Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29215

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
6,493,235	-				+4.2
6,493,235	-				+2.0
6,493,235	-				+0.6
6,493,235	-				-0.0
6,493,235	-				-0.8
6,493,235	-				+1.1
6,493,235	-				+4.6
6,493,235	-				+0.3
6,493,239	-				+1.7
6,493,239	-				-0.2
6,493,239	-				+1.5
6,493,248	-				+1.6
6,493,248	-				+4.0
6,493,248	-				+2.8
6,493,248	-				-1.4
6,493,248	-				+3.6
6,493,250	+				-2.0
6,493,250	+				+1.4
6,493,250	+				+0.9
6,493,250	+				+0.0
6,493,251	-				+0.8
6,493,251	-				-1.0
6,493,251	-				-0.3
6,493,251	-				+0.1
6,493,251	-				-0.3
6,493,251	-				+1.3
6,493,266	+				-0.4
6,493,266	+				+0.0
6,493,266	+				+0.3
6,493,266	+				-0.7
6,493,266	+				-2.0
6,493,266	+				+3.9
6,493,266	+				+2.3
6,493,266	+				+0.4
6,493,266	+				-1.6
6,493,266	+				-1.8
6,493,266	+				+1.4
6,493,266	+				-0.1
6,493,267	-				+0.3
6,493,267	-				-0.6
6,493,267	-				-0.4
6,493,267	-				-0.5
6,493,267	-				-0.4
6,493,267	-				-0.2
6,493,267	-				-1.9
6,493,281	-				+0.1
6,493,353	+				-1.8
6,493,421	-				-2.0
6,493,459	+		PFLU_RS29215	0.14	-1.5
6,493,459	+		PFLU_RS29215	0.14	-0.9
6,493,459	+		PFLU_RS29215	0.14	-1.5
6,493,459	+		PFLU_RS29215	0.14	-0.7
6,493,460	-		PFLU_RS29215	0.14	-2.0
6,493,460	-		PFLU_RS29215	0.14	-1.7
6,493,460	-		PFLU_RS29215	0.14	-1.7
6,493,510	+		PFLU_RS29215	0.21	-2.1
6,493,511	-		PFLU_RS29215	0.21	-2.5
6,493,599	+		PFLU_RS29215	0.33	+0.6
6,493,599	+		PFLU_RS29215	0.33	-1.2
6,493,599	+		PFLU_RS29215	0.33	+0.6
6,493,599	+		PFLU_RS29215	0.33	-2.5
6,493,599	+		PFLU_RS29215	0.33	-2.7
6,493,599	+		PFLU_RS29215	0.33	-1.9
6,493,599	+		PFLU_RS29215	0.33	-0.9
6,493,599	+		PFLU_RS29215	0.33	-2.9
6,493,599	+		PFLU_RS29215	0.33	+0.0
6,493,599	+		PFLU_RS29215	0.33	-1.7
6,493,599	+		PFLU_RS29215	0.33	-1.0
6,493,599	+		PFLU_RS29215	0.33	-2.1
6,493,599	+		PFLU_RS29215	0.33	-2.5
6,493,599	+		PFLU_RS29215	0.33	-2.4
6,493,600	-		PFLU_RS29215	0.33	-1.5
6,493,600	-		PFLU_RS29215	0.33	-1.7
6,493,600	-		PFLU_RS29215	0.33	-1.7
6,493,600	-		PFLU_RS29215	0.33	-2.7
6,493,600	-		PFLU_RS29215	0.33	-0.3
6,493,600	-		PFLU_RS29215	0.33	-2.2
6,493,600	-		PFLU_RS29215	0.33	-1.0
6,493,600	-		PFLU_RS29215	0.33	-0.7
6,493,600	-		PFLU_RS29215	0.33	-0.9
6,493,600	-		PFLU_RS29215	0.33	-1.6
6,493,600	-		PFLU_RS29215	0.33	-1.4
6,493,600	-		PFLU_RS29215	0.33	-1.5
6,493,600	-		PFLU_RS29215	0.33	-2.2
6,493,600	-		PFLU_RS29215	0.33	+0.0
6,493,600	-		PFLU_RS29215	0.33	-1.2
6,493,600	-		PFLU_RS29215	0.33	-1.1
6,493,600	-		PFLU_RS29215	0.33	-1.1
6,493,600	-		PFLU_RS29215	0.33	-3.4
6,493,600	-		PFLU_RS29215	0.33	+1.0
6,493,600	-		PFLU_RS29215	0.33	-1.2
6,493,616	-		PFLU_RS29215	0.35	-2.2
6,493,620	+		PFLU_RS29215	0.36	+0.6
6,493,620	+		PFLU_RS29215	0.36	-1.6
6,493,621	-		PFLU_RS29215	0.36	-2.7
6,493,621	-		PFLU_RS29215	0.36	-1.9
6,493,652	-		PFLU_RS29215	0.40	-2.2
6,493,675	+		PFLU_RS29215	0.43	-1.8
6,493,676	-		PFLU_RS29215	0.43	-1.9
6,493,676	-		PFLU_RS29215	0.43	+1.0
6,493,759	+		PFLU_RS29215	0.54	+0.8
6,493,759	+		PFLU_RS29215	0.54	-2.5
6,493,760	-		PFLU_RS29215	0.55	-2.5
6,493,760	-		PFLU_RS29215	0.55	-1.8
6,493,760	-		PFLU_RS29215	0.55	-1.1
6,493,930	+		PFLU_RS29215	0.77	-0.7
6,494,012	+		PFLU_RS29215	0.88	-0.7
6,494,012	+		PFLU_RS29215	0.88	-0.6
6,494,012	+		PFLU_RS29215	0.88	-2.0
6,494,012	+		PFLU_RS29215	0.88	-1.6
6,494,012	+		PFLU_RS29215	0.88	-0.6
6,494,012	+		PFLU_RS29215	0.88	-1.7
6,494,012	+		PFLU_RS29215	0.88	-1.7
6,494,013	-		PFLU_RS29215	0.88	-2.7
6,494,013	-		PFLU_RS29215	0.88	-2.3
6,494,013	-		PFLU_RS29215	0.88	-3.0
6,494,015	+		PFLU_RS29215	0.89	-0.2
6,494,015	+		PFLU_RS29215	0.89	-1.0
6,494,016	-		PFLU_RS29215	0.89	-0.7
6,494,016	-		PFLU_RS29215	0.89	-0.8
6,494,016	-		PFLU_RS29215	0.89	-2.8
6,494,022	+		PFLU_RS29215	0.90	-2.2
6,494,022	+		PFLU_RS29215	0.90	-1.8
6,494,022	+		PFLU_RS29215	0.90	-0.7
6,494,023	-		PFLU_RS29215	0.90	-0.9
6,494,023	-		PFLU_RS29215	0.90	-0.7
6,494,098	+				-1.3
6,494,098	+				-1.2
6,494,098	+				-1.4
6,494,098	+				-1.4
6,494,098	+				+1.3
6,494,098	+				-2.1
6,494,099	-				-0.7
6,494,099	-				-1.2
6,494,099	-				-1.9
6,494,099	-				-0.2
6,494,099	-				-3.0
6,494,099	-				-2.7
6,494,099	-				-1.7
6,494,099	-				-1.0
6,494,135	+				-2.1
6,494,140	+				-1.4
6,494,140	+				-1.1
6,494,140	+				+0.5
6,494,140	+				-0.6
6,494,140	+				+0.6
6,494,140	+				-1.1
6,494,141	-				-1.0
6,494,141	-				-0.9
6,494,141	-				+1.0
6,494,141	-				+1.5
6,494,178	+				+0.0
6,494,178	+				-0.2
6,494,179	-				-1.9
6,494,179	-				-1.3
6,494,179	-				-0.2
6,494,223	+				+1.1
6,494,223	+				-0.8
6,494,224	-				-0.4
6,494,224	-				-2.3
6,494,224	-				-2.0
6,494,224	-				-2.7
6,494,224	-				-0.6
6,494,224	-				-2.3
6,494,227	+				+1.2
6,494,280	-				-1.5
6,494,280	-				-1.9
6,494,292	+				+0.5
6,494,292	+				-1.1
6,494,292	+				-1.7
6,494,292	+				+1.0
6,494,293	-				+2.1
6,494,293	-				+0.6
6,494,293	-				-0.8
6,494,323	+				-0.5
6,494,370	+				-0.1
6,494,370	+				+1.3
6,494,370	+				-0.4
6,494,370	+				+0.3
6,494,370	+				+0.3
6,494,370	+				-0.2
6,494,370	+				-0.5
6,494,370	+				-0.9
6,494,371	-				-2.0
6,494,371	-				-1.2
6,494,371	-				+1.6
6,494,371	-				-1.7
6,494,371	-				-1.1
6,494,384	+				+0.5
6,494,384	+				+2.9
6,494,384	+				-0.9
6,494,384	+				-2.0
6,494,385	-				+0.0
6,494,421	+				-1.0
6,494,422	-				-1.2
6,494,422	-				-1.2
6,494,432	+				-2.3
6,494,432	+				-1.1
6,494,432	+				+0.4
6,494,432	+				-0.9
6,494,433	-				-1.3
6,494,433	-				-1.7
6,494,433	-				-1.0
6,494,433	-				-1.1
6,494,481	+				+0.3
6,494,481	+				-2.4
6,494,481	+				+0.6
6,494,481	+				-1.3
6,494,481	+				+1.6
6,494,482	-				-0.9
6,494,482	-				-0.6
6,494,482	-				-2.0
6,494,482	-				+0.3
6,494,482	-				-2.2
6,494,482	-				+0.0
6,494,482	-				-1.7
6,494,500	+				-0.4
6,494,500	+				+0.4
6,494,500	+				-0.2
6,494,501	-				-0.2
6,494,546	+				-1.6
6,494,546	+				+1.5
6,494,546	+				-0.3
6,494,546	+				-0.4
6,494,546	+				-0.3
6,494,546	+				+0.6
6,494,546	+				-0.2
6,494,546	+				-1.0
6,494,547	-				-1.1
6,494,547	-				-1.6
6,494,547	-				+1.6
6,494,547	-				-1.7
6,494,547	-				-2.9
6,494,547	-				-1.5
6,494,576	+				-1.0
6,494,576	+				+0.3
6,494,576	+				+0.6
6,494,576	+				-0.4
6,494,576	+				+1.5
6,494,576	+				+1.2
6,494,576	+				+0.5
6,494,576	+				+1.2
6,494,576	+				+2.0
6,494,576	+				+2.7
6,494,576	+				-1.5
6,494,576	+				+0.1
6,494,576	+				-2.7
6,494,576	+				-1.0
6,494,578	+				+0.7
6,494,578	+				+2.8
6,494,578	+				+1.8
6,494,578	+				-0.1
6,494,578	+				+0.6
6,494,578	+				+0.7
6,494,578	+				-1.0
6,494,578	+				+3.1
6,494,578	+				-1.1
6,494,578	+				+0.2
6,494,578	+				-0.5
6,494,578	+				-1.6
6,494,578	+				+1.3
6,494,578	+				+0.4
6,494,578	+				-0.6
6,494,578	+				+0.8
6,494,578	+				+0.5
6,494,578	+				-2.3
6,494,578	+				+2.4
6,494,578	+				-1.3
6,494,578	+				-0.2
6,494,578	+				+1.5
6,494,578	+				-1.2
6,494,578	+				+2.0