Strain Fitness in Dechlorosoma suillum PS around Dsui_2012

Experiment: ALP with nitrite 0.45 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with nitrite 0.45 mM
2,121,223	-				-1.1
2,121,241	-				-0.1
2,121,264	-				+0.9
2,121,301	-		Dsui_2011	0.66	+0.9
2,121,351	+		Dsui_2011	0.68	-1.7
2,121,371	+		Dsui_2011	0.69	+0.9
2,121,371	+		Dsui_2011	0.69	+0.9
2,121,371	+		Dsui_2011	0.69	-1.4
2,121,371	+		Dsui_2011	0.69	-2.2
2,121,379	-		Dsui_2011	0.69	-0.1
2,121,379	-		Dsui_2011	0.69	-1.1
2,121,379	-		Dsui_2011	0.69	+0.9
2,121,441	+		Dsui_2011	0.72	-1.2
2,121,496	+		Dsui_2011	0.74	-1.4
2,121,504	-				+0.9
2,121,586	-		Dsui_2011	0.77	+0.9
2,121,687	-		Dsui_2011	0.81	+0.9
2,121,692	-		Dsui_2011	0.81	-1.1
2,121,697	+		Dsui_2011	0.81	-0.7
2,121,748	-		Dsui_2011	0.83	-1.7
2,121,758	+		Dsui_2011	0.84	-0.1
2,121,791	-		Dsui_2011	0.85	-1.1
2,121,836	+		Dsui_2011	0.87	+0.9
2,121,851	-		Dsui_2011	0.87	-0.1
2,121,902	-		Dsui_2011	0.89	-0.1
2,121,916	-		Dsui_2011	0.90	-0.1
2,121,955	+				-1.1
2,121,962	+				+0.9
2,122,025	+				-1.1
2,122,043	-				-0.1
2,122,089	+				-0.1
2,122,112	+				-1.4
2,122,182	+				-0.7
2,122,182	+				+0.9
2,122,184	+				+0.9
2,122,184	+				-0.1
2,122,184	+				-1.7
2,122,192	-				+0.9
2,122,192	-				+0.9
2,122,192	-				+0.9
2,122,192	-				-0.7
2,122,192	-				-0.1
2,122,192	-				-0.1
2,122,192	-				-1.1
2,122,259	+				-0.1
2,122,259	+				-0.1
2,122,323	+				-0.1
2,122,375	+				+0.1
2,122,491	+		Dsui_2012	0.15	-0.1
2,122,516	+		Dsui_2012	0.17	+0.1
2,122,570	+		Dsui_2012	0.20	-1.7
2,122,600	-		Dsui_2012	0.21	-0.1
2,122,620	+		Dsui_2012	0.23	+0.9
2,122,620	+		Dsui_2012	0.23	+0.9
2,122,628	-				+0.9
2,122,628	-				+0.9
2,122,763	+		Dsui_2012	0.31	-2.4
2,122,814	+		Dsui_2012	0.34	-1.1
2,122,839	+		Dsui_2012	0.35	-0.7
2,122,841	-		Dsui_2012	0.35	+0.9
2,122,899	+		Dsui_2012	0.39	+0.9
2,122,907	-		Dsui_2012	0.39	+0.9
2,122,907	-				+0.9
2,122,907	-		Dsui_2012	0.39	-0.7
2,122,907	-		Dsui_2012	0.39	-0.1
2,122,915	+		Dsui_2012	0.39	-0.7
2,122,918	+		Dsui_2012	0.40	+0.9
2,122,923	-		Dsui_2012	0.40	-1.7
2,122,925	-		Dsui_2012	0.40	+0.9
2,122,936	-		Dsui_2012	0.41	-0.1
2,122,951	+		Dsui_2012	0.41	-1.1
2,122,965	+		Dsui_2012	0.42	-0.7
2,122,967	+		Dsui_2012	0.42	+0.9
2,122,967	+		Dsui_2012	0.42	-0.1
2,122,967	+		Dsui_2012	0.42	+0.9
2,122,967	+		Dsui_2012	0.42	-0.1
2,122,967	+		Dsui_2012	0.42	+0.9
2,122,967	+		Dsui_2012	0.42	-1.7
2,122,967	+		Dsui_2012	0.42	-0.7
2,122,967	+		Dsui_2012	0.42	+0.9
2,122,967	+		Dsui_2012	0.42	+0.9
2,122,967	+		Dsui_2012	0.42	-0.1
2,122,967	+		Dsui_2012	0.42	-0.1
2,122,972	-		Dsui_2012	0.43	-0.7
2,122,975	-		Dsui_2012	0.43	-1.1
2,122,975	-		Dsui_2012	0.43	-1.7
2,122,975	-		Dsui_2012	0.43	-0.7
2,122,975	-		Dsui_2012	0.43	-0.7
2,122,975	-		Dsui_2012	0.43	+0.9
2,123,092	-		Dsui_2012	0.50	-0.1
2,123,106	+		Dsui_2012	0.50	-2.5
2,123,161	+		Dsui_2012	0.53	+0.9
2,123,169	-		Dsui_2012	0.54	-1.1
2,123,174	-		Dsui_2012	0.54	-0.1
2,123,177	-		Dsui_2012	0.54	-0.1
2,123,183	+		Dsui_2012	0.55	+0.9
2,123,205	-		Dsui_2012	0.56	+0.9
2,123,205	-		Dsui_2012	0.56	-1.9
2,123,262	+		Dsui_2012	0.59	+0.9
2,123,274	-		Dsui_2012	0.60	+0.9
2,123,289	+		Dsui_2012	0.61	+0.4
2,123,290	+		Dsui_2012	0.61	-0.7
2,123,292	+		Dsui_2012	0.61	+0.9
2,123,292	-		Dsui_2012	0.61	+0.9
2,123,292	-		Dsui_2012	0.61	-0.1
2,123,298	-		Dsui_2012	0.61	+0.9
2,123,348	+		Dsui_2012	0.64	-1.7
2,123,348	+		Dsui_2012	0.64	-0.1
2,123,348	+		Dsui_2012	0.64	-0.1
2,123,348	+		Dsui_2012	0.64	-0.1
2,123,348	+		Dsui_2012	0.64	+2.5
2,123,348	+		Dsui_2012	0.64	+0.9
2,123,348	+		Dsui_2012	0.64	-0.1
2,123,348	+		Dsui_2012	0.64	+0.9
2,123,348	+		Dsui_2012	0.64	-1.1
2,123,356	-		Dsui_2012	0.65	-0.7
2,123,356	-		Dsui_2012	0.65	+0.9
2,123,356	-		Dsui_2012	0.65	+0.9
2,123,356	-		Dsui_2012	0.65	+0.9
2,123,356	-		Dsui_2012	0.65	-1.4
2,123,367	+		Dsui_2012	0.65	-2.5
2,123,387	+		Dsui_2012	0.66	-0.1
2,123,387	+		Dsui_2012	0.66	-0.7
2,123,392	+		Dsui_2012	0.67	+0.9
2,123,396	-		Dsui_2012	0.67	-0.1
2,123,396	-		Dsui_2012	0.67	+0.9
2,123,400	-		Dsui_2012	0.67	+0.9
2,123,429	-		Dsui_2012	0.69	+0.9
2,123,439	-		Dsui_2012	0.69	+0.9
2,123,446	+		Dsui_2012	0.70	-0.1
2,123,446	+		Dsui_2012	0.70	-0.1
2,123,454	-				-0.7
2,123,499	+		Dsui_2012	0.73	+0.9
2,123,551	+		Dsui_2012	0.76	+0.9
2,123,553	-		Dsui_2012	0.76	-0.1
2,123,554	+		Dsui_2012	0.76	+0.9
2,123,613	-		Dsui_2012	0.79	-0.7
2,123,619	+		Dsui_2012	0.80	+0.9
2,123,624	+		Dsui_2012	0.80	-0.5
2,123,632	-		Dsui_2012	0.80	-2.1
2,123,632	-		Dsui_2012	0.80	-0.1
2,123,637	-				-0.1
2,123,638	+		Dsui_2012	0.81	+0.9
2,123,639	+		Dsui_2012	0.81	+0.9
2,123,639	+		Dsui_2012	0.81	+0.9
2,123,646	-		Dsui_2012	0.81	+0.9
2,123,653	-		Dsui_2012	0.81	-0.1
2,123,655	+		Dsui_2012	0.82	-0.1
2,123,655	+		Dsui_2012	0.82	-1.1
2,123,655	+		Dsui_2012	0.82	+0.9
2,123,655	+		Dsui_2012	0.82	+1.9
2,123,655	+		Dsui_2012	0.82	+0.9
2,123,655	+		Dsui_2012	0.82	+0.9
2,123,655	+		Dsui_2012	0.82	+0.9
2,123,655	+		Dsui_2012	0.82	-0.1
2,123,655	+		Dsui_2012	0.82	-1.9
2,123,655	+		Dsui_2012	0.82	-1.1
2,123,655	+		Dsui_2012	0.82	+0.9
2,123,655	+		Dsui_2012	0.82	-2.2
2,123,655	+		Dsui_2012	0.82	+0.9
2,123,661	-		Dsui_2012	0.82	+0.9
2,123,663	-		Dsui_2012	0.82	-0.7
2,123,663	-		Dsui_2012	0.82	+0.9
2,123,709	-				+0.9
2,123,715	-		Dsui_2012	0.85	+0.9
2,123,715	-		Dsui_2012	0.85	-0.1
2,123,732	+		Dsui_2012	0.86	-0.7
2,123,739	+		Dsui_2012	0.86	-0.7
2,123,739	+		Dsui_2012	0.86	-1.4
2,123,739	+		Dsui_2012	0.86	-0.1
2,123,739	+		Dsui_2012	0.86	+0.9
2,123,739	+		Dsui_2012	0.86	+1.9
2,123,739	+		Dsui_2012	0.86	-1.7
2,123,739	+		Dsui_2012	0.86	-0.1
2,123,740	+		Dsui_2012	0.86	-0.1
2,123,747	-		Dsui_2012	0.87	-0.1
2,123,747	-		Dsui_2012	0.87	-0.1
2,123,764	-				+0.9
2,123,810	+				-0.7
2,123,856	+				-0.4
2,123,858	+				+0.9
2,123,877	+				-1.7
2,123,877	+				+0.9
2,123,877	+				-0.0
2,123,877	+				-0.1
2,123,877	+				-0.7
2,123,877	+				+0.9
2,123,877	+				-0.1
2,123,877	+				-0.1
2,123,877	+				+0.9
2,123,877	+				+0.9
2,123,877	+				-0.1
2,123,877	+				+0.9
2,123,877	+				+0.9
2,123,877	+				+0.9
2,123,877	+				+0.9
2,123,877	+				-0.1
2,123,877	+				-0.7
2,123,877	+				-1.1
2,123,877	+				+0.9
2,123,877	+				+0.9
2,123,877	+				+0.9
2,123,877	+				-1.7
2,123,885	-				-1.1
2,123,885	-				-0.7
2,123,885	-				-0.7
2,123,885	-				-0.1
2,123,885	-				-0.1
2,123,885	-				-0.7
2,123,885	-				+0.9
2,123,885	-				+0.9
2,123,885	-				-0.1
2,123,885	-				-1.4
2,123,885	-				-0.7
2,123,885	-				+0.9
2,123,885	-				+0.9
2,123,885	-				+0.9
2,123,885	-				+0.9
2,123,885	-				-0.1
2,123,885	-				-0.7
2,123,885	-				-1.1
2,123,885	-				+0.9
2,123,885	-				+0.9
2,123,885	-				-0.1
2,123,894	+				-0.1
2,123,894	+				+1.5
2,123,894	+				-1.1
2,123,899	-				+0.9
2,123,900	+				-2.5
2,123,902	-				-1.1
2,123,902	-				-0.1
2,123,915	+				-0.7
2,123,917	+				+0.9
2,123,923	-				+0.9
2,123,947	+				+0.9
2,123,995	+				-0.7
2,124,018	+				+0.9
2,124,018	+				+0.9
2,124,026	-				+0.9
2,124,043	+				-0.1
2,124,045	+				-1.1
2,124,053	-				-1.1
2,124,058	-				+0.9
2,124,072	+				-1.1
2,124,088	+				+0.9
2,124,112	+				-2.8
2,124,117	+				-0.1
2,124,117	+				-1.4
2,124,120	-				+0.9
2,124,120	-				+0.9
2,124,120	-				+0.9
2,124,187	+				+0.9
2,124,204	-				-0.1
2,124,204	-				+0.9
2,124,285	+				-1.1
2,124,287	+				-0.1
2,124,294	-				-0.7
2,124,303	+				+0.9
2,124,341	+				-0.7
2,124,341	+				+0.9
2,124,341	+				+0.9
2,124,375	+				-1.1
2,124,380	+				+0.9
2,124,383	-				-0.1
2,124,393	-				+0.9
2,124,403	+				-0.1
2,124,403	+				+0.9
2,124,403	+				+0.9
2,124,412	-				+0.9