Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_855

Experiment: sodium carbonate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium carbonate 0.0125 M
1,000,195	-				+1.5
1,000,344	+		Pf6N2E2_854	0.21	-0.5
1,000,412	+		Pf6N2E2_854	0.30	-0.5
1,000,472	+		Pf6N2E2_854	0.37	-0.8
1,000,472	+		Pf6N2E2_854	0.37	+0.1
1,000,540	-		Pf6N2E2_854	0.45	+1.3
1,000,551	+		Pf6N2E2_854	0.47	-0.9
1,000,551	+		Pf6N2E2_854	0.47	-0.4
1,000,603	+		Pf6N2E2_854	0.53	-0.0
1,000,604	-		Pf6N2E2_854	0.53	+0.0
1,000,624	-		Pf6N2E2_854	0.56	-0.0
1,000,663	+		Pf6N2E2_854	0.60	+0.5
1,000,663	+		Pf6N2E2_854	0.60	-0.3
1,000,663	+		Pf6N2E2_854	0.60	+0.8
1,000,663	+		Pf6N2E2_854	0.60	+0.5
1,000,663	+		Pf6N2E2_854	0.60	+1.1
1,000,663	+		Pf6N2E2_854	0.60	-0.4
1,000,664	-		Pf6N2E2_854	0.61	+0.2
1,000,664	-		Pf6N2E2_854	0.61	+0.5
1,000,719	+		Pf6N2E2_854	0.67	+2.4
1,000,719	+		Pf6N2E2_854	0.67	-0.0
1,000,719	+		Pf6N2E2_854	0.67	-0.7
1,000,719	+		Pf6N2E2_854	0.67	-0.6
1,000,719	+		Pf6N2E2_854	0.67	+0.4
1,000,719	+		Pf6N2E2_854	0.67	+1.0
1,000,720	-		Pf6N2E2_854	0.68	+0.1
1,000,720	-		Pf6N2E2_854	0.68	+0.6
1,000,755	+		Pf6N2E2_854	0.72	+0.3
1,000,755	+		Pf6N2E2_854	0.72	+0.7
1,000,755	+		Pf6N2E2_854	0.72	-1.5
1,000,755	+		Pf6N2E2_854	0.72	+0.3
1,000,804	+		Pf6N2E2_854	0.78	-0.8
1,000,804	+		Pf6N2E2_854	0.78	-0.2
1,000,804	+		Pf6N2E2_854	0.78	+0.8
1,000,805	-		Pf6N2E2_854	0.78	+0.9
1,000,805	-		Pf6N2E2_854	0.78	+1.2
1,000,835	-		Pf6N2E2_854	0.82	-1.5
1,000,835	-		Pf6N2E2_854	0.82	+0.6
1,000,895	-		Pf6N2E2_854	0.89	+0.1
1,000,926	+				-0.1
1,000,926	+				+0.2
1,000,926	+				-0.3
1,001,069	+				-0.6
1,001,218	-				-0.4
1,001,347	-		Pf6N2E2_855	0.24	-1.1
1,001,548	-		Pf6N2E2_855	0.48	-1.1
1,001,548	-		Pf6N2E2_855	0.48	-1.9
1,001,819	-		Pf6N2E2_855	0.82	-0.2
1,002,151	-		Pf6N2E2_856	0.14	+0.3
1,002,164	-		Pf6N2E2_856	0.15	-0.1
1,002,167	-		Pf6N2E2_856	0.16	-1.4
1,002,167	-		Pf6N2E2_856	0.16	-0.9
1,002,167	-		Pf6N2E2_856	0.16	-0.5
1,002,167	-		Pf6N2E2_856	0.16	-0.9
1,002,167	-		Pf6N2E2_856	0.16	+1.1
1,002,167	-		Pf6N2E2_856	0.16	+0.5
1,002,167	-		Pf6N2E2_856	0.16	+1.8
1,002,167	-		Pf6N2E2_856	0.16	-0.3
1,002,167	-		Pf6N2E2_856	0.16	+0.6
1,002,254	-		Pf6N2E2_856	0.24	+0.7
1,002,254	-		Pf6N2E2_856	0.24	-0.6
1,002,254	-		Pf6N2E2_856	0.24	+1.6
1,002,254	-		Pf6N2E2_856	0.24	+0.7
1,002,284	-		Pf6N2E2_856	0.27	+0.5
1,002,433	-		Pf6N2E2_856	0.42	-0.1
1,002,547	+		Pf6N2E2_856	0.53	+1.1
1,002,636	+		Pf6N2E2_856	0.62	+0.7
1,002,637	-		Pf6N2E2_856	0.62	+0.1
1,002,712	-		Pf6N2E2_856	0.70	+1.1
1,002,712	-		Pf6N2E2_856	0.70	+0.9
1,002,865	+		Pf6N2E2_856	0.85	-0.8
1,002,865	+		Pf6N2E2_856	0.85	-0.4
1,002,866	-		Pf6N2E2_856	0.85	+1.4