Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29150

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
6,480,849	+		PFLU_RS29140	0.82	-1.1
6,480,849	+		PFLU_RS29140	0.82	-0.3
6,480,849	+		PFLU_RS29140	0.82	-1.0
6,480,849	+		PFLU_RS29140	0.82	-0.4
6,480,849	+		PFLU_RS29140	0.82	-1.7
6,480,849	+		PFLU_RS29140	0.82	-0.2
6,480,849	+		PFLU_RS29140	0.82	+0.1
6,480,849	+		PFLU_RS29140	0.82	-1.6
6,480,850	-		PFLU_RS29140	0.82	-0.4
6,480,850	-		PFLU_RS29140	0.82	-0.8
6,480,850	-		PFLU_RS29140	0.82	+2.4
6,480,850	-		PFLU_RS29140	0.82	+0.9
6,480,850	-		PFLU_RS29140	0.82	-0.5
6,480,865	-		PFLU_RS29140	0.85	+0.8
6,480,865	-		PFLU_RS29140	0.85	-0.0
6,480,865	-		PFLU_RS29140	0.85	+0.6
6,480,952	-				+1.1
6,480,952	-				+1.7
6,480,952	-				-1.9
6,480,955	+				+2.5
6,480,955	+				+0.5
6,480,955	+				-1.1
6,480,955	+				-0.9
6,480,955	+				+0.6
6,480,955	+				-1.3
6,480,955	+				+1.0
6,480,955	+				-0.2
6,480,955	+				+0.6
6,480,955	+				+1.7
6,480,955	+				+0.0
6,480,955	+				+0.0
6,480,955	+				+0.2
6,480,955	+				+1.0
6,480,956	-				-1.1
6,480,956	-				+0.6
6,480,956	-				-0.4
6,480,956	-				-1.6
6,480,956	-				+0.1
6,480,956	-				+1.4
6,480,956	-				-2.0
6,480,956	-				-0.4
6,480,956	-				-0.2
6,480,956	-				+3.8
6,480,956	-				-1.0
6,480,956	-				-0.1
6,480,956	-				+0.3
6,480,956	-				-1.7
6,480,956	-				-1.7
6,481,041	+		PFLU_RS29145	0.11	-2.2
6,481,042	-		PFLU_RS29145	0.11	+1.1
6,481,062	+		PFLU_RS29145	0.14	-1.9
6,481,062	+		PFLU_RS29145	0.14	+0.3
6,481,062	+		PFLU_RS29145	0.14	+0.0
6,481,062	+		PFLU_RS29145	0.14	+0.9
6,481,062	+		PFLU_RS29145	0.14	+0.6
6,481,062	+		PFLU_RS29145	0.14	-0.8
6,481,062	+		PFLU_RS29145	0.14	-1.1
6,481,062	+		PFLU_RS29145	0.14	-1.4
6,481,062	+		PFLU_RS29145	0.14	+2.6
6,481,062	+		PFLU_RS29145	0.14	+2.0
6,481,062	+		PFLU_RS29145	0.14	-1.9
6,481,062	+		PFLU_RS29145	0.14	+1.0
6,481,062	+		PFLU_RS29145	0.14	+3.0
6,481,062	+		PFLU_RS29145	0.14	-1.1
6,481,062	+		PFLU_RS29145	0.14	-2.1
6,481,062	+		PFLU_RS29145	0.14	-2.5
6,481,062	+		PFLU_RS29145	0.14	+0.1
6,481,062	+		PFLU_RS29145	0.14	-2.0
6,481,063	-		PFLU_RS29145	0.14	+1.0
6,481,063	-		PFLU_RS29145	0.14	+1.3
6,481,063	-		PFLU_RS29145	0.14	-0.5
6,481,063	-		PFLU_RS29145	0.14	+0.4
6,481,063	-		PFLU_RS29145	0.14	-0.2
6,481,063	-		PFLU_RS29145	0.14	+0.8
6,481,063	-		PFLU_RS29145	0.14	+0.3
6,481,063	-		PFLU_RS29145	0.14	+1.0
6,481,063	-		PFLU_RS29145	0.14	-0.6
6,481,063	-		PFLU_RS29145	0.14	+0.3
6,481,063	-		PFLU_RS29145	0.14	+1.0
6,481,063	-		PFLU_RS29145	0.14	-0.5
6,481,063	-		PFLU_RS29145	0.14	-0.6
6,481,063	-		PFLU_RS29145	0.14	-1.3
6,481,063	-		PFLU_RS29145	0.14	+1.3
6,481,107	+		PFLU_RS29145	0.20	+0.3
6,481,107	+		PFLU_RS29145	0.20	-0.3
6,481,108	-		PFLU_RS29145	0.20	+1.6
6,481,108	-		PFLU_RS29145	0.20	+0.6
6,481,131	+		PFLU_RS29145	0.23	+0.1
6,481,131	+		PFLU_RS29145	0.23	-0.2
6,481,131	+		PFLU_RS29145	0.23	-1.4
6,481,131	+		PFLU_RS29145	0.23	-0.1
6,481,131	+		PFLU_RS29145	0.23	-1.5
6,481,131	+		PFLU_RS29145	0.23	-1.1
6,481,132	-		PFLU_RS29145	0.24	-0.1
6,481,132	-		PFLU_RS29145	0.24	-2.8
6,481,132	-		PFLU_RS29145	0.24	-0.4
6,481,132	-		PFLU_RS29145	0.24	-1.5
6,481,132	-		PFLU_RS29145	0.24	+1.2
6,481,132	-		PFLU_RS29145	0.24	+2.4
6,481,140	+		PFLU_RS29145	0.25	+0.2
6,481,140	+		PFLU_RS29145	0.25	+0.4
6,481,140	+		PFLU_RS29145	0.25	-0.9
6,481,141	-		PFLU_RS29145	0.25	+0.5
6,481,152	-		PFLU_RS29145	0.26	+1.5
6,481,158	+		PFLU_RS29145	0.27	+1.0
6,481,158	+		PFLU_RS29145	0.27	+1.4
6,481,158	+		PFLU_RS29145	0.27	-0.1
6,481,158	+		PFLU_RS29145	0.27	+1.1
6,481,158	+		PFLU_RS29145	0.27	+1.0
6,481,159	-		PFLU_RS29145	0.27	-0.9
6,481,159	-		PFLU_RS29145	0.27	+4.0
6,481,159	-		PFLU_RS29145	0.27	+1.5
6,481,159	-		PFLU_RS29145	0.27	+0.6
6,481,182	-		PFLU_RS29145	0.30	-1.7
6,481,251	+		PFLU_RS29145	0.40	-0.4
6,481,251	+		PFLU_RS29145	0.40	+0.0
6,481,252	-		PFLU_RS29145	0.40	-1.3
6,481,252	-		PFLU_RS29145	0.40	-1.1
6,481,252	-		PFLU_RS29145	0.40	+0.2
6,481,278	+		PFLU_RS29145	0.43	-0.7
6,481,278	+		PFLU_RS29145	0.43	+0.4
6,481,279	-		PFLU_RS29145	0.43	+1.1
6,481,279	-		PFLU_RS29145	0.43	-0.2
6,481,279	-		PFLU_RS29145	0.43	-1.2
6,481,326	+		PFLU_RS29145	0.50	+1.6
6,481,326	+		PFLU_RS29145	0.50	+0.4
6,481,326	+		PFLU_RS29145	0.50	+0.6
6,481,326	+		PFLU_RS29145	0.50	-1.0
6,481,326	+		PFLU_RS29145	0.50	+1.6
6,481,326	+		PFLU_RS29145	0.50	+1.4
6,481,327	-		PFLU_RS29145	0.50	+0.1
6,481,327	-		PFLU_RS29145	0.50	-0.7
6,481,327	-		PFLU_RS29145	0.50	+0.3
6,481,327	-		PFLU_RS29145	0.50	-0.9
6,481,327	-		PFLU_RS29145	0.50	+0.5
6,481,327	-		PFLU_RS29145	0.50	+2.4
6,481,327	-		PFLU_RS29145	0.50	-0.3
6,481,327	-		PFLU_RS29145	0.50	+0.1
6,481,398	+		PFLU_RS29145	0.60	+1.5
6,481,399	-		PFLU_RS29145	0.60	-0.2
6,481,399	-		PFLU_RS29145	0.60	+1.9
6,481,399	-		PFLU_RS29145	0.60	+0.6
6,481,399	-		PFLU_RS29145	0.60	-0.1
6,481,448	+		PFLU_RS29145	0.66	+0.8
6,481,449	-		PFLU_RS29145	0.66	-1.1
6,481,449	-		PFLU_RS29145	0.66	-0.4
6,481,458	+		PFLU_RS29145	0.68	+0.7
6,481,458	+		PFLU_RS29145	0.68	-2.5
6,481,458	+		PFLU_RS29145	0.68	-1.4
6,481,458	+		PFLU_RS29145	0.68	+0.7
6,481,458	+		PFLU_RS29145	0.68	-0.8
6,481,458	+		PFLU_RS29145	0.68	-2.2
6,481,458	+		PFLU_RS29145	0.68	+0.0
6,481,458	+		PFLU_RS29145	0.68	-0.4
6,481,458	+		PFLU_RS29145	0.68	+2.7
6,481,458	+		PFLU_RS29145	0.68	+1.1
6,481,459	-		PFLU_RS29145	0.68	-0.1
6,481,459	-		PFLU_RS29145	0.68	-2.4
6,481,459	-		PFLU_RS29145	0.68	-1.8
6,481,528	+		PFLU_RS29145	0.77	-0.1
6,481,528	+		PFLU_RS29145	0.77	+1.4
6,481,528	+		PFLU_RS29145	0.77	-0.4
6,481,528	+		PFLU_RS29145	0.77	-0.3
6,481,528	+		PFLU_RS29145	0.77	+2.7
6,481,528	+		PFLU_RS29145	0.77	+3.3
6,481,528	+		PFLU_RS29145	0.77	+1.6
6,481,528	+		PFLU_RS29145	0.77	-0.6
6,481,528	+		PFLU_RS29145	0.77	+1.9
6,481,529	-		PFLU_RS29145	0.77	+0.4
6,481,529	-		PFLU_RS29145	0.77	-0.7
6,481,529	-		PFLU_RS29145	0.77	-0.2
6,481,529	-		PFLU_RS29145	0.77	-2.4
6,481,529	-		PFLU_RS29145	0.77	+1.0
6,481,529	-		PFLU_RS29145	0.77	+1.4
6,481,529	-		PFLU_RS29145	0.77	+1.5
6,481,529	-		PFLU_RS29145	0.77	+1.5
6,481,529	-		PFLU_RS29145	0.77	-1.1
6,481,529	-		PFLU_RS29145	0.77	+0.7
6,481,529	-		PFLU_RS29145	0.77	+0.3
6,481,529	-		PFLU_RS29145	0.77	+0.3
6,481,658	+				-1.1
6,481,658	+				-1.2
6,481,658	+				+1.3
6,481,659	-				-0.7
6,481,701	+				+1.9
6,481,767	+				-0.2
6,481,767	+				+1.8
6,481,767	+				+0.0
6,481,774	+				+1.0
6,481,774	+				-1.5
6,481,774	+				+0.2
6,481,774	+				-0.4
6,481,774	+				+1.0
6,481,774	+				-2.3
6,481,774	+				+1.5
6,481,775	-				-0.6
6,481,775	-				-1.1
6,481,775	-				+1.8
6,481,775	-				-1.3
6,481,840	+				+0.9
6,481,841	-				+0.4
6,481,841	-				+2.0
6,481,841	-				+0.1
6,481,913	+		PFLU_RS29150	0.12	-1.9
6,481,913	+		PFLU_RS29150	0.12	-0.2
6,481,913	+		PFLU_RS29150	0.12	+2.4
6,481,914	-		PFLU_RS29150	0.12	-2.7
6,481,914	-		PFLU_RS29150	0.12	-1.5
6,481,914	-		PFLU_RS29150	0.12	-2.3
6,481,914	-		PFLU_RS29150	0.12	-1.5
6,481,929	-		PFLU_RS29150	0.14	+3.5
6,481,929	-		PFLU_RS29150	0.14	-1.1
6,481,929	-		PFLU_RS29150	0.14	-1.2
6,481,929	-		PFLU_RS29150	0.14	+1.6
6,481,934	+		PFLU_RS29150	0.15	+0.4
6,481,934	+		PFLU_RS29150	0.15	+1.0
6,481,934	+		PFLU_RS29150	0.15	+1.9
6,481,935	-		PFLU_RS29150	0.15	-1.1
6,481,970	+		PFLU_RS29150	0.21	-2.6
6,481,971	-		PFLU_RS29150	0.21	-0.5
6,481,972	+		PFLU_RS29150	0.21	+0.2
6,481,972	+		PFLU_RS29150	0.21	+0.9
6,481,972	+		PFLU_RS29150	0.21	+1.9
6,481,972	+		PFLU_RS29150	0.21	+0.0
6,481,972	+		PFLU_RS29150	0.21	+0.9
6,481,973	-		PFLU_RS29150	0.21	-0.4
6,481,973	-		PFLU_RS29150	0.21	-0.2
6,482,026	+		PFLU_RS29150	0.30	+1.3
6,482,026	+		PFLU_RS29150	0.30	-1.8
6,482,027	-		PFLU_RS29150	0.30	-2.7
6,482,027	-		PFLU_RS29150	0.30	-1.8
6,482,027	-		PFLU_RS29150	0.30	+0.2
6,482,218	+		PFLU_RS29150	0.60	-1.1
6,482,218	+		PFLU_RS29150	0.60	+0.5
6,482,218	+		PFLU_RS29150	0.60	-1.4
6,482,218	+		PFLU_RS29150	0.60	+4.0
6,482,219	-		PFLU_RS29150	0.60	-0.2
6,482,227	+		PFLU_RS29150	0.61	-0.5
6,482,227	+		PFLU_RS29150	0.61	-0.1
6,482,227	+		PFLU_RS29150	0.61	-1.5
6,482,227	+		PFLU_RS29150	0.61	+0.7
6,482,227	+		PFLU_RS29150	0.61	+0.4
6,482,227	+		PFLU_RS29150	0.61	-0.7
6,482,227	+		PFLU_RS29150	0.61	-0.7
6,482,227	+		PFLU_RS29150	0.61	-1.0
6,482,228	-		PFLU_RS29150	0.61	-2.5
6,482,228	-		PFLU_RS29150	0.61	+0.2
6,482,228	-		PFLU_RS29150	0.61	-2.3
6,482,254	+		PFLU_RS29150	0.66	-1.6
6,482,254	+		PFLU_RS29150	0.66	+0.2
6,482,254	+		PFLU_RS29150	0.66	-1.3
6,482,254	+		PFLU_RS29150	0.66	+2.2
6,482,254	+		PFLU_RS29150	0.66	-1.0
6,482,254	+		PFLU_RS29150	0.66	-0.8
6,482,254	+		PFLU_RS29150	0.66	-1.1
6,482,254	+		PFLU_RS29150	0.66	-0.4
6,482,254	+		PFLU_RS29150	0.66	+0.6
6,482,254	+		PFLU_RS29150	0.66	-1.1
6,482,254	+		PFLU_RS29150	0.66	-0.6
6,482,254	+		PFLU_RS29150	0.66	-2.0
6,482,254	+		PFLU_RS29150	0.66	-1.2
6,482,254	+		PFLU_RS29150	0.66	+1.6
6,482,254	+		PFLU_RS29150	0.66	+1.9
6,482,254	+		PFLU_RS29150	0.66	-0.9
6,482,254	+		PFLU_RS29150	0.66	-1.3
6,482,254	+		PFLU_RS29150	0.66	+0.6
6,482,254	+		PFLU_RS29150	0.66	-0.3
6,482,254	+		PFLU_RS29150	0.66	-0.9
6,482,254	+		PFLU_RS29150	0.66	+1.3
6,482,254	+		PFLU_RS29150	0.66	-2.5
6,482,254	+		PFLU_RS29150	0.66	-1.6
6,482,254	+		PFLU_RS29150	0.66	+1.6
6,482,254	+		PFLU_RS29150	0.66	-1.6
6,482,254	+		PFLU_RS29150	0.66	-0.7
6,482,254	+		PFLU_RS29150	0.66	-0.4
6,482,254	+		PFLU_RS29150	0.66	-1.0
6,482,255	-		PFLU_RS29150	0.66	-1.6
6,482,255	-		PFLU_RS29150	0.66	-2.2
6,482,255	-		PFLU_RS29150	0.66	+1.0
6,482,255	-		PFLU_RS29150	0.66	-0.2
6,482,255	-		PFLU_RS29150	0.66	+0.0
6,482,255	-		PFLU_RS29150	0.66	-0.9
6,482,255	-		PFLU_RS29150	0.66	+1.0
6,482,255	-		PFLU_RS29150	0.66	-0.9
6,482,255	-		PFLU_RS29150	0.66	-1.2
6,482,255	-		PFLU_RS29150	0.66	-0.7
6,482,255	-		PFLU_RS29150	0.66	+1.4
6,482,255	-		PFLU_RS29150	0.66	-0.2
6,482,255	-		PFLU_RS29150	0.66	+0.0
6,482,255	-		PFLU_RS29150	0.66	+0.3
6,482,255	-		PFLU_RS29150	0.66	-1.4
6,482,255	-		PFLU_RS29150	0.66	-0.8
6,482,255	-		PFLU_RS29150	0.66	+0.3
6,482,255	-		PFLU_RS29150	0.66	+1.1
6,482,255	-		PFLU_RS29150	0.66	-1.7
6,482,255	-		PFLU_RS29150	0.66	-1.4
6,482,255	-		PFLU_RS29150	0.66	-0.4
6,482,255	-		PFLU_RS29150	0.66	+1.3
6,482,255	-		PFLU_RS29150	0.66	+1.4
6,482,255	-		PFLU_RS29150	0.66	+0.3
6,482,255	-		PFLU_RS29150	0.66	-0.7
6,482,255	-		PFLU_RS29150	0.66	-0.6
6,482,354	-		PFLU_RS29150	0.81	-0.5
6,482,372	-		PFLU_RS29150	0.84	+0.1
6,482,372	-		PFLU_RS29150	0.84	+0.3
6,482,460	-				-0.5
6,482,460	-				-1.4
6,482,460	-				-1.2
6,482,460	-				-2.3
6,482,472	+				+0.4
6,482,472	+				-0.4
6,482,472	+				+2.6
6,482,472	+				-2.0
6,482,472	+				+0.3
6,482,472	+				-2.6
6,482,472	+				-2.1
6,482,473	-				-2.2
6,482,473	-				+1.0
6,482,473	-				-1.4
6,482,473	-				+0.2
6,482,473	-				+1.0
6,482,473	-				+1.3
6,482,473	-				-0.8
6,482,506	+				-2.1
6,482,506	+				+4.6
6,482,507	-				-1.3
6,482,511	+				+1.6
6,482,511	+				-1.9
6,482,511	+				+1.3
6,482,512	-				-0.9
6,482,512	-				+0.5
6,482,512	-				-0.9
6,482,512	-				+1.7
6,482,512	-				-0.4
6,482,536	-				+0.5
6,482,536	-				-0.6
6,482,537	+				+1.6
6,482,537	+				+0.5
6,482,537	+				+1.6
6,482,538	-				-1.2
6,482,538	-				-3.2
6,482,538	-				-1.8
6,482,538	-				-1.9
6,482,538	-				+1.8
6,482,538	-				-0.4
6,482,559	+				+0.1
6,482,584	+				+1.7
6,482,584	+				-0.5
6,482,584	+				+1.8
6,482,584	+				+1.0
6,482,585	-				+1.6
6,482,585	-				+0.0
6,482,585	-				+1.1
6,482,585	-				+2.4
6,482,666	+		PFLU_RS29155	0.19	-0.5
6,482,667	-		PFLU_RS29155	0.19	+1.2
6,482,685	+		PFLU_RS29155	0.22	+0.5
6,482,685	+		PFLU_RS29155	0.22	+0.5
6,482,685	+		PFLU_RS29155	0.22	-1.9
6,482,685	+		PFLU_RS29155	0.22	-1.3
6,482,685	+		PFLU_RS29155	0.22	+0.5
6,482,685	+		PFLU_RS29155	0.22	-2.2
6,482,685	+		PFLU_RS29155	0.22	+1.0
6,482,685	+		PFLU_RS29155	0.22	+1.2
6,482,685	+		PFLU_RS29155	0.22	-0.2
6,482,686	-		PFLU_RS29155	0.22	+5.1
6,482,686	-		PFLU_RS29155	0.22	+1.6
6,482,686	-		PFLU_RS29155	0.22	-0.6
6,482,686	-		PFLU_RS29155	0.22	-0.1
6,483,261	+				-2.2
6,483,275	+				+2.4
6,483,275	+				+1.9