Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_002526

Experiment: Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
2,847,323	+		ABIE53_002524	0.61	-0.1
2,847,323	+		ABIE53_002524	0.61	-0.4
2,847,324	-		ABIE53_002524	0.61	+0.5
2,847,324	-		ABIE53_002524	0.61	-0.9
2,847,324	-		ABIE53_002524	0.61	-0.4
2,847,324	-		ABIE53_002524	0.61	+0.4
2,847,424	+		ABIE53_002524	0.69	+3.4
2,847,424	+		ABIE53_002524	0.69	-0.0
2,847,424	+		ABIE53_002524	0.69	-0.9
2,847,424	+		ABIE53_002524	0.69	-1.2
2,847,424	+		ABIE53_002524	0.69	+1.4
2,847,424	+		ABIE53_002524	0.69	-1.4
2,847,424	+		ABIE53_002524	0.69	-1.4
2,847,425	-		ABIE53_002524	0.69	+0.4
2,847,425	-		ABIE53_002524	0.69	-0.7
2,847,425	-		ABIE53_002524	0.69	-1.4
2,847,425	-		ABIE53_002524	0.69	-0.7
2,847,425	-		ABIE53_002524	0.69	-0.6
2,847,425	-		ABIE53_002524	0.69	-2.2
2,847,425	-		ABIE53_002524	0.69	+0.1
2,847,425	-		ABIE53_002524	0.69	-0.9
2,847,671	+		ABIE53_002524	0.89	+0.2
2,847,672	-		ABIE53_002524	0.89	+0.4
2,847,672	-		ABIE53_002524	0.89	+0.3
2,847,672	-		ABIE53_002524	0.89	+0.4
2,847,672	-		ABIE53_002524	0.89	-0.6
2,847,672	-		ABIE53_002524	0.89	+0.6
2,847,721	+				-0.4
2,847,721	+				+0.4
2,847,722	-				-0.5
2,847,722	-				-0.2
2,847,806	-				-1.6
2,847,853	+				+2.4
2,847,853	+				-1.1
2,847,854	-				-0.2
2,847,910	+		ABIE53_002525	0.21	-1.4
2,847,910	+		ABIE53_002525	0.21	-1.0
2,847,910	+		ABIE53_002525	0.21	-1.2
2,847,910	+		ABIE53_002525	0.21	-0.9
2,848,092	+		ABIE53_002525	0.86	-2.3
2,848,166	+				-0.2
2,848,167	-				-0.2
2,848,167	-				-1.4
2,848,167	-				+1.3
2,848,179	+				-1.6
2,848,179	+				+1.4
2,848,180	-				-1.8
2,848,222	+				-0.7
2,848,222	+				+0.3
2,848,223	-				-1.8
2,848,223	-				+1.0
2,848,223	-				+1.0
2,848,288	-				-1.2
2,848,297	+				-0.0
2,848,297	+				+0.8
2,848,297	+				-1.0
2,848,297	+				-0.6
2,848,297	+				+2.0
2,848,297	+				+1.4
2,848,297	+				-0.3
2,848,325	-				+0.2
2,848,325	-				-2.0
2,848,346	+				+4.6
2,848,346	+				+0.4
2,848,346	+				+1.4
2,848,346	+				+1.6
2,848,346	+				-0.7
2,848,347	-				-0.9
2,848,347	-				-0.0
2,848,347	-				-1.4
2,848,347	-				-0.7
2,848,355	+				+0.7
2,848,355	+				-0.2
2,848,355	+				-0.6
2,848,355	+				-1.9
2,848,356	-				+0.6
2,848,356	-				-0.9
2,848,513	+		ABIE53_002526	0.16	-0.6
2,848,513	+		ABIE53_002526	0.16	+2.1
2,848,513	+		ABIE53_002526	0.16	-0.1
2,848,947	+		ABIE53_002526	0.48	-0.6
2,848,947	+		ABIE53_002526	0.48	+2.4
2,848,947	+		ABIE53_002526	0.48	-0.6
2,848,947	+		ABIE53_002526	0.48	-0.9
2,848,947	+		ABIE53_002526	0.48	-0.1
2,848,947	+		ABIE53_002526	0.48	-0.6
2,848,948	-		ABIE53_002526	0.48	+0.6
2,848,948	-		ABIE53_002526	0.48	-0.7
2,848,948	-		ABIE53_002526	0.48	-1.6
2,848,948	-		ABIE53_002526	0.48	-0.3
2,848,966	+		ABIE53_002526	0.49	-0.9
2,848,966	+		ABIE53_002526	0.49	+0.4
2,848,966	+		ABIE53_002526	0.49	+2.6
2,848,967	-		ABIE53_002526	0.49	-2.3
2,848,967	-		ABIE53_002526	0.49	+1.4
2,848,967	-		ABIE53_002526	0.49	+1.4
2,848,967	-		ABIE53_002526	0.49	+0.7
2,849,124	+		ABIE53_002526	0.61	-1.5
2,849,124	+		ABIE53_002526	0.61	-0.1
2,849,124	+		ABIE53_002526	0.61	-0.6
2,849,125	-		ABIE53_002526	0.61	-0.9
2,849,125	-		ABIE53_002526	0.61	+1.4
2,849,307	+		ABIE53_002526	0.74	+1.4
2,849,307	+		ABIE53_002526	0.74	+0.6
2,849,307	+		ABIE53_002526	0.74	-0.1
2,849,308	-		ABIE53_002526	0.74	+2.1
2,849,308	-		ABIE53_002526	0.74	+0.3
2,849,308	-		ABIE53_002526	0.74	+0.4
2,849,308	-		ABIE53_002526	0.74	+0.4
2,849,636	+				+0.3
2,849,636	+				+0.1
2,849,636	+				-1.9
2,849,636	+				+2.0
2,849,636	+				-0.5
2,849,636	+				-0.1
2,849,636	+				+1.4
2,849,636	+				-1.6
2,849,636	+				-0.1
2,849,636	+				-0.1
2,849,636	+				-0.0
2,849,636	+				-2.1
2,849,636	+				+0.1
2,849,637	-				-0.3
2,849,637	-				-0.5
2,849,637	-				-0.9
2,849,637	-				+0.4
2,849,637	-				+2.0
2,849,637	-				-0.1
2,849,637	-				-0.2
2,849,637	-				+0.6
2,849,637	-				-0.5
2,849,637	-				-1.1
2,849,637	-				+1.2
2,849,637	-				-0.1
2,849,637	-				+1.4
2,849,637	-				-0.5
2,849,640	+				+1.4
2,849,640	+				-0.6
2,849,640	+				-2.2
2,849,640	+				-0.9
2,849,640	+				-2.1
2,849,640	+				-1.6
2,849,640	+				-1.1
2,849,640	+				+1.0
2,849,640	+				+0.1
2,849,640	+				-1.3
2,849,640	+				-1.2
2,849,640	+				-0.9
2,849,640	+				-2.6
2,849,640	+				+0.5
2,849,640	+				+0.0
2,849,640	+				-0.1
2,849,640	+				+1.4
2,849,640	+				+2.2
2,849,640	+				-1.2
2,849,640	+				-1.1
2,849,641	-				+2.0
2,849,641	-				+0.3
2,849,641	-				+0.4
2,849,641	-				-1.5
2,849,641	-				-0.1
2,849,641	-				+2.6
2,849,641	-				+2.7
2,849,641	-				+2.4
2,849,641	-				-1.1
2,849,641	-				+0.3
2,849,641	-				-0.1
2,849,641	-				+0.9
2,849,641	-				+0.2
2,849,641	-				+0.3
2,849,641	-				+0.9
2,849,641	-				+0.4
2,849,641	-				-0.8
2,849,690	+				+0.1
2,849,690	+				-0.6
2,849,690	+				-2.7
2,849,690	+				-1.6
2,849,690	+				-0.1
2,849,691	-				+1.4
2,849,691	-				+0.0
2,849,691	-				+1.6
2,849,691	-				-0.1
2,849,691	-				-0.1
2,849,691	-				+0.9
2,849,691	-				+1.4
2,849,691	-				+0.4
2,849,691	-				-1.7
2,849,691	-				-0.2
2,849,721	+				+0.9
2,849,721	+				-1.6
2,849,721	+				-3.1
2,849,721	+				+1.9
2,849,722	-				-0.6
2,849,722	-				-2.1
2,849,722	-				-0.1
2,849,722	-				+1.1
2,849,722	-				+1.0
2,849,722	-				+1.2