Strain Fitness in Pseudomonas fluorescens FW300-N1B4 around Pf1N1B4_1817

Experiment: LB 37C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB 37C
2,093,763	+		Pf1N1B4_1816	0.30	-1.4
2,093,763	+		Pf1N1B4_1816	0.30	-1.7
2,093,764	-		Pf1N1B4_1816	0.30	+1.9
2,093,764	-		Pf1N1B4_1816	0.30	+1.3
2,093,777	+		Pf1N1B4_1816	0.31	-0.4
2,093,777	+		Pf1N1B4_1816	0.31	+1.8
2,093,777	+		Pf1N1B4_1816	0.31	-0.3
2,093,778	-		Pf1N1B4_1816	0.31	+1.7
2,093,850	+		Pf1N1B4_1816	0.37	-0.7
2,093,850	+		Pf1N1B4_1816	0.37	+0.4
2,093,859	+		Pf1N1B4_1816	0.38	+1.0
2,093,859	+		Pf1N1B4_1816	0.38	-1.4
2,093,860	-		Pf1N1B4_1816	0.38	+0.7
2,093,860	-		Pf1N1B4_1816	0.38	-0.3
2,093,860	-		Pf1N1B4_1816	0.38	+0.2
2,094,139	-		Pf1N1B4_1816	0.61	-1.4
2,094,224	+		Pf1N1B4_1816	0.69	-0.8
2,094,224	+		Pf1N1B4_1816	0.69	-0.3
2,094,224	+		Pf1N1B4_1816	0.69	+0.5
2,094,225	-		Pf1N1B4_1816	0.69	-2.6
2,094,225	-		Pf1N1B4_1816	0.69	+1.3
2,094,225	-		Pf1N1B4_1816	0.69	+0.5
2,094,347	+		Pf1N1B4_1816	0.79	+0.7
2,094,356	+		Pf1N1B4_1816	0.80	-1.1
2,094,356	+		Pf1N1B4_1816	0.80	+1.0
2,094,356	+		Pf1N1B4_1816	0.80	-0.4
2,094,356	+		Pf1N1B4_1816	0.80	+1.4
2,094,357	-		Pf1N1B4_1816	0.80	-0.4
2,094,357	-		Pf1N1B4_1816	0.80	-2.4
2,094,357	-		Pf1N1B4_1816	0.80	+0.9
2,094,357	-		Pf1N1B4_1816	0.80	+2.1
2,094,377	+		Pf1N1B4_1816	0.82	+1.8
2,094,377	+		Pf1N1B4_1816	0.82	+1.4
2,094,378	-		Pf1N1B4_1816	0.82	-1.7
2,094,378	-		Pf1N1B4_1816	0.82	+1.1
2,094,579	+				-1.5
2,094,579	+				-1.7
2,094,579	+				+0.3
2,094,579	+				+1.5
2,094,579	+				-2.0
2,094,580	-				+0.6
2,094,722	+				-0.8
2,094,722	+				+0.4
2,094,722	+				-2.1
2,094,722	+				+0.3
2,094,722	+				+0.5
2,094,722	+				+0.1
2,094,722	+				-1.4
2,094,722	+				+0.2
2,094,722	+				-0.4
2,094,722	+				+1.5
2,094,722	+				+1.5
2,094,722	+				-0.2
2,094,722	+				-0.9
2,094,722	+				-0.2
2,094,722	+				+1.1
2,094,722	+				+0.5
2,094,722	+				-0.3
2,094,722	+				+1.0
2,094,722	+				-0.3
2,094,722	+				+0.6
2,094,722	+				+3.0
2,094,722	+				+1.3
2,094,722	+				-1.0
2,094,722	+				-1.4
2,094,722	+				+1.4
2,094,722	+				+0.4
2,094,722	+				+0.4
2,094,722	+				+0.5
2,094,722	+				-1.2
2,094,722	+				+0.8
2,094,722	+				-0.6
2,094,722	+				+1.5
2,094,723	-				+1.1
2,094,723	-				-1.7
2,094,723	-				+0.8
2,094,723	-				+1.9
2,094,723	-				-1.5
2,094,723	-				-1.0
2,094,723	-				+0.2
2,094,723	-				-1.5
2,094,723	-				-1.1
2,094,723	-				-0.6
2,094,723	-				-1.3
2,094,723	-				+0.1
2,094,723	-				-2.1
2,094,723	-				-3.9
2,094,723	-				+0.9
2,094,723	-				+1.7
2,094,723	-				-0.8
2,094,723	-				+0.9
2,094,723	-				-0.0
2,094,723	-				-1.4
2,094,723	-				+1.0
2,094,723	-				+0.4
2,094,723	-				-1.6
2,094,723	-				-0.3
2,094,723	-				+1.9
2,094,723	-				+1.4
2,094,723	-				+0.2
2,094,723	-				+0.5
2,094,723	-				+0.7
2,094,723	-				+1.5
2,094,723	-				+0.8
2,094,723	-				+1.1
2,094,723	-				-1.5
2,094,723	-				+0.5
2,094,723	-				+0.0
2,094,723	-				+0.4
2,094,723	-				-2.0
2,094,723	-				+0.2
2,094,723	-				-2.0
2,094,723	-				-1.6
2,094,734	-				-2.3
2,094,734	-				+0.7
2,094,750	+				-1.2
2,094,751	-				+1.4
2,094,751	-				+0.1
2,094,821	+				-1.5
2,094,822	-				-0.1
2,094,822	-				+1.0
2,094,822	-				-0.2
2,095,002	-		Pf1N1B4_1817	0.28	-2.1
2,095,188	+		Pf1N1B4_1817	0.48	+0.2
2,095,189	-		Pf1N1B4_1817	0.48	+1.5
2,095,189	-		Pf1N1B4_1817	0.48	+0.5
2,095,189	-		Pf1N1B4_1817	0.48	+0.2
2,095,270	+		Pf1N1B4_1817	0.57	-0.8
2,095,344	+		Pf1N1B4_1817	0.66	+0.7
2,095,344	+		Pf1N1B4_1817	0.66	-1.7
2,095,344	+		Pf1N1B4_1817	0.66	+0.0
2,095,345	-		Pf1N1B4_1817	0.66	-1.2
2,095,417	+		Pf1N1B4_1817	0.74	+1.5
2,095,417	+		Pf1N1B4_1817	0.74	-0.8
2,095,417	+		Pf1N1B4_1817	0.74	-1.2
2,095,417	+		Pf1N1B4_1817	0.74	+0.3
2,095,417	+		Pf1N1B4_1817	0.74	-0.3
2,095,417	+		Pf1N1B4_1817	0.74	-0.3
2,095,417	+		Pf1N1B4_1817	0.74	-1.4
2,095,417	+		Pf1N1B4_1817	0.74	-1.3
2,095,417	+		Pf1N1B4_1817	0.74	+0.6
2,095,417	+		Pf1N1B4_1817	0.74	-1.0
2,095,418	-		Pf1N1B4_1817	0.74	+1.2
2,095,418	-		Pf1N1B4_1817	0.74	+0.7
2,095,418	-		Pf1N1B4_1817	0.74	-0.8
2,095,496	-		Pf1N1B4_1817	0.83	+2.3
2,095,496	-		Pf1N1B4_1817	0.83	+0.6
2,095,496	-		Pf1N1B4_1817	0.83	+0.8
2,095,535	-		Pf1N1B4_1817	0.87	-1.2
2,095,544	+		Pf1N1B4_1817	0.88	+1.4
2,095,551	+		Pf1N1B4_1817	0.89	-1.6
2,095,551	+		Pf1N1B4_1817	0.89	+1.3
2,095,552	-		Pf1N1B4_1817	0.89	-1.6
2,095,552	-		Pf1N1B4_1817	0.89	-0.2
2,095,554	+		Pf1N1B4_1817	0.89	+0.5
2,095,554	+		Pf1N1B4_1817	0.89	-0.1
2,095,554	+		Pf1N1B4_1817	0.89	+0.6
2,095,554	+		Pf1N1B4_1817	0.89	+0.3
2,095,554	+		Pf1N1B4_1817	0.89	-0.1
2,095,554	+		Pf1N1B4_1817	0.89	-1.2
2,095,554	+		Pf1N1B4_1817	0.89	-0.4
2,095,555	-		Pf1N1B4_1817	0.89	+0.0
2,095,555	-		Pf1N1B4_1817	0.89	-0.5
2,095,555	-		Pf1N1B4_1817	0.89	-0.7
2,095,594	+				-0.3
2,095,594	+				+1.3
2,095,594	+				-0.1
2,095,595	-				-1.3
2,095,635	+				+0.1
2,095,635	+				+0.3
2,095,636	-				+0.9
2,095,642	+				-0.3
2,095,642	+				-1.5
2,095,642	+				+1.0
2,095,642	+				+0.4
2,095,642	+				+1.9
2,095,643	-				-0.8
2,095,643	-				-1.5
2,095,643	-				+0.1
2,095,664	+				-0.6
2,095,664	+				-0.8
2,095,664	+				-0.3
2,095,665	-				+1.9
2,095,665	-				+1.7
2,095,665	-				+1.2
2,095,665	-				+1.2
2,095,665	-				+0.2
2,095,668	-				-1.8
2,095,706	+				-2.5
2,095,706	+				+1.9
2,095,706	+				+0.3
2,095,706	+				-1.3
2,095,706	+				+0.4
2,095,706	+				+0.8
2,095,706	+				+2.1
2,095,707	-				-0.5
2,095,708	+				+0.4
2,095,708	+				+1.0
2,095,708	+				-0.2
2,095,708	+				+1.0
2,095,708	+				+0.9
2,095,708	+				-0.3
2,095,708	+				+0.0
2,095,708	+				-1.3
2,095,708	+				-0.4
2,095,708	+				+0.8
2,095,709	-				+1.1
2,095,709	-				+1.1
2,095,709	-				+1.7
2,095,709	-				-0.4
2,095,709	-				+1.7
2,095,709	-				+0.7
2,095,709	-				-1.0
2,095,709	-				+1.2
2,095,709	-				-2.6
2,095,709	-				-1.8
2,095,712	+				+0.2
2,095,712	+				+0.9
2,095,712	+				-1.2
2,095,712	+				-0.1
2,095,713	-				-0.3
2,095,713	-				+1.0
2,095,713	-				-0.8
2,095,713	-				-0.7
2,095,713	-				-1.0
2,095,713	-				+0.5
2,095,713	-				+0.6
2,095,746	+				-0.1
2,095,746	+				+0.6
2,095,746	+				+1.4
2,095,747	-				+1.0
2,095,747	-				-0.1
2,095,747	-				-2.0
2,095,747	-				+1.6
2,095,760	+				+0.8
2,095,760	+				-0.5
2,095,760	+				-1.0
2,095,761	-				-0.6
2,095,761	-				-0.0
2,095,761	-				-1.7
2,095,761	-				+0.8
2,095,761	-				+0.0
2,095,774	+				+2.2
2,095,774	+				+1.9
2,095,774	+				+0.1
2,095,774	+				+1.3
2,095,774	+				+0.0
2,095,775	-				+1.5
2,095,775	-				+0.5
2,095,775	-				-0.2
2,095,775	-				+0.9
2,095,775	-				+0.5
2,095,832	+				+0.7
2,095,833	-				+1.6
2,095,923	+				-3.1
2,095,924	-				+0.6
2,095,924	-				+0.6
2,095,947	+				+0.0
2,096,002	+				+1.4
2,096,057	+				+1.7
2,096,057	+				-0.3
2,096,058	-				-1.6
2,096,064	+				+0.1
2,096,064	+				-2.8
2,096,065	-				-1.0
2,096,065	-				+0.5
2,096,179	+				+1.9
2,096,179	+				-1.1
2,096,179	+				+1.3
2,096,180	-				-0.9
2,096,234	+		Pf1N1B4_1818	0.13	+0.0
2,096,234	+		Pf1N1B4_1818	0.13	+0.2
2,096,234	+		Pf1N1B4_1818	0.13	+0.8
2,096,234	+		Pf1N1B4_1818	0.13	+2.0
2,096,235	-		Pf1N1B4_1818	0.13	-1.3
2,096,335	-		Pf1N1B4_1818	0.22	+2.0
2,096,499	-				+1.3
2,096,499	-				-0.3
2,096,501	-		Pf1N1B4_1818	0.37	+2.1
2,096,525	+		Pf1N1B4_1818	0.39	+0.6
2,096,525	+		Pf1N1B4_1818	0.39	-1.9
2,096,525	+		Pf1N1B4_1818	0.39	+2.2
2,096,526	-		Pf1N1B4_1818	0.39	-1.1
2,096,528	+		Pf1N1B4_1818	0.39	+1.9