Experiment: L-Tryptophan (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO353_24095 and AO353_24100 are separated by 66 nucleotides AO353_24100 and AO353_24105 are separated by 40 nucleotides AO353_24105 and AO353_24110 are separated by 267 nucleotides
AO353_24095: AO353_24095 - multidrug DMT transporter permease, at 5,304,095 to 5,304,994
_24095
AO353_24100: AO353_24100 - hypothetical protein, at 5,305,061 to 5,305,318
_24100
AO353_24105: AO353_24105 - LysR family transcriptional regulator, at 5,305,359 to 5,306,273
_24105
AO353_24110: AO353_24110 - alcohol dehydrogenase, at 5,306,541 to 5,307,563
_24110
Position (kb) 5305
5306
5307 Strain fitness (log2 ratio) -1
0
1
2
3 at 5304.371 kb on - strand, within AO353_24095 at 5304.392 kb on + strand, within AO353_24095 at 5304.393 kb on - strand, within AO353_24095 at 5304.546 kb on - strand, within AO353_24095 at 5304.587 kb on + strand, within AO353_24095 at 5304.627 kb on + strand, within AO353_24095 at 5304.731 kb on + strand, within AO353_24095 at 5304.732 kb on - strand, within AO353_24095 at 5304.732 kb on - strand, within AO353_24095 at 5304.732 kb on - strand, within AO353_24095 at 5304.782 kb on + strand, within AO353_24095 at 5304.782 kb on + strand, within AO353_24095 at 5304.783 kb on - strand, within AO353_24095 at 5304.783 kb on - strand, within AO353_24095 at 5304.783 kb on - strand, within AO353_24095 at 5304.837 kb on - strand, within AO353_24095 at 5304.992 kb on + strand at 5305.013 kb on - strand at 5305.236 kb on + strand, within AO353_24100 at 5305.237 kb on - strand, within AO353_24100 at 5305.305 kb on - strand at 5305.305 kb on - strand at 5305.404 kb on + strand at 5305.531 kb on + strand, within AO353_24105 at 5305.767 kb on + strand, within AO353_24105 at 5305.807 kb on + strand, within AO353_24105 at 5305.808 kb on - strand, within AO353_24105 at 5305.808 kb on - strand, within AO353_24105 at 5305.808 kb on - strand, within AO353_24105 at 5305.857 kb on + strand, within AO353_24105 at 5305.857 kb on + strand, within AO353_24105 at 5305.857 kb on + strand, within AO353_24105 at 5305.857 kb on + strand, within AO353_24105 at 5305.858 kb on - strand, within AO353_24105 at 5305.858 kb on - strand, within AO353_24105 at 5305.858 kb on - strand, within AO353_24105 at 5305.858 kb on - strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.861 kb on + strand, within AO353_24105 at 5305.862 kb on - strand, within AO353_24105 at 5305.862 kb on - strand, within AO353_24105 at 5305.862 kb on - strand, within AO353_24105 at 5305.862 kb on - strand, within AO353_24105 at 5305.862 kb on - strand, within AO353_24105 at 5305.862 kb on - strand, within AO353_24105 at 5306.087 kb on + strand, within AO353_24105 at 5306.088 kb on - strand, within AO353_24105 at 5306.090 kb on + strand, within AO353_24105 at 5306.090 kb on + strand, within AO353_24105 at 5306.091 kb on - strand, within AO353_24105 at 5306.091 kb on - strand, within AO353_24105 at 5306.091 kb on - strand, within AO353_24105 at 5306.091 kb on - strand, within AO353_24105 at 5306.091 kb on - strand, within AO353_24105 at 5306.265 kb on - strand at 5306.316 kb on + strand at 5306.316 kb on + strand at 5306.316 kb on + strand at 5306.316 kb on + strand at 5306.316 kb on + strand at 5306.317 kb on - strand at 5306.317 kb on - strand at 5306.343 kb on + strand at 5306.359 kb on + strand at 5306.359 kb on + strand at 5306.374 kb on - strand at 5306.408 kb on + strand at 5306.408 kb on + strand at 5306.422 kb on + strand at 5306.422 kb on + strand at 5306.422 kb on + strand at 5306.461 kb on + strand at 5306.461 kb on + strand at 5306.464 kb on + strand at 5306.464 kb on + strand at 5306.464 kb on + strand at 5306.464 kb on + strand at 5306.464 kb on + strand at 5306.500 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Tryptophan (N) remove 5,304,371 - AO353_24095 0.31 +0.1 5,304,392 + AO353_24095 0.33 -1.4 5,304,393 - AO353_24095 0.33 -1.0 5,304,546 - AO353_24095 0.50 +0.4 5,304,587 + AO353_24095 0.55 +1.7 5,304,627 + AO353_24095 0.59 -0.7 5,304,731 + AO353_24095 0.71 -1.0 5,304,732 - AO353_24095 0.71 -0.8 5,304,732 - AO353_24095 0.71 +0.1 5,304,732 - AO353_24095 0.71 +1.3 5,304,782 + AO353_24095 0.76 -1.0 5,304,782 + AO353_24095 0.76 -0.4 5,304,783 - AO353_24095 0.76 +1.3 5,304,783 - AO353_24095 0.76 +1.5 5,304,783 - AO353_24095 0.76 -0.1 5,304,837 - AO353_24095 0.82 -1.0 5,304,992 + -0.3 5,305,013 - +0.3 5,305,236 + AO353_24100 0.68 +1.3 5,305,237 - AO353_24100 0.68 -0.6 5,305,305 - -0.7 5,305,305 - +0.1 5,305,404 + -0.1 5,305,531 + AO353_24105 0.19 -0.3 5,305,767 + AO353_24105 0.45 -0.9 5,305,807 + AO353_24105 0.49 -0.1 5,305,808 - AO353_24105 0.49 +0.3 5,305,808 - AO353_24105 0.49 +0.2 5,305,808 - AO353_24105 0.49 +0.2 5,305,857 + AO353_24105 0.54 -0.3 5,305,857 + AO353_24105 0.54 -0.7 5,305,857 + AO353_24105 0.54 -0.9 5,305,857 + AO353_24105 0.54 +2.9 5,305,858 - AO353_24105 0.55 -0.6 5,305,858 - AO353_24105 0.55 -0.1 5,305,858 - AO353_24105 0.55 -0.3 5,305,858 - AO353_24105 0.55 -0.5 5,305,861 + AO353_24105 0.55 -1.1 5,305,861 + AO353_24105 0.55 -1.3 5,305,861 + AO353_24105 0.55 +0.7 5,305,861 + AO353_24105 0.55 +1.2 5,305,861 + AO353_24105 0.55 -0.3 5,305,861 + AO353_24105 0.55 +0.0 5,305,861 + AO353_24105 0.55 -0.3 5,305,861 + AO353_24105 0.55 -1.3 5,305,861 + AO353_24105 0.55 +0.1 5,305,862 - AO353_24105 0.55 -0.7 5,305,862 - AO353_24105 0.55 -0.1 5,305,862 - AO353_24105 0.55 +0.7 5,305,862 - AO353_24105 0.55 +0.5 5,305,862 - AO353_24105 0.55 +0.3 5,305,862 - AO353_24105 0.55 -0.5 5,306,087 + AO353_24105 0.80 -0.0 5,306,088 - AO353_24105 0.80 -1.1 5,306,090 + AO353_24105 0.80 +0.2 5,306,090 + AO353_24105 0.80 +0.9 5,306,091 - AO353_24105 0.80 -0.6 5,306,091 - AO353_24105 0.80 +0.1 5,306,091 - AO353_24105 0.80 +1.3 5,306,091 - AO353_24105 0.80 -1.6 5,306,091 - AO353_24105 0.80 -0.3 5,306,265 - +2.9 5,306,316 + -0.1 5,306,316 + +0.3 5,306,316 + -1.5 5,306,316 + -0.8 5,306,316 + -1.1 5,306,317 - -0.3 5,306,317 - -0.4 5,306,343 + +0.8 5,306,359 + +0.2 5,306,359 + -1.0 5,306,374 - +0.0 5,306,408 + +0.5 5,306,408 + -1.4 5,306,422 + -0.4 5,306,422 + -0.6 5,306,422 + +0.6 5,306,461 + -0.6 5,306,461 + -1.0 5,306,464 + -0.4 5,306,464 + -0.3 5,306,464 + +0.6 5,306,464 + +0.6 5,306,464 + +0.1 5,306,500 + +2.0
Or see this region's nucleotide sequence