Experiment: NAG (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS02475 and PFLU_RS02480 are separated by 173 nucleotides PFLU_RS02480 and PFLU_RS02485 are separated by 123 nucleotides
PFLU_RS02475: PFLU_RS02475 - DNA topoisomerase IV subunit A, at 568,231 to 570,495
_RS02475
PFLU_RS02480: PFLU_RS02480 - hypothetical protein, at 570,669 to 571,382
_RS02480
PFLU_RS02485: PFLU_RS02485 - HAMP domain-containing protein, at 571,506 to 573,035
_RS02485
Position (kb) 570
571
572 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 570.503 kb on + strand at 570.503 kb on + strand at 570.504 kb on - strand at 570.518 kb on - strand at 570.518 kb on - strand at 570.532 kb on - strand at 570.565 kb on + strand at 570.565 kb on + strand at 570.566 kb on - strand at 570.578 kb on + strand at 570.578 kb on + strand at 570.579 kb on - strand at 570.614 kb on + strand at 570.614 kb on + strand at 570.614 kb on + strand at 570.614 kb on + strand at 570.615 kb on - strand at 570.615 kb on - strand at 570.615 kb on - strand at 570.625 kb on + strand at 570.625 kb on + strand at 570.626 kb on - strand at 570.626 kb on - strand at 570.628 kb on + strand at 570.628 kb on + strand at 570.628 kb on + strand at 570.628 kb on + strand at 570.629 kb on - strand at 570.629 kb on - strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.631 kb on + strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.632 kb on - strand at 570.695 kb on + strand at 570.696 kb on - strand at 570.696 kb on - strand at 570.696 kb on - strand at 570.696 kb on - strand at 570.759 kb on + strand, within PFLU_RS02480 at 570.759 kb on + strand, within PFLU_RS02480 at 570.759 kb on + strand, within PFLU_RS02480 at 570.759 kb on + strand, within PFLU_RS02480 at 570.759 kb on + strand, within PFLU_RS02480 at 570.760 kb on - strand, within PFLU_RS02480 at 570.760 kb on - strand, within PFLU_RS02480 at 570.843 kb on + strand, within PFLU_RS02480 at 570.843 kb on + strand, within PFLU_RS02480 at 570.844 kb on - strand, within PFLU_RS02480 at 570.844 kb on - strand, within PFLU_RS02480 at 570.844 kb on - strand, within PFLU_RS02480 at 570.844 kb on - strand, within PFLU_RS02480 at 570.844 kb on - strand, within PFLU_RS02480 at 570.844 kb on - strand, within PFLU_RS02480 at 570.925 kb on + strand, within PFLU_RS02480 at 570.925 kb on + strand, within PFLU_RS02480 at 570.925 kb on + strand, within PFLU_RS02480 at 570.926 kb on - strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.027 kb on + strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.028 kb on - strand, within PFLU_RS02480 at 571.064 kb on + strand, within PFLU_RS02480 at 571.064 kb on + strand, within PFLU_RS02480 at 571.065 kb on - strand, within PFLU_RS02480 at 571.123 kb on + strand, within PFLU_RS02480 at 571.123 kb on + strand, within PFLU_RS02480 at 571.124 kb on - strand, within PFLU_RS02480 at 571.124 kb on - strand, within PFLU_RS02480 at 571.167 kb on - strand, within PFLU_RS02480 at 571.355 kb on + strand at 571.396 kb on + strand at 571.397 kb on - strand at 571.428 kb on + strand at 571.429 kb on - strand at 571.429 kb on - strand at 571.429 kb on - strand at 571.429 kb on - strand at 571.499 kb on + strand at 571.500 kb on - strand at 571.507 kb on + strand at 571.507 kb on + strand at 571.507 kb on + strand at 571.508 kb on - strand at 571.508 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction NAG (C) remove 570,503 + +1.9 570,503 + -1.9 570,504 - -2.3 570,518 - +2.6 570,518 - +0.5 570,532 - +1.1 570,565 + +0.1 570,565 + -0.2 570,566 - -1.5 570,578 + +0.9 570,578 + -0.1 570,579 - +3.4 570,614 + +1.5 570,614 + -0.9 570,614 + +0.9 570,614 + +0.9 570,615 - +1.4 570,615 - +2.8 570,615 - +0.9 570,625 + -2.0 570,625 + -1.8 570,626 - -0.5 570,626 - +0.8 570,628 + -1.9 570,628 + -0.0 570,628 + +0.3 570,628 + +2.5 570,629 - +2.8 570,629 - -2.5 570,631 + -0.1 570,631 + +1.0 570,631 + -0.9 570,631 + -2.4 570,631 + +1.6 570,631 + +1.9 570,631 + -1.1 570,631 + +1.5 570,631 + +3.1 570,631 + +2.3 570,631 + -1.5 570,631 + -1.9 570,631 + +0.4 570,631 + +0.7 570,631 + -0.3 570,631 + -2.1 570,631 + +0.8 570,631 + -0.3 570,631 + -1.3 570,631 + +1.5 570,631 + -0.9 570,631 + +0.9 570,631 + +0.9 570,632 - +0.6 570,632 - -1.6 570,632 - -0.5 570,632 - +1.0 570,632 - -1.7 570,632 - +4.1 570,632 - -0.2 570,632 - -1.2 570,632 - -1.1 570,632 - +1.9 570,632 - +1.3 570,632 - +0.3 570,632 - -0.1 570,632 - +1.3 570,632 - -1.5 570,632 - +1.6 570,632 - +1.4 570,632 - -1.3 570,632 - +0.5 570,632 - -0.8 570,632 - +0.1 570,695 + +0.7 570,696 - +0.4 570,696 - -1.8 570,696 - +0.4 570,696 - +0.6 570,759 + PFLU_RS02480 0.13 -0.3 570,759 + PFLU_RS02480 0.13 -3.1 570,759 + PFLU_RS02480 0.13 +0.5 570,759 + PFLU_RS02480 0.13 -1.9 570,759 + PFLU_RS02480 0.13 +1.7 570,760 - PFLU_RS02480 0.13 -2.4 570,760 - PFLU_RS02480 0.13 +1.9 570,843 + PFLU_RS02480 0.24 -1.6 570,843 + PFLU_RS02480 0.24 -1.3 570,844 - PFLU_RS02480 0.25 +1.9 570,844 - PFLU_RS02480 0.25 +1.1 570,844 - PFLU_RS02480 0.25 +1.1 570,844 - PFLU_RS02480 0.25 +0.1 570,844 - PFLU_RS02480 0.25 -2.1 570,844 - PFLU_RS02480 0.25 +1.9 570,925 + PFLU_RS02480 0.36 -1.8 570,925 + PFLU_RS02480 0.36 +0.1 570,925 + PFLU_RS02480 0.36 -1.1 570,926 - PFLU_RS02480 0.36 +1.9 571,027 + PFLU_RS02480 0.50 +0.4 571,027 + PFLU_RS02480 0.50 -0.5 571,027 + PFLU_RS02480 0.50 +0.8 571,027 + PFLU_RS02480 0.50 -0.7 571,027 + PFLU_RS02480 0.50 +1.1 571,027 + PFLU_RS02480 0.50 -0.7 571,027 + PFLU_RS02480 0.50 -0.5 571,027 + PFLU_RS02480 0.50 +0.6 571,027 + PFLU_RS02480 0.50 -0.3 571,027 + PFLU_RS02480 0.50 -0.7 571,028 - PFLU_RS02480 0.50 +0.1 571,028 - PFLU_RS02480 0.50 -0.3 571,028 - PFLU_RS02480 0.50 -1.1 571,028 - PFLU_RS02480 0.50 +0.2 571,028 - PFLU_RS02480 0.50 +1.9 571,028 - PFLU_RS02480 0.50 -3.1 571,028 - PFLU_RS02480 0.50 +0.8 571,028 - PFLU_RS02480 0.50 -0.4 571,028 - PFLU_RS02480 0.50 +0.7 571,028 - PFLU_RS02480 0.50 +3.7 571,064 + PFLU_RS02480 0.55 +0.5 571,064 + PFLU_RS02480 0.55 +1.0 571,065 - PFLU_RS02480 0.55 +1.5 571,123 + PFLU_RS02480 0.64 +1.2 571,123 + PFLU_RS02480 0.64 -1.8 571,124 - PFLU_RS02480 0.64 -1.1 571,124 - PFLU_RS02480 0.64 +2.0 571,167 - PFLU_RS02480 0.70 -2.1 571,355 + -0.7 571,396 + -0.1 571,397 - -0.9 571,428 + +0.3 571,429 - +1.2 571,429 - +1.5 571,429 - +3.2 571,429 - -1.5 571,499 + -2.6 571,500 - -1.0 571,507 + -1.7 571,507 + +0.9 571,507 + +0.4 571,508 - -2.4 571,508 - +1.4
Or see this region's nucleotide sequence