Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22385

Experiment: L-tyrosine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine (N)
4,902,138	+		AO353_22380	0.15	+0.2
4,902,273	+		AO353_22380	0.30	-0.7
4,902,273	+		AO353_22380	0.30	-0.7
4,902,274	-		AO353_22380	0.31	+0.0
4,902,274	-		AO353_22380	0.31	+0.1
4,902,274	-		AO353_22380	0.31	-1.4
4,902,274	-		AO353_22380	0.31	-0.8
4,902,336	+		AO353_22380	0.38	-1.2
4,902,349	-				-0.4
4,902,394	+		AO353_22380	0.44	-0.4
4,902,394	+		AO353_22380	0.44	-0.0
4,902,394	+		AO353_22380	0.44	-0.6
4,902,395	-		AO353_22380	0.44	+0.5
4,902,395	-		AO353_22380	0.44	-0.4
4,902,395	-		AO353_22380	0.44	+0.6
4,902,395	-		AO353_22380	0.44	-0.2
4,902,395	-		AO353_22380	0.44	+0.2
4,902,528	+		AO353_22380	0.60	-0.1
4,902,566	+		AO353_22380	0.64	+0.5
4,902,567	-		AO353_22380	0.64	-2.2
4,902,709	-		AO353_22380	0.80	-1.8
4,902,777	+		AO353_22380	0.88	+1.6
4,902,777	+		AO353_22380	0.88	+0.4
4,902,835	-				-0.7
4,902,843	+				+0.4
4,902,843	+				+0.4
4,902,844	-				+0.7
4,902,844	-				-0.4
4,902,873	+				-0.0
4,902,873	+				-1.0
4,902,873	+				+0.4
4,902,873	+				+0.4
4,902,873	+				+0.0
4,902,874	-				+0.2
4,902,874	-				-1.1
4,902,874	-				+0.6
4,902,874	-				+0.4
4,902,874	-				-0.3
4,902,962	+				-0.2
4,902,962	+				-2.5
4,902,962	+				-0.4
4,902,963	-				-1.4
4,902,963	-				-0.5
4,902,963	-				-0.2
4,902,966	+				-1.7
4,902,966	+				-1.1
4,902,966	+				-0.4
4,902,966	+				-0.5
4,902,966	+				-1.2
4,902,966	+				-0.7
4,902,966	+				-1.3
4,902,966	+				-0.3
4,902,966	+				-0.0
4,902,966	+				-0.0
4,902,967	-				-2.6
4,902,967	-				-0.1
4,902,967	-				-0.3
4,902,967	-				+0.8
4,902,967	-				+1.6
4,902,967	-				-2.9
4,902,969	+				-1.2
4,902,970	-				-0.2
4,902,977	+				-2.0
4,902,977	+				-0.6
4,902,978	-				+0.1
4,902,978	-				-0.1
4,903,057	+				+0.9
4,903,099	-				-1.9
4,903,099	-				-2.0
4,903,376	+		AO353_22385	0.16	+0.7
4,903,376	+		AO353_22385	0.16	+0.3
4,903,376	+		AO353_22385	0.16	-0.2
4,903,376	+				-0.7
4,903,376	+		AO353_22385	0.16	+0.0
4,903,376	+		AO353_22385	0.16	-0.3
4,903,376	+		AO353_22385	0.16	-0.5
4,903,376	+		AO353_22385	0.16	-0.1
4,903,376	+		AO353_22385	0.16	-1.2
4,903,377	-		AO353_22385	0.16	-0.8
4,903,377	-		AO353_22385	0.16	-1.8
4,903,377	-		AO353_22385	0.16	-0.5
4,903,377	-		AO353_22385	0.16	-1.5
4,903,377	-		AO353_22385	0.16	-1.4
4,903,377	-		AO353_22385	0.16	-0.7
4,903,391	+		AO353_22385	0.17	-2.3
4,903,617	-		AO353_22385	0.30	-0.6
4,903,617	-		AO353_22385	0.30	+1.0
4,903,641	+		AO353_22385	0.31	-0.7
4,903,709	+		AO353_22385	0.35	-0.3
4,903,709	+		AO353_22385	0.35	-1.0
4,903,710	-		AO353_22385	0.35	-0.9
4,903,710	-		AO353_22385	0.35	-1.0
4,903,770	-		AO353_22385	0.39	-1.0
4,903,776	-		AO353_22385	0.39	-1.0
4,903,883	+		AO353_22385	0.45	-1.5
4,903,884	-		AO353_22385	0.45	-1.2
4,903,886	+		AO353_22385	0.45	-0.8
4,903,886	+		AO353_22385	0.45	+0.0
4,903,886	+		AO353_22385	0.45	-0.9
4,903,887	-		AO353_22385	0.45	-2.3
4,903,887	-		AO353_22385	0.45	+0.2
4,903,887	-		AO353_22385	0.45	-1.4
4,903,887	-		AO353_22385	0.45	-1.0
4,903,970	+		AO353_22385	0.50	-1.5
4,903,970	+		AO353_22385	0.50	+0.8
4,903,971	-		AO353_22385	0.50	-1.4
4,903,971	-		AO353_22385	0.50	-0.4
4,904,087	+		AO353_22385	0.56	-1.3
4,904,087	+		AO353_22385	0.56	-0.3
4,904,088	-		AO353_22385	0.56	-1.0
4,904,088	-		AO353_22385	0.56	-2.1
4,904,088	-		AO353_22385	0.56	+0.2
4,904,147	+		AO353_22385	0.60	-0.8
4,904,147	+		AO353_22385	0.60	-1.2
4,904,147	+		AO353_22385	0.60	-0.5
4,904,147	+		AO353_22385	0.60	-1.7
4,904,147	+		AO353_22385	0.60	-1.7
4,904,147	+		AO353_22385	0.60	-1.1
4,904,148	-				+1.4
4,904,242	+		AO353_22385	0.65	-1.4
4,904,242	+		AO353_22385	0.65	+0.6
4,904,243	-		AO353_22385	0.65	+0.6
4,904,246	+		AO353_22385	0.65	-0.8
4,904,246	+		AO353_22385	0.65	-0.4
4,904,352	-		AO353_22385	0.71	-1.4
4,904,352	-		AO353_22385	0.71	-2.9
4,904,352	-		AO353_22385	0.71	+0.0
4,904,375	+		AO353_22385	0.73	-0.5
4,904,375	+		AO353_22385	0.73	-0.9
4,904,375	+		AO353_22385	0.73	-1.5
4,904,375	+		AO353_22385	0.73	-2.8
4,904,375	+		AO353_22385	0.73	+3.9
4,904,375	+		AO353_22385	0.73	+0.5
4,904,375	+		AO353_22385	0.73	-0.3
4,904,375	+		AO353_22385	0.73	-0.4
4,904,375	+		AO353_22385	0.73	-2.1
4,904,376	-		AO353_22385	0.73	-1.5
4,904,376	-		AO353_22385	0.73	+0.6
4,904,376	-		AO353_22385	0.73	-0.5
4,904,376	-		AO353_22385	0.73	-1.5
4,904,376	-		AO353_22385	0.73	-0.4
4,904,376	-		AO353_22385	0.73	+0.5
4,904,376	-		AO353_22385	0.73	-1.1
4,904,376	-		AO353_22385	0.73	-0.7
4,904,376	-		AO353_22385	0.73	-0.3
4,904,380	-		AO353_22385	0.73	-1.1
4,904,486	+		AO353_22385	0.79	-1.6
4,904,486	+		AO353_22385	0.79	-0.8
4,904,486	+		AO353_22385	0.79	-1.7
4,904,487	-		AO353_22385	0.79	-0.6
4,904,487	-		AO353_22385	0.79	-1.3
4,904,487	-		AO353_22385	0.79	-0.3
4,904,487	-		AO353_22385	0.79	-0.8
4,904,487	-		AO353_22385	0.79	-2.9
4,904,549	+		AO353_22385	0.82	-0.9
4,904,550	-		AO353_22385	0.82	+0.5
4,904,698	+				-2.6
4,904,698	+				-0.8
4,904,723	+				-0.7
4,904,724	-				+0.6
4,904,724	-				+0.5
4,904,724	-				-2.3
4,904,883	+				-0.5
4,904,900	+				-1.6
4,904,901	-				+0.6
4,904,961	+				-0.5
4,904,961	+				-0.2
4,904,961	+				-1.4
4,904,961	+				-0.5
4,904,961	+				+1.0
4,904,962	-				-2.2
4,904,962	-				-0.3
4,904,962	-				+1.0
4,904,962	-				-1.0
4,904,962	-				+0.3
4,904,962	-				+0.0
4,905,022	+				-0.7
4,905,118	+				+2.0
4,905,118	+				-0.4
4,905,118	+				+0.5
4,905,119	-				-0.7
4,905,119	-				+0.6
4,905,368	+		AO353_22390	0.23	+0.9
4,905,368	+		AO353_22390	0.23	+0.2
4,905,368	+		AO353_22390	0.23	+2.1
4,905,369	-		AO353_22390	0.23	-0.7
4,905,369	-		AO353_22390	0.23	+0.7
4,905,394	+		AO353_22390	0.25	-0.4
4,905,395	-		AO353_22390	0.25	-0.5