Strain Fitness in Pantoea sp. MT58 around IAI47_07630

Experiment: Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Survival; Treatment=FW106 (pH3.9); TreatmentDuration=0.5hrs; Outgrowth=LBkan50
1,614,838	-				-1.0
1,614,838	-				-0.1
1,614,885	+				-2.4
1,614,885	+				-1.6
1,614,885	+				+3.7
1,614,885	+				+2.1
1,614,885	+				+1.9
1,614,885	+				-0.7
1,614,885	+				+0.5
1,614,885	+				+2.4
1,614,886	-				+0.2
1,614,886	-				-0.3
1,614,886	-				-0.3
1,614,886	-				+1.5
1,614,886	-				-1.8
1,614,886	-				-0.8
1,614,886	-				-1.1
1,614,886	-				+0.6
1,614,886	-				-0.7
1,614,886	-				+0.7
1,614,886	-				+0.9
1,614,886	-				-1.6
1,614,886	-				+0.6
1,614,886	-				-1.1
1,614,897	+				+0.2
1,614,897	+				+4.2
1,614,898	-				-0.3
1,614,912	+				+0.5
1,614,913	-				+0.5
1,614,913	-				+0.7
1,614,913	-				+3.5
1,614,913	-				+0.1
1,615,181	+		IAI47_07625	0.33	+0.2
1,615,181	+		IAI47_07625	0.33	+2.5
1,615,223	+		IAI47_07625	0.38	-2.2
1,615,223	+		IAI47_07625	0.38	+1.9
1,615,223	+		IAI47_07625	0.38	+4.0
1,615,224	-		IAI47_07625	0.39	+3.8
1,615,224	-		IAI47_07625	0.39	-0.2
1,615,384	+		IAI47_07625	0.58	-1.1
1,615,384	+		IAI47_07625	0.58	+1.7
1,615,384	+		IAI47_07625	0.58	-1.8
1,615,385	-		IAI47_07625	0.58	+0.9
1,615,385	-		IAI47_07625	0.58	+2.7
1,615,385	-		IAI47_07625	0.58	+2.0
1,615,385	-		IAI47_07625	0.58	-0.5
1,615,402	+		IAI47_07625	0.60	-0.7
1,615,402	+		IAI47_07625	0.60	+0.5
1,615,413	+		IAI47_07625	0.61	+1.9
1,615,413	+		IAI47_07625	0.61	-1.8
1,615,414	-		IAI47_07625	0.61	-0.6
1,615,414	-		IAI47_07625	0.61	-2.0
1,615,643	-		IAI47_07625	0.88	-0.8
1,615,702	+				+3.7
1,615,703	-				+1.1
1,615,746	+				-1.5
1,615,746	+				-1.6
1,615,746	+				-0.3
1,615,747	-				+1.1
1,615,753	+				-2.5
1,615,755	+				+2.5
1,615,755	+				-2.3
1,615,755	+				-1.2
1,615,756	-				+3.0
1,615,827	+				+0.5
1,615,827	+				+2.2
1,615,827	+				+1.8
1,615,827	+				+1.8
1,615,827	+				-2.1
1,615,827	+				+2.5
1,615,827	+				-1.6
1,615,828	-				-1.9
1,615,828	-				-0.4
1,615,828	-				+3.8
1,615,828	-				+2.1
1,615,828	-				+0.2
1,615,828	-				+3.1
1,615,828	-				+1.9
1,615,988	+		IAI47_07630	0.27	-3.4
1,616,032	+		IAI47_07630	0.31	+0.2
1,616,032	+		IAI47_07630	0.31	+1.5
1,616,032	+		IAI47_07630	0.31	+3.0
1,616,032	+		IAI47_07630	0.31	-1.4
1,616,032	+		IAI47_07630	0.31	+0.9
1,616,032	+		IAI47_07630	0.31	-1.2
1,616,032	+		IAI47_07630	0.31	+1.7
1,616,032	+		IAI47_07630	0.31	+4.5
1,616,033	-		IAI47_07630	0.31	-1.6
1,616,033	-		IAI47_07630	0.31	-0.5
1,616,033	-		IAI47_07630	0.31	+1.8
1,616,033	-		IAI47_07630	0.31	-2.3
1,616,033	-		IAI47_07630	0.31	-0.5
1,616,033	-		IAI47_07630	0.31	+1.5
1,616,033	-		IAI47_07630	0.31	+0.5
1,616,067	+		IAI47_07630	0.35	+1.2
1,616,067	+		IAI47_07630	0.35	+0.4
1,616,067	+		IAI47_07630	0.35	+1.4
1,616,067	+		IAI47_07630	0.35	-0.5
1,616,068	-		IAI47_07630	0.35	-1.3
1,616,068	-		IAI47_07630	0.35	-0.6
1,616,068	-		IAI47_07630	0.35	-1.1
1,616,068	-		IAI47_07630	0.35	+0.8
1,616,077	+		IAI47_07630	0.36	+0.5
1,616,077	+		IAI47_07630	0.36	-1.1
1,616,078	-		IAI47_07630	0.36	-0.4
1,616,124	-		IAI47_07630	0.41	-1.7
1,616,252	+		IAI47_07630	0.55	-1.5
1,616,252	+		IAI47_07630	0.55	-0.0
1,616,252	+		IAI47_07630	0.55	-2.6
1,616,253	-		IAI47_07630	0.55	+3.0
1,616,375	+		IAI47_07630	0.68	+1.7
1,616,662	+				+3.1
1,616,665	+				-2.3
1,616,665	+				+2.3
1,616,665	+				+3.3
1,616,665	+				-3.4
1,616,665	+				-2.0
1,616,665	+				-1.3
1,616,665	+				-1.0
1,616,665	+				-1.1
1,616,665	+				-0.3
1,616,665	+				+0.2
1,616,666	-				+1.6
1,616,666	-				+2.1
1,616,666	-				+1.5
1,616,666	-				-0.7
1,616,666	-				+0.1
1,616,679	+				-0.3
1,616,679	+				-0.5
1,616,679	+				-0.8
1,616,679	+				-2.4
1,616,680	-				-1.2
1,616,800	+		IAI47_07635	0.12	+0.2
1,616,956	+		IAI47_07635	0.25	-1.8
1,616,956	+		IAI47_07635	0.25	+1.5
1,616,956	+		IAI47_07635	0.25	+2.3
1,616,956	+		IAI47_07635	0.25	+0.5
1,616,956	+		IAI47_07635	0.25	+1.7
1,616,957	-		IAI47_07635	0.25	-1.2
1,616,957	-		IAI47_07635	0.25	+0.7
1,617,026	-		IAI47_07635	0.31	+2.1
1,617,026	-		IAI47_07635	0.31	+3.1
1,617,026	-		IAI47_07635	0.31	-0.1
1,617,113	+		IAI47_07635	0.39	-0.8
1,617,114	-		IAI47_07635	0.39	-0.5
1,617,114	-		IAI47_07635	0.39	-1.3
1,617,124	+		IAI47_07635	0.40	+1.5
1,617,124	+		IAI47_07635	0.40	+4.1
1,617,124	+		IAI47_07635	0.40	-1.8
1,617,124	+		IAI47_07635	0.40	-0.7
1,617,124	+		IAI47_07635	0.40	+1.3
1,617,124	+		IAI47_07635	0.40	-2.2
1,617,124	+		IAI47_07635	0.40	-2.3
1,617,125	-		IAI47_07635	0.40	+0.9
1,617,125	-		IAI47_07635	0.40	-1.7
1,617,125	-		IAI47_07635	0.40	-1.4
1,617,125	-		IAI47_07635	0.40	-0.1
1,617,253	+		IAI47_07635	0.51	+1.9
1,617,254	-		IAI47_07635	0.52	+2.0
1,617,254	-		IAI47_07635	0.52	+0.2
1,617,293	-		IAI47_07635	0.55	-1.0
1,617,436	+		IAI47_07635	0.68	+1.3
1,617,518	+		IAI47_07635	0.75	-1.8
1,617,521	+		IAI47_07635	0.75	-1.2
1,617,521	+		IAI47_07635	0.75	+0.9
1,617,522	-		IAI47_07635	0.75	-1.1
1,617,574	-		IAI47_07635	0.80	-1.1
1,617,640	+		IAI47_07635	0.86	+0.3
1,617,640	+		IAI47_07635	0.86	-2.2
1,617,641	-		IAI47_07635	0.86	-2.0
1,617,641	-		IAI47_07635	0.86	+2.7
1,617,641	-		IAI47_07635	0.86	+1.7
1,617,665	+		IAI47_07635	0.88	+2.5
1,617,665	+		IAI47_07635	0.88	-0.1
1,617,665	+		IAI47_07635	0.88	+0.2
1,617,666	-		IAI47_07635	0.88	+2.5
1,617,666	-		IAI47_07635	0.88	+0.9