Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_000105

Experiment: Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant=Arabidopsis_thaliana; PlantTreatment=None; Sample=soil; GrowthSubstrate=quartz_sand; Collection=outgrowth_R2A_with_Tween_and_Cycloheximide; Time=21_days
112,147	+		ABIE53_000103	0.75	+1.1
112,147	+		ABIE53_000103	0.75	+1.5
112,148	-		ABIE53_000103	0.75	+0.8
112,148	-		ABIE53_000103	0.75	-0.1
112,148	-		ABIE53_000103	0.75	+2.7
112,180	+		ABIE53_000103	0.77	+1.3
112,180	+		ABIE53_000103	0.77	+2.4
112,180	+		ABIE53_000103	0.77	+0.5
112,180	+		ABIE53_000103	0.77	+0.5
112,180	+		ABIE53_000103	0.77	-0.4
112,180	+		ABIE53_000103	0.77	+0.6
112,180	+		ABIE53_000103	0.77	+2.7
112,180	+		ABIE53_000103	0.77	+0.5
112,180	+		ABIE53_000103	0.77	+0.8
112,180	+		ABIE53_000103	0.77	+1.2
112,180	+		ABIE53_000103	0.77	+0.5
112,180	+		ABIE53_000103	0.77	+1.7
112,180	+		ABIE53_000103	0.77	+2.2
112,180	+		ABIE53_000103	0.77	+3.9
112,180	+		ABIE53_000103	0.77	+3.2
112,180	+		ABIE53_000103	0.77	+1.6
112,180	+		ABIE53_000103	0.77	+0.7
112,180	+		ABIE53_000103	0.77	+0.6
112,180	+		ABIE53_000103	0.77	+2.8
112,180	+		ABIE53_000103	0.77	+0.9
112,180	+		ABIE53_000103	0.77	+2.3
112,180	+		ABIE53_000103	0.77	+1.3
112,180	+		ABIE53_000103	0.77	+1.6
112,180	+		ABIE53_000103	0.77	+0.3
112,180	+		ABIE53_000103	0.77	+3.2
112,180	+		ABIE53_000103	0.77	+3.0
112,180	+		ABIE53_000103	0.77	+1.3
112,180	+		ABIE53_000103	0.77	+0.6
112,180	+		ABIE53_000103	0.77	-0.5
112,180	+		ABIE53_000103	0.77	+1.6
112,181	-		ABIE53_000103	0.77	+0.5
112,181	-		ABIE53_000103	0.77	+2.9
112,181	-		ABIE53_000103	0.77	+1.8
112,181	-		ABIE53_000103	0.77	+0.7
112,181	-		ABIE53_000103	0.77	+1.8
112,181	-		ABIE53_000103	0.77	-0.7
112,181	-		ABIE53_000103	0.77	+4.4
112,181	-		ABIE53_000103	0.77	-1.8
112,181	-		ABIE53_000103	0.77	+1.0
112,181	-		ABIE53_000103	0.77	+1.2
112,181	-		ABIE53_000103	0.77	+0.3
112,181	-		ABIE53_000103	0.77	-0.7
112,181	-		ABIE53_000103	0.77	-0.2
112,181	-		ABIE53_000103	0.77	-0.0
112,181	-		ABIE53_000103	0.77	-2.1
112,181	-		ABIE53_000103	0.77	+0.6
112,181	-		ABIE53_000103	0.77	+1.5
112,181	-		ABIE53_000103	0.77	-1.2
112,181	-		ABIE53_000103	0.77	+0.9
112,181	-		ABIE53_000103	0.77	+1.0
112,181	-		ABIE53_000103	0.77	+0.5
112,181	-		ABIE53_000103	0.77	+2.5
112,184	-		ABIE53_000103	0.77	-0.7
112,184	-		ABIE53_000103	0.77	+1.1
112,598	-				-1.2
112,619	+				-0.8
112,619	+				-0.0
112,619	+				-0.3
112,619	+				-1.6
112,619	+				-0.0
112,619	+				+1.1
112,620	-				-0.0
112,620	-				-0.7
112,620	-				+2.7
112,690	+				-0.4
113,056	+				-0.8
113,056	+				-1.4
113,056	+				-1.2
113,056	+				+0.0
113,057	-				+1.0
113,057	-				+0.6
113,057	-				-1.8
113,057	-				-4.2
113,057	-				-0.4
113,057	-				-1.0
113,073	+				+1.6
113,073	+				-0.4
113,073	+				+3.6
113,073	+				+1.9
113,074	-				-0.7
113,189	+		ABIE53_000105	0.21	+0.7
113,189	+		ABIE53_000105	0.21	+0.7
113,189	+		ABIE53_000105	0.21	+2.2
113,189	+		ABIE53_000105	0.21	-2.2
113,190	-		ABIE53_000105	0.21	-1.6
113,190	-		ABIE53_000105	0.21	-2.0
113,190	-		ABIE53_000105	0.21	-0.0
113,190	-		ABIE53_000105	0.21	-3.0
113,242	+		ABIE53_000105	0.31	-0.9
113,242	+		ABIE53_000105	0.31	-2.2
113,243	-		ABIE53_000105	0.31	-0.4
113,243	-		ABIE53_000105	0.31	+1.3
113,243	-		ABIE53_000105	0.31	-4.1
113,464	+		ABIE53_000105	0.73	+3.3
113,464	+		ABIE53_000105	0.73	-0.9
113,465	-		ABIE53_000105	0.74	-1.6
113,501	+		ABIE53_000105	0.80	-1.1
113,501	+		ABIE53_000105	0.80	-2.1
113,501	+		ABIE53_000105	0.80	+0.7
113,501	+		ABIE53_000105	0.80	-0.0
113,501	+		ABIE53_000105	0.80	-0.0
113,501	+		ABIE53_000105	0.80	-0.9
113,501	+		ABIE53_000105	0.80	+0.6
113,558	+				-0.8
113,558	+				-2.1
113,558	+				-0.3
113,558	+				-1.0
113,558	+				+1.9
113,558	+				-0.0
113,558	+				+2.2
113,558	+				-0.1
113,558	+				+1.6
113,559	-				-0.4
113,559	-				-3.6
113,559	-				+0.2
113,575	+				+2.3
113,575	+				-0.8
113,575	+				-0.4
113,575	+				+0.1
113,575	+				+0.2
113,576	-				+0.6
113,576	-				-0.1
113,600	+				-1.0
113,600	+				+0.3
113,600	+				-0.0
113,600	+				-0.0
113,600	+				-0.1
113,600	+				-0.4
113,600	+				-0.8
113,601	-				-0.7
113,601	-				-1.2
113,601	-				+0.0
113,601	-				-1.0
113,697	+				+1.6
113,698	-				+1.6
113,747	+				+0.3
113,747	+				-1.0
113,747	+				-1.6
113,747	+				+2.2
113,748	-				+0.2
113,748	-				-0.2
113,750	+				+0.2
113,750	+				-3.5
113,750	+				+1.5
113,750	+				-0.6
113,750	+				+2.8
113,750	+				-2.0
113,750	+				-0.1
113,750	+				-0.2
113,750	+				+1.6
113,750	+				-0.3
113,750	+				-0.7
113,751	-				-0.4
113,751	-				-0.0
113,751	-				+2.0
113,751	-				-1.4
113,751	-				-2.1
113,751	-				-0.0
113,751	-				-1.3
113,751	-				-2.3
113,751	-				-1.6
113,751	-				-1.0
113,751	-				-1.3
113,860	+				-0.7
113,860	+				+0.7
113,860	+				+1.6
113,860	+				-1.6
113,861	-				-1.0
113,861	-				-0.6
113,861	-				+0.7
113,861	-				-0.6
113,861	-				-1.0
113,861	-				+2.0
113,861	-				-0.4
113,861	-				+1.8
113,861	-				+2.6
113,861	-				-0.8
113,861	-				-1.2
113,861	-				-0.4
113,861	-				-0.2
113,861	-				-0.5
113,976	-				-1.9
114,017	+				-0.4
114,017	+				+0.8
114,017	+				-1.0
114,017	+				+0.6
114,017	+				-0.0
114,018	-				-1.4
114,018	-				-0.4
114,034	+				-1.4
114,034	+				-1.2
114,035	-				-1.7
114,035	-				-0.4
114,035	-				-1.6
114,533	+		ABIE53_000107	0.82	+0.6
114,533	+		ABIE53_000107	0.82	+1.1
114,533	+		ABIE53_000107	0.82	-0.7
114,533	+		ABIE53_000107	0.82	-1.4
114,533	+		ABIE53_000107	0.82	+0.7
114,533	+		ABIE53_000107	0.82	-2.6
114,534	-		ABIE53_000107	0.82	-0.0