Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS23095

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
5,186,036	-		PFLU_RS23085	0.71	+1.1
5,186,036	-		PFLU_RS23085	0.71	-1.2
5,186,036	-		PFLU_RS23085	0.71	-2.4
5,186,036	-		PFLU_RS23085	0.71	-2.6
5,186,097	+		PFLU_RS23085	0.78	+1.2
5,186,097	+		PFLU_RS23085	0.78	-0.3
5,186,097	+		PFLU_RS23085	0.78	-0.2
5,186,098	-		PFLU_RS23085	0.78	-0.6
5,186,098	-		PFLU_RS23085	0.78	+2.2
5,186,098	-		PFLU_RS23085	0.78	-1.0
5,186,098	-		PFLU_RS23085	0.78	+0.2
5,186,098	-		PFLU_RS23085	0.78	+0.6
5,186,098	-		PFLU_RS23085	0.78	-2.7
5,186,098	-		PFLU_RS23085	0.78	+1.0
5,186,340	+				+0.9
5,186,340	+				-1.7
5,186,340	+				-0.8
5,186,340	+				+1.8
5,186,341	-				+0.4
5,186,341	-				+0.7
5,186,341	-				-0.6
5,186,341	-				+0.1
5,186,341	-				-2.1
5,186,403	+				+0.5
5,186,403	+				+0.2
5,186,403	+				+0.0
5,186,403	+				-1.0
5,186,404	-				-0.0
5,186,404	-				+0.9
5,186,404	-				+1.0
5,186,404	-				+2.2
5,186,404	-				+0.3
5,186,404	-				-2.4
5,186,404	-				-1.8
5,186,404	-				+1.4
5,186,404	-				+0.4
5,186,436	+		PFLU_RS23090	0.15	+1.0
5,186,436	+		PFLU_RS23090	0.15	-0.8
5,186,436	+		PFLU_RS23090	0.15	-0.8
5,186,436	+		PFLU_RS23090	0.15	-0.6
5,186,436	+		PFLU_RS23090	0.15	-1.5
5,186,436	+		PFLU_RS23090	0.15	-1.3
5,186,437	-		PFLU_RS23090	0.15	-2.3
5,186,437	-		PFLU_RS23090	0.15	-1.0
5,186,437	-		PFLU_RS23090	0.15	+3.3
5,186,437	-		PFLU_RS23090	0.15	+0.8
5,186,437	-		PFLU_RS23090	0.15	+3.7
5,186,572	+		PFLU_RS23090	0.35	-0.3
5,186,572	+		PFLU_RS23090	0.35	-1.6
5,186,572	+		PFLU_RS23090	0.35	+1.9
5,186,572	+		PFLU_RS23090	0.35	-0.1
5,186,572	+		PFLU_RS23090	0.35	+0.6
5,186,573	-		PFLU_RS23090	0.35	+0.5
5,186,573	-		PFLU_RS23090	0.35	+0.7
5,186,573	-		PFLU_RS23090	0.35	+1.3
5,186,610	+		PFLU_RS23090	0.41	+2.3
5,186,610	+		PFLU_RS23090	0.41	-1.7
5,186,610	+		PFLU_RS23090	0.41	-0.8
5,186,611	-		PFLU_RS23090	0.41	+1.6
5,186,611	-		PFLU_RS23090	0.41	-2.3
5,186,611	-		PFLU_RS23090	0.41	+2.0
5,186,611	-		PFLU_RS23090	0.41	+1.5
5,186,611	-		PFLU_RS23090	0.41	+0.4
5,186,763	+		PFLU_RS23090	0.64	-1.0
5,186,763	+		PFLU_RS23090	0.64	+1.5
5,186,763	+		PFLU_RS23090	0.64	+3.3
5,186,763	+		PFLU_RS23090	0.64	+2.0
5,186,763	+		PFLU_RS23090	0.64	+0.2
5,186,763	+		PFLU_RS23090	0.64	-1.3
5,186,763	+		PFLU_RS23090	0.64	-0.8
5,186,763	+		PFLU_RS23090	0.64	-1.2
5,186,763	+		PFLU_RS23090	0.64	-1.4
5,186,763	+		PFLU_RS23090	0.64	-0.7
5,186,763	+		PFLU_RS23090	0.64	+0.9
5,186,763	+		PFLU_RS23090	0.64	-1.6
5,186,764	-		PFLU_RS23090	0.64	+1.0
5,186,764	-		PFLU_RS23090	0.64	-2.2
5,186,764	-		PFLU_RS23090	0.64	-2.5
5,186,764	-		PFLU_RS23090	0.64	+2.2
5,186,764	-		PFLU_RS23090	0.64	+1.0
5,186,764	-		PFLU_RS23090	0.64	+1.0
5,186,764	-		PFLU_RS23090	0.64	+3.0
5,186,764	-		PFLU_RS23090	0.64	-0.3
5,186,764	-		PFLU_RS23090	0.64	+2.5
5,186,764	-		PFLU_RS23090	0.64	+0.4
5,186,764	-		PFLU_RS23090	0.64	-0.7
5,186,764	-		PFLU_RS23090	0.64	+0.3
5,186,775	+		PFLU_RS23090	0.66	+0.3
5,186,776	-		PFLU_RS23090	0.66	-2.3
5,186,820	+		PFLU_RS23090	0.73	+1.0
5,186,820	+		PFLU_RS23090	0.73	+0.1
5,186,820	+		PFLU_RS23090	0.73	+1.0
5,186,820	+		PFLU_RS23090	0.73	-0.0
5,186,820	+		PFLU_RS23090	0.73	-0.0
5,186,821	-		PFLU_RS23090	0.73	-0.9
5,186,821	-		PFLU_RS23090	0.73	+0.9
5,186,821	-		PFLU_RS23090	0.73	+3.7
5,186,947	+				+1.2
5,186,947	+				+0.2
5,186,948	-				+1.4
5,186,948	-				+1.0
5,186,948	-				-1.0
5,186,985	+				-1.5
5,186,985	+				+0.4
5,186,985	+				-2.8
5,186,985	+				-0.0
5,186,985	+				+0.7
5,186,985	+				+3.0
5,186,985	+				-2.6
5,186,985	+				+0.3
5,186,985	+				-0.1
5,186,985	+				+1.0
5,186,985	+				+2.2
5,186,985	+				-0.9
5,186,985	+				-1.6
5,186,985	+				-1.5
5,186,986	-				-0.9
5,186,986	-				+2.0
5,186,986	-				-2.1
5,186,986	-				+1.0
5,186,986	-				-0.9
5,186,986	-				+2.5
5,186,986	-				+0.9
5,187,091	+		PFLU_RS23095	0.11	-1.5
5,187,091	+		PFLU_RS23095	0.11	-0.0
5,187,091	+		PFLU_RS23095	0.11	+0.2
5,187,091	+		PFLU_RS23095	0.11	-1.9
5,187,091	+		PFLU_RS23095	0.11	-1.5
5,187,092	-		PFLU_RS23095	0.11	-0.0
5,187,092	-		PFLU_RS23095	0.11	-0.8
5,187,092	-		PFLU_RS23095	0.11	+0.4
5,187,303	-		PFLU_RS23095	0.33	-1.8
5,187,415	+		PFLU_RS23095	0.44	+0.5
5,187,415	+		PFLU_RS23095	0.44	+1.4
5,187,415	+		PFLU_RS23095	0.44	+1.0
5,187,415	+		PFLU_RS23095	0.44	+2.3
5,187,415	+		PFLU_RS23095	0.44	-0.1
5,187,415	+		PFLU_RS23095	0.44	-0.3
5,187,415	+		PFLU_RS23095	0.44	-0.8
5,187,415	+		PFLU_RS23095	0.44	-0.3
5,187,415	+		PFLU_RS23095	0.44	+0.2
5,187,415	+		PFLU_RS23095	0.44	-0.5
5,187,416	-		PFLU_RS23095	0.45	-1.8
5,187,416	-		PFLU_RS23095	0.45	-2.3
5,187,416	-		PFLU_RS23095	0.45	+0.2
5,187,416	-		PFLU_RS23095	0.45	-1.2
5,187,416	-		PFLU_RS23095	0.45	+1.4
5,187,416	-		PFLU_RS23095	0.45	+1.4
5,187,416	-		PFLU_RS23095	0.45	-0.6
5,187,416	-		PFLU_RS23095	0.45	-1.2
5,187,416	-		PFLU_RS23095	0.45	-1.7
5,187,426	+		PFLU_RS23095	0.46	+0.8
5,187,426	+		PFLU_RS23095	0.46	+1.7
5,187,426	+		PFLU_RS23095	0.46	-1.8
5,187,426	+		PFLU_RS23095	0.46	-2.1
5,187,427	-		PFLU_RS23095	0.46	-1.9
5,187,427	-		PFLU_RS23095	0.46	-1.3
5,187,427	-		PFLU_RS23095	0.46	-1.2
5,187,427	-		PFLU_RS23095	0.46	-2.0
5,187,427	-		PFLU_RS23095	0.46	-1.4
5,187,766	+		PFLU_RS23095	0.81	-1.8
5,187,766	+		PFLU_RS23095	0.81	-1.2
5,187,767	-		PFLU_RS23095	0.81	-2.0
5,187,767	-		PFLU_RS23095	0.81	-0.8
5,187,767	-		PFLU_RS23095	0.81	-0.8
5,187,767	-		PFLU_RS23095	0.81	-0.1
5,187,767	-		PFLU_RS23095	0.81	+0.2
5,187,767	-		PFLU_RS23095	0.81	-1.7
5,187,809	+		PFLU_RS23095	0.86	-1.2
5,187,809	+		PFLU_RS23095	0.86	+0.4
5,187,823	+		PFLU_RS23095	0.87	-1.8
5,187,823	+		PFLU_RS23095	0.87	-0.6
5,187,823	+		PFLU_RS23095	0.87	-0.8
5,187,823	+		PFLU_RS23095	0.87	-0.0
5,187,823	+		PFLU_RS23095	0.87	+1.7
5,187,824	-		PFLU_RS23095	0.87	+0.7
5,187,824	-		PFLU_RS23095	0.87	-0.2
5,187,889	+				-0.0
5,187,890	-				-1.2
5,187,890	-				-0.8
5,187,890	-				-1.5
5,187,959	+				+1.6
5,187,960	-				+3.0
5,187,987	+				-0.8
5,187,987	+				-0.8
5,187,987	+				+0.8
5,187,987	+				-0.2
5,187,987	+				+0.4
5,188,000	+				+0.2
5,188,000	+				-1.8
5,188,000	+				-0.3
5,188,000	+				-0.5
5,188,000	+				+0.9
5,188,000	+				+0.3
5,188,002	+				+2.4
5,188,002	+				+0.3
5,188,002	+				-2.3
5,188,002	+				+0.7
5,188,096	+				-2.0
5,188,132	+				+3.3
5,188,132	+				-0.4
5,188,132	+				+1.0
5,188,132	+				-1.9
5,188,132	+				-0.3
5,188,171	+				-1.0
5,188,171	+				+2.4
5,188,171	+				+2.0
5,188,171	+				-0.3
5,188,184	+				+1.6
5,188,184	+				-1.9
5,188,184	+				-0.5
5,188,184	+				+1.5
5,188,203	+				+2.6
5,188,203	+				-1.2
5,188,277	+				+0.2
5,188,277	+				-1.8
5,188,310	+				-3.0
5,188,310	+				+1.0
5,188,310	+				-0.7
5,188,310	+				-0.4
5,188,310	+				-0.6
5,188,310	+				+0.8
5,188,310	+				+1.0
5,188,310	+				-3.0
5,188,310	+				+2.7
5,188,310	+				-0.8
5,188,310	+				-1.3
5,188,310	+				-0.7
5,188,310	+				+0.2
5,188,310	+				-0.9
5,188,310	+				-1.0
5,188,310	+				+0.6
5,188,310	+				-0.3
5,188,310	+				-0.8
5,188,310	+				-2.2
5,188,310	+				-1.6
5,188,310	+				-3.1
5,188,310	+				+0.4
5,188,310	+				-0.6
5,188,310	+				-1.2
5,188,320	+				-2.5
5,188,320	+				+2.0
5,188,320	+				-0.8
5,188,320	+				+0.3
5,188,349	+				-1.7
5,188,356	+				+0.5
5,188,356	+				-1.2
5,188,356	+				-0.8
5,188,356	+				-1.6
5,188,356	+				-1.0