Experiment: LB 37C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Pf1N1B4_765 and Pf1N1B4_766 are separated by 413 nucleotides Pf1N1B4_766 and Pf1N1B4_767 are separated by 76 nucleotides
Pf1N1B4_765 - Cys-tRNA(Pro) deacylase YbaK, at 869,217 to 869,687
_765
Pf1N1B4_766 - Glycerol uptake facilitator protein, at 870,101 to 870,910
_766
Pf1N1B4_767 - Glycerol kinase (EC 2.7.1.30), at 870,987 to 872,492
_767
Position (kb) 870
871 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 869.183 kb on + strand at 869.184 kb on - strand at 869.184 kb on - strand at 869.184 kb on - strand at 869.184 kb on - strand at 869.184 kb on - strand at 869.184 kb on - strand at 869.355 kb on - strand, within Pf1N1B4_765 at 869.355 kb on - strand, within Pf1N1B4_765 at 869.602 kb on + strand, within Pf1N1B4_765 at 869.602 kb on + strand, within Pf1N1B4_765 at 869.602 kb on + strand, within Pf1N1B4_765 at 869.602 kb on + strand at 869.629 kb on + strand, within Pf1N1B4_765 at 869.629 kb on + strand, within Pf1N1B4_765 at 869.736 kb on - strand at 869.751 kb on - strand at 869.763 kb on + strand at 869.763 kb on + strand at 869.763 kb on + strand at 869.763 kb on + strand at 869.763 kb on + strand at 869.764 kb on - strand at 869.764 kb on - strand at 869.764 kb on - strand at 869.764 kb on - strand at 869.764 kb on - strand at 869.764 kb on - strand at 869.764 kb on - strand at 869.771 kb on + strand at 869.772 kb on - strand at 869.855 kb on + strand at 869.936 kb on + strand at 869.936 kb on + strand at 869.936 kb on + strand at 870.073 kb on - strand at 870.332 kb on + strand, within Pf1N1B4_766 at 870.332 kb on + strand at 870.333 kb on - strand at 871.004 kb on + strand at 871.290 kb on + strand, within Pf1N1B4_767 at 871.291 kb on - strand at 871.291 kb on - strand, within Pf1N1B4_767 at 871.291 kb on - strand, within Pf1N1B4_767 at 871.365 kb on + strand, within Pf1N1B4_767 at 871.365 kb on + strand, within Pf1N1B4_767 at 871.531 kb on + strand at 871.532 kb on - strand, within Pf1N1B4_767 at 871.545 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.773 kb on + strand, within Pf1N1B4_767 at 871.774 kb on - strand, within Pf1N1B4_767 at 871.774 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB 37C remove 869,183 + +0.1 869,184 - -1.6 869,184 - +0.9 869,184 - -1.8 869,184 - -0.6 869,184 - +0.4 869,184 - -0.4 869,355 - Pf1N1B4_765 0.29 +1.3 869,355 - Pf1N1B4_765 0.29 -0.3 869,602 + Pf1N1B4_765 0.82 -2.3 869,602 + Pf1N1B4_765 0.82 -1.6 869,602 + Pf1N1B4_765 0.82 -1.6 869,602 + -0.1 869,629 + Pf1N1B4_765 0.87 +1.3 869,629 + Pf1N1B4_765 0.87 -0.7 869,736 - -1.4 869,751 - -0.7 869,763 + -2.9 869,763 + -0.1 869,763 + +0.3 869,763 + -1.3 869,763 + -0.1 869,764 - -0.4 869,764 - +0.7 869,764 - +1.8 869,764 - -2.5 869,764 - +2.0 869,764 - +0.9 869,764 - -1.9 869,771 + -0.4 869,772 - -1.0 869,855 + +0.1 869,936 + +1.9 869,936 + -2.9 869,936 + +0.1 870,073 - +0.3 870,332 + Pf1N1B4_766 0.29 -1.9 870,332 + -0.1 870,333 - +2.8 871,004 + -0.6 871,290 + Pf1N1B4_767 0.20 -1.9 871,291 - -0.4 871,291 - Pf1N1B4_767 0.20 -2.1 871,291 - Pf1N1B4_767 0.20 +1.6 871,365 + Pf1N1B4_767 0.25 -1.9 871,365 + Pf1N1B4_767 0.25 +0.4 871,531 + +1.9 871,532 - Pf1N1B4_767 0.36 +0.6 871,545 + Pf1N1B4_767 0.37 -2.1 871,773 + Pf1N1B4_767 0.52 +1.6 871,773 + Pf1N1B4_767 0.52 -2.0 871,773 + Pf1N1B4_767 0.52 -1.0 871,773 + Pf1N1B4_767 0.52 +1.0 871,774 - Pf1N1B4_767 0.52 -1.3 871,774 - +0.1
Or see this region's nucleotide sequence