Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4834

Experiment: sodium carbonate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium carbonate 0.0125 M
5,585,835	+				+0.1
5,585,835	+				+0.4
5,585,835	+				+0.6
5,585,835	+				-0.1
5,585,835	+				+0.5
5,585,836	-				+0.9
5,585,836	-				+0.3
5,585,836	-				-1.0
5,585,836	-				+0.6
5,585,840	+				-0.6
5,585,840	+				+0.4
5,585,840	+				+1.5
5,585,840	+				+0.6
5,585,841	-				-0.8
5,585,841	-				-0.9
5,585,841	-				+0.2
5,585,841	-				-0.9
5,585,901	+				-0.5
5,585,901	+				-0.6
5,585,901	+				+0.3
5,585,902	-				-0.6
5,585,902	-				-0.9
5,585,902	-				+0.5
5,585,916	+		Pf6N2E2_4833	0.11	+0.2
5,585,916	+		Pf6N2E2_4833	0.11	+1.9
5,585,916	+		Pf6N2E2_4833	0.11	-1.8
5,585,916	+		Pf6N2E2_4833	0.11	+1.3
5,585,917	-		Pf6N2E2_4833	0.11	-0.4
5,585,940	+		Pf6N2E2_4833	0.13	+1.1
5,585,940	+		Pf6N2E2_4833	0.13	+0.7
5,585,940	+		Pf6N2E2_4833	0.13	+0.7
5,585,941	-		Pf6N2E2_4833	0.13	+0.4
5,585,941	-		Pf6N2E2_4833	0.13	+1.0
5,585,941	-		Pf6N2E2_4833	0.13	-0.1
5,585,941	-		Pf6N2E2_4833	0.13	+0.5
5,585,978	-		Pf6N2E2_4833	0.17	+1.1
5,585,978	-		Pf6N2E2_4833	0.17	-1.2
5,586,040	+		Pf6N2E2_4833	0.23	-0.2
5,586,040	+		Pf6N2E2_4833	0.23	+0.1
5,586,041	-		Pf6N2E2_4833	0.24	+0.3
5,586,308	+		Pf6N2E2_4833	0.51	-2.2
5,586,308	+		Pf6N2E2_4833	0.51	-0.3
5,586,309	-		Pf6N2E2_4833	0.51	+0.5
5,586,309	-		Pf6N2E2_4833	0.51	+0.3
5,586,309	-		Pf6N2E2_4833	0.51	+0.6
5,586,326	+		Pf6N2E2_4833	0.53	+0.4
5,586,326	+		Pf6N2E2_4833	0.53	+0.3
5,586,327	-		Pf6N2E2_4833	0.53	-0.3
5,586,361	-		Pf6N2E2_4833	0.57	-0.4
5,586,518	+		Pf6N2E2_4833	0.73	-0.4
5,586,518	+		Pf6N2E2_4833	0.73	+0.8
5,586,518	+		Pf6N2E2_4833	0.73	+0.7
5,586,518	+		Pf6N2E2_4833	0.73	-0.5
5,586,597	+		Pf6N2E2_4833	0.81	+1.5
5,586,597	+		Pf6N2E2_4833	0.81	+1.2
5,586,597	+		Pf6N2E2_4833	0.81	-1.3
5,586,597	+		Pf6N2E2_4833	0.81	-1.4
5,586,597	+		Pf6N2E2_4833	0.81	+0.2
5,586,598	-		Pf6N2E2_4833	0.81	+1.5
5,586,598	-		Pf6N2E2_4833	0.81	-0.0
5,586,598	-		Pf6N2E2_4833	0.81	+0.6
5,586,598	-		Pf6N2E2_4833	0.81	-0.5
5,586,638	+		Pf6N2E2_4833	0.85	-0.8
5,586,639	-		Pf6N2E2_4833	0.86	-2.7
5,586,639	-		Pf6N2E2_4833	0.86	-1.6
5,586,639	-		Pf6N2E2_4833	0.86	-0.5
5,586,753	-				+0.9
5,586,753	-				+0.1
5,586,798	-				+0.5
5,586,808	+				+0.2
5,586,808	+				+0.0
5,586,809	-				+2.6
5,586,809	-				+1.2
5,586,809	-				-0.5
5,586,809	-				+0.5
5,586,809	-				-1.2
5,586,809	-				+0.5
5,586,882	+				+0.1
5,586,883	-				-0.8
5,586,963	-		Pf6N2E2_4834	0.14	-0.2
5,586,963	-		Pf6N2E2_4834	0.14	-0.1
5,587,104	-		Pf6N2E2_4834	0.28	+0.3
5,587,114	+		Pf6N2E2_4834	0.29	+0.8
5,587,114	+		Pf6N2E2_4834	0.29	+1.0
5,587,115	-		Pf6N2E2_4834	0.29	+0.1
5,587,115	-		Pf6N2E2_4834	0.29	-0.1
5,587,115	-		Pf6N2E2_4834	0.29	-1.0
5,587,115	-		Pf6N2E2_4834	0.29	-0.2
5,587,157	-		Pf6N2E2_4834	0.34	-0.3
5,587,157	-		Pf6N2E2_4834	0.34	+0.0
5,587,157	-		Pf6N2E2_4834	0.34	-1.1
5,587,157	-		Pf6N2E2_4834	0.34	+0.2
5,587,157	-		Pf6N2E2_4834	0.34	-0.3
5,587,158	+		Pf6N2E2_4834	0.34	+0.0
5,587,158	+		Pf6N2E2_4834	0.34	-0.1
5,587,158	+		Pf6N2E2_4834	0.34	-1.4
5,587,159	-		Pf6N2E2_4834	0.34	+1.0
5,587,210	-		Pf6N2E2_4834	0.39	-0.1
5,587,210	-		Pf6N2E2_4834	0.39	+0.2
5,587,210	-		Pf6N2E2_4834	0.39	+0.7
5,587,280	+		Pf6N2E2_4834	0.46	+0.8
5,587,280	+		Pf6N2E2_4834	0.46	-2.6
5,587,281	-		Pf6N2E2_4834	0.47	-0.4
5,587,281	-		Pf6N2E2_4834	0.47	-0.2
5,587,281	-		Pf6N2E2_4834	0.47	-0.3
5,587,281	-		Pf6N2E2_4834	0.47	-1.1
5,587,281	-		Pf6N2E2_4834	0.47	+1.4
5,587,289	-		Pf6N2E2_4834	0.47	-0.4
5,587,449	+		Pf6N2E2_4834	0.64	+0.1
5,587,449	+		Pf6N2E2_4834	0.64	-0.2
5,587,450	-		Pf6N2E2_4834	0.64	-1.0
5,587,466	+		Pf6N2E2_4834	0.66	+0.7
5,587,466	+		Pf6N2E2_4834	0.66	-0.5
5,587,466	+		Pf6N2E2_4834	0.66	+0.3
5,587,466	+		Pf6N2E2_4834	0.66	-2.6
5,587,466	+		Pf6N2E2_4834	0.66	-0.5
5,587,466	+		Pf6N2E2_4834	0.66	+0.8
5,587,466	+		Pf6N2E2_4834	0.66	-1.0
5,587,466	+		Pf6N2E2_4834	0.66	-0.6
5,587,466	+		Pf6N2E2_4834	0.66	-0.4
5,587,467	-		Pf6N2E2_4834	0.66	-1.1
5,587,467	-		Pf6N2E2_4834	0.66	+0.5
5,587,467	-		Pf6N2E2_4834	0.66	-1.2
5,587,467	-		Pf6N2E2_4834	0.66	-0.7
5,587,467	-		Pf6N2E2_4834	0.66	-0.4
5,587,467	-		Pf6N2E2_4834	0.66	-0.3
5,587,509	-		Pf6N2E2_4834	0.70	-0.5
5,587,584	+		Pf6N2E2_4834	0.78	-1.9
5,587,584	+		Pf6N2E2_4834	0.78	-0.7
5,587,585	-		Pf6N2E2_4834	0.78	-0.2
5,587,585	-		Pf6N2E2_4834	0.78	+0.3
5,587,585	-		Pf6N2E2_4834	0.78	-0.2
5,587,697	-		Pf6N2E2_4834	0.89	+0.6
5,587,805	+				-0.3
5,587,806	-				+0.2
5,587,814	+				-0.6
5,587,835	+				-1.7
5,587,835	+				-0.3
5,587,835	+				-0.5
5,587,836	-				-0.0
5,587,836	-				+0.9
5,588,300	-				+0.6
5,588,300	-				-2.0
5,588,302	+				+1.0
5,588,309	+				-2.6
5,588,309	+				-0.3
5,588,309	+				+0.0
5,588,309	+				-0.7
5,588,309	+				-2.0
5,588,310	-				-0.3
5,588,310	-				+0.6
5,588,400	+				+0.5
5,588,400	+				-0.0
5,588,400	+				+1.0
5,588,400	+				-0.7
5,588,415	+				+0.7
5,588,434	+				+0.9
5,588,536	+		Pf6N2E2_4836	0.13	-0.0
5,588,536	+		Pf6N2E2_4836	0.13	+0.1
5,588,557	+		Pf6N2E2_4836	0.15	-0.1
5,588,558	-		Pf6N2E2_4836	0.15	+0.5
5,588,558	-		Pf6N2E2_4836	0.15	-0.1
5,588,740	+		Pf6N2E2_4836	0.33	+0.2
5,588,741	-		Pf6N2E2_4836	0.33	-0.0
5,588,741	-		Pf6N2E2_4836	0.33	+1.2