Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08595

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
1,914,896	+		PFLU_RS08590	0.17	-1.7
1,914,897	-		PFLU_RS08590	0.17	-0.2
1,914,897	-		PFLU_RS08590	0.17	+1.2
1,914,897	-		PFLU_RS08590	0.17	+0.6
1,914,898	+		PFLU_RS08590	0.17	+1.6
1,914,898	+		PFLU_RS08590	0.17	-0.5
1,914,898	+		PFLU_RS08590	0.17	-1.8
1,914,898	+		PFLU_RS08590	0.17	+0.8
1,914,898	+		PFLU_RS08590	0.17	+0.6
1,914,898	+		PFLU_RS08590	0.17	-1.2
1,914,898	+		PFLU_RS08590	0.17	-1.4
1,914,898	+		PFLU_RS08590	0.17	-0.7
1,914,898	+		PFLU_RS08590	0.17	+2.3
1,914,898	+		PFLU_RS08590	0.17	+0.9
1,914,898	+		PFLU_RS08590	0.17	-0.7
1,914,898	+		PFLU_RS08590	0.17	-1.1
1,914,898	+		PFLU_RS08590	0.17	-1.4
1,914,898	+		PFLU_RS08590	0.17	-0.7
1,914,898	+		PFLU_RS08590	0.17	-1.5
1,914,898	+		PFLU_RS08590	0.17	+0.7
1,914,898	+		PFLU_RS08590	0.17	-0.2
1,914,898	+		PFLU_RS08590	0.17	+0.7
1,914,898	+		PFLU_RS08590	0.17	+3.7
1,914,898	+		PFLU_RS08590	0.17	+1.5
1,914,898	+		PFLU_RS08590	0.17	-1.9
1,914,898	+		PFLU_RS08590	0.17	+0.9
1,914,898	+		PFLU_RS08590	0.17	-1.2
1,914,898	+		PFLU_RS08590	0.17	+1.3
1,914,898	+		PFLU_RS08590	0.17	-0.1
1,914,898	+		PFLU_RS08590	0.17	-2.8
1,914,898	+		PFLU_RS08590	0.17	+2.1
1,914,898	+		PFLU_RS08590	0.17	-0.6
1,914,898	+		PFLU_RS08590	0.17	-1.8
1,914,898	+		PFLU_RS08590	0.17	-0.5
1,914,898	+		PFLU_RS08590	0.17	+1.6
1,914,898	+		PFLU_RS08590	0.17	+0.8
1,914,899	-		PFLU_RS08590	0.17	-1.3
1,914,899	-		PFLU_RS08590	0.17	-1.3
1,914,899	-		PFLU_RS08590	0.17	+0.8
1,914,899	-		PFLU_RS08590	0.17	+2.3
1,914,899	-		PFLU_RS08590	0.17	-2.9
1,914,899	-		PFLU_RS08590	0.17	+2.3
1,914,899	-		PFLU_RS08590	0.17	+1.6
1,914,899	-		PFLU_RS08590	0.17	+0.9
1,914,899	-		PFLU_RS08590	0.17	+0.5
1,914,899	-		PFLU_RS08590	0.17	-0.4
1,914,899	-		PFLU_RS08590	0.17	-1.3
1,914,899	-		PFLU_RS08590	0.17	-0.8
1,914,899	-		PFLU_RS08590	0.17	+1.9
1,914,899	-		PFLU_RS08590	0.17	-1.2
1,914,899	-		PFLU_RS08590	0.17	+1.4
1,914,899	-		PFLU_RS08590	0.17	+0.7
1,914,899	-		PFLU_RS08590	0.17	-0.8
1,914,899	-		PFLU_RS08590	0.17	+0.9
1,914,899	-		PFLU_RS08590	0.17	+0.7
1,914,903	+		PFLU_RS08590	0.17	+0.0
1,914,903	+		PFLU_RS08590	0.17	-0.4
1,914,915	+		PFLU_RS08590	0.18	+1.1
1,914,915	+		PFLU_RS08590	0.18	+0.7
1,914,915	+		PFLU_RS08590	0.18	+0.7
1,914,915	+		PFLU_RS08590	0.18	+3.5
1,914,915	+		PFLU_RS08590	0.18	+0.3
1,914,916	-		PFLU_RS08590	0.18	-0.6
1,914,916	-		PFLU_RS08590	0.18	-0.7
1,915,094	+		PFLU_RS08590	0.33	-2.2
1,915,094	+		PFLU_RS08590	0.33	+2.1
1,915,094	+		PFLU_RS08590	0.33	-0.4
1,915,094	+		PFLU_RS08590	0.33	-0.9
1,915,094	+		PFLU_RS08590	0.33	+1.2
1,915,095	-		PFLU_RS08590	0.33	-1.1
1,915,098	+		PFLU_RS08590	0.33	+0.5
1,915,098	+		PFLU_RS08590	0.33	-1.3
1,915,098	+		PFLU_RS08590	0.33	+0.9
1,915,098	+		PFLU_RS08590	0.33	+0.3
1,915,099	-		PFLU_RS08590	0.33	-0.5
1,915,361	+		PFLU_RS08590	0.55	+0.9
1,915,362	-		PFLU_RS08590	0.55	-0.9
1,915,488	-		PFLU_RS08590	0.66	-2.2
1,915,633	+		PFLU_RS08590	0.78	-0.3
1,915,633	+		PFLU_RS08590	0.78	+0.1
1,915,633	+		PFLU_RS08590	0.78	+0.2
1,915,633	+		PFLU_RS08590	0.78	-0.9
1,915,633	+		PFLU_RS08590	0.78	-3.6
1,915,633	+		PFLU_RS08590	0.78	+2.2
1,915,633	+		PFLU_RS08590	0.78	-0.1
1,915,634	-		PFLU_RS08590	0.78	-2.2
1,915,634	-		PFLU_RS08590	0.78	-2.1
1,915,634	-		PFLU_RS08590	0.78	-0.2
1,915,634	-		PFLU_RS08590	0.78	-1.5
1,915,800	+				+0.1
1,915,800	+				-1.7
1,915,851	+				+0.7
1,915,851	+				-2.3
1,915,851	+				-1.2
1,915,851	+				-2.6
1,915,851	+				-0.2
1,915,851	+				-0.3
1,915,851	+				-3.0
1,915,851	+				-1.2
1,915,851	+				+1.1
1,915,852	-				+0.4
1,915,852	-				+1.2
1,915,852	-				-2.4
1,915,852	-				-0.7
1,915,852	-				+0.7
1,915,852	-				-3.2
1,915,852	-				+2.1
1,915,852	-				+0.6
1,915,852	-				+1.3
1,915,852	-				+0.9
1,915,854	+				+0.1
1,915,938	-				+0.9
1,916,059	+				-0.5
1,916,059	+				-0.2
1,916,059	+				+0.2
1,916,060	-				-0.9
1,916,060	-				+0.6
1,916,060	-				-0.4
1,916,273	+		PFLU_RS08595	0.22	+0.9
1,916,274	-		PFLU_RS08595	0.22	-1.0
1,916,274	-		PFLU_RS08595	0.22	-0.7
1,916,274	-		PFLU_RS08595	0.22	+0.4
1,916,430	+		PFLU_RS08595	0.31	-2.1
1,916,430	+		PFLU_RS08595	0.31	-0.9
1,916,430	+		PFLU_RS08595	0.31	-1.4
1,916,430	+		PFLU_RS08595	0.31	+0.3
1,916,430	+		PFLU_RS08595	0.31	+1.2
1,916,430	+		PFLU_RS08595	0.31	-0.7
1,916,430	+		PFLU_RS08595	0.31	-2.3
1,916,430	+		PFLU_RS08595	0.31	-2.0
1,916,430	+		PFLU_RS08595	0.31	+1.9
1,916,430	+		PFLU_RS08595	0.31	-1.3
1,916,430	+		PFLU_RS08595	0.31	-1.1
1,916,430	+		PFLU_RS08595	0.31	-2.5
1,916,430	+		PFLU_RS08595	0.31	-3.2
1,916,430	+		PFLU_RS08595	0.31	-1.6
1,916,430	+		PFLU_RS08595	0.31	-1.5
1,916,430	+		PFLU_RS08595	0.31	-1.5
1,916,430	+		PFLU_RS08595	0.31	-1.1
1,916,430	+		PFLU_RS08595	0.31	-2.4
1,916,431	-		PFLU_RS08595	0.31	-1.0
1,916,431	-		PFLU_RS08595	0.31	+0.6
1,916,431	-		PFLU_RS08595	0.31	-0.4
1,916,431	-		PFLU_RS08595	0.31	+0.0
1,916,431	-		PFLU_RS08595	0.31	-1.1
1,916,431	-		PFLU_RS08595	0.31	-0.9
1,916,431	-		PFLU_RS08595	0.31	-2.3
1,916,431	-		PFLU_RS08595	0.31	+0.7
1,916,431	-		PFLU_RS08595	0.31	-0.7
1,916,431	-		PFLU_RS08595	0.31	-0.9
1,916,431	-		PFLU_RS08595	0.31	-1.6
1,916,431	-		PFLU_RS08595	0.31	+1.5
1,916,431	-		PFLU_RS08595	0.31	+0.8
1,916,431	-		PFLU_RS08595	0.31	+0.5
1,916,431	-		PFLU_RS08595	0.31	+0.2
1,916,431	-		PFLU_RS08595	0.31	-1.9
1,916,431	-		PFLU_RS08595	0.31	+0.7
1,916,581	+		PFLU_RS08595	0.40	-2.4
1,916,757	+		PFLU_RS08595	0.50	-1.9
1,917,039	+		PFLU_RS08595	0.66	+0.2
1,917,039	+		PFLU_RS08595	0.66	-1.8
1,917,039	+		PFLU_RS08595	0.66	-0.7
1,917,040	-		PFLU_RS08595	0.66	+0.1
1,917,040	-		PFLU_RS08595	0.66	-0.4
1,917,101	+		PFLU_RS08595	0.70	+0.2
1,917,102	-		PFLU_RS08595	0.70	-1.2
1,917,102	-		PFLU_RS08595	0.70	-2.8
1,917,304	+		PFLU_RS08595	0.82	+0.6
1,917,304	+		PFLU_RS08595	0.82	-1.4
1,917,534	-				+0.1
1,917,534	-				-0.8
1,917,534	-				-2.7
1,917,677	+				+1.3
1,917,677	+				+2.3
1,917,677	+				+0.7
1,917,677	+				+0.9
1,917,677	+				-1.8
1,917,677	+				+1.6
1,917,678	-				-0.6
1,917,678	-				+1.3
1,917,678	-				-1.1
1,917,678	-				+1.8
1,917,678	-				+0.3
1,917,679	+				-0.4
1,917,679	+				+0.3
1,917,679	+				-0.4
1,917,679	+				+0.1
1,917,679	+				-1.7
1,917,679	+				-1.2
1,917,679	+				-0.6
1,917,679	+				-0.3
1,917,679	+				+0.4
1,917,679	+				-1.7
1,917,680	+				+0.8
1,917,680	-				+1.9
1,917,680	-				-0.4
1,917,680	-				+1.3
1,917,680	-				+2.7
1,917,680	-				-0.3
1,917,740	+				-0.7
1,917,741	-				+0.7
1,917,741	-				-0.1
1,917,741	-				+2.9
1,917,741	-				-2.3
1,917,753	+				+0.3
1,917,753	+				-0.6
1,917,753	+				-0.1
1,917,753	+				-0.3
1,917,754	-				+2.4
1,917,754	-				+1.2
1,917,754	-				-2.0
1,917,754	-				-1.1
1,917,754	-				-0.1
1,917,919	+		PFLU_RS08600	0.59	-0.2
1,917,919	+		PFLU_RS08600	0.59	+2.5
1,917,919	+		PFLU_RS08600	0.59	+2.4
1,917,919	+		PFLU_RS08600	0.59	-0.4
1,917,920	-		PFLU_RS08600	0.60	+0.3
1,917,920	-		PFLU_RS08600	0.60	+1.7
1,917,920	-		PFLU_RS08600	0.60	-0.1
1,917,920	-		PFLU_RS08600	0.60	+2.2
1,917,920	-		PFLU_RS08600	0.60	+3.6
1,918,037	+				+0.4
1,918,037	+				-0.9
1,918,037	+				+0.3
1,918,037	+				-1.1
1,918,037	+				+1.1
1,918,037	+				+1.5
1,918,037	+				+1.1
1,918,038	-				-0.4
1,918,038	-				-0.4
1,918,041	+				-0.9
1,918,041	+				-0.2
1,918,054	+				+2.5
1,918,076	+				+0.5
1,918,224	+		PFLU_RS08605	0.40	-0.7
1,918,224	+		PFLU_RS08605	0.40	+2.8
1,918,224	+		PFLU_RS08605	0.40	-0.4
1,918,224	+		PFLU_RS08605	0.40	-3.1
1,918,225	-		PFLU_RS08605	0.40	+0.4
1,918,294	+		PFLU_RS08605	0.61	+0.3
1,918,307	+		PFLU_RS08605	0.65	-1.2
1,918,307	+		PFLU_RS08605	0.65	+0.1
1,918,308	-		PFLU_RS08605	0.65	-0.4
1,918,308	-		PFLU_RS08605	0.65	+0.9
1,918,308	-		PFLU_RS08605	0.65	+0.9
1,918,308	-		PFLU_RS08605	0.65	+0.4
1,918,309	+		PFLU_RS08605	0.65	-0.5
1,918,309	+		PFLU_RS08605	0.65	-0.4
1,918,309	+		PFLU_RS08605	0.65	-1.4
1,918,309	+		PFLU_RS08605	0.65	-0.4
1,918,309	+		PFLU_RS08605	0.65	+1.9
1,918,309	+		PFLU_RS08605	0.65	+1.2
1,918,310	-		PFLU_RS08605	0.65	+2.7
1,918,310	-		PFLU_RS08605	0.65	-1.0
1,918,310	-		PFLU_RS08605	0.65	+2.2
1,918,310	-		PFLU_RS08605	0.65	-0.5
1,918,310	-		PFLU_RS08605	0.65	-0.8
1,918,318	+		PFLU_RS08605	0.68	-1.1
1,918,318	+		PFLU_RS08605	0.68	-1.8
1,918,319	-		PFLU_RS08605	0.68	+0.3
1,918,319	-		PFLU_RS08605	0.68	-1.2
1,918,435	+				-0.1
1,918,435	+				+0.4
1,918,436	-				+1.1
1,918,436	-				+0.2
1,918,545	+				-0.2
1,918,545	+				+1.9
1,918,545	+				+1.3
1,918,545	+				+1.0
1,918,545	+				+1.2
1,918,545	+				+0.4
1,918,545	+				+0.0
1,918,546	-				+0.1
1,918,546	-				+0.5
1,918,546	-				+0.1
1,918,546	-				-0.4
1,918,546	-				-0.2
1,918,546	-				-0.7