS13170	0.19	-1.6