Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4631

Experiment: sodium carbonate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium carbonate 0.0125 M
5,358,344	+				-0.2
5,358,344	+				-0.9
5,358,344	+				+0.4
5,358,345	-				+0.1
5,358,353	+				+1.2
5,358,397	+				+0.2
5,359,039	+		Pf6N2E2_4630	0.89	+0.7
5,359,039	+		Pf6N2E2_4630	0.89	+0.6
5,359,040	-		Pf6N2E2_4630	0.89	-0.5
5,359,040	-		Pf6N2E2_4630	0.89	+1.0
5,359,040	-		Pf6N2E2_4630	0.89	+1.4
5,359,040	-		Pf6N2E2_4630	0.89	-0.4
5,359,144	+				+1.2
5,359,144	+				+0.6
5,359,144	+				-1.1
5,359,144	+				-1.3
5,359,144	+				+0.5
5,359,145	-				-1.1
5,359,145	-				-0.2
5,359,177	+				-0.3
5,359,178	-				+0.1
5,359,208	+				-0.8
5,359,208	+				-0.5
5,359,208	+				+0.4
5,359,208	+				-0.3
5,359,208	+				-0.9
5,359,209	-				-0.3
5,359,209	-				+0.5
5,359,209	-				-0.3
5,359,278	+				+1.0
5,359,278	+				+0.8
5,359,279	-				-0.3
5,359,452	+				-0.2
5,359,453	-				+0.1
5,359,453	-				-0.4
5,359,467	+		Pf6N2E2_4631	0.10	-2.0
5,359,467	+		Pf6N2E2_4631	0.10	-0.7
5,359,467	+		Pf6N2E2_4631	0.10	-0.7
5,359,468	-		Pf6N2E2_4631	0.10	+0.3
5,359,468	-		Pf6N2E2_4631	0.10	-0.5
5,359,718	-		Pf6N2E2_4631	0.28	-1.3
5,359,718	-		Pf6N2E2_4631	0.28	-2.4
5,359,764	+		Pf6N2E2_4631	0.31	-1.0
5,359,764	+		Pf6N2E2_4631	0.31	-0.9
5,359,764	+		Pf6N2E2_4631	0.31	-0.6
5,359,764	+		Pf6N2E2_4631	0.31	-0.6
5,359,765	-		Pf6N2E2_4631	0.31	-2.5
5,359,765	-		Pf6N2E2_4631	0.31	-2.2
5,359,809	+		Pf6N2E2_4631	0.35	-0.3
5,359,809	+		Pf6N2E2_4631	0.35	-1.7
5,359,809	+		Pf6N2E2_4631	0.35	-0.5
5,359,821	+		Pf6N2E2_4631	0.35	-1.6
5,359,821	+		Pf6N2E2_4631	0.35	-1.7
5,359,986	+		Pf6N2E2_4631	0.47	-0.7
5,360,031	+		Pf6N2E2_4631	0.50	-1.3
5,360,031	+		Pf6N2E2_4631	0.50	-1.8
5,360,031	+		Pf6N2E2_4631	0.50	-0.3
5,360,032	-		Pf6N2E2_4631	0.50	-1.8
5,360,175	+		Pf6N2E2_4631	0.61	-0.3
5,360,176	-		Pf6N2E2_4631	0.61	-1.1
5,360,223	+		Pf6N2E2_4631	0.64	+0.3
5,360,223	+		Pf6N2E2_4631	0.64	-0.2
5,360,224	-		Pf6N2E2_4631	0.64	+0.1
5,360,224	-		Pf6N2E2_4631	0.64	-1.9
5,360,224	-		Pf6N2E2_4631	0.64	+1.8
5,360,224	-		Pf6N2E2_4631	0.64	-0.7
5,360,283	+		Pf6N2E2_4631	0.68	-0.0
5,360,283	+		Pf6N2E2_4631	0.68	-0.1
5,360,284	-		Pf6N2E2_4631	0.68	-0.3
5,360,341	-		Pf6N2E2_4631	0.72	-0.7
5,360,394	+		Pf6N2E2_4631	0.76	+1.2
5,360,583	+		Pf6N2E2_4631	0.90	+0.4
5,360,717	-				-0.8
5,360,785	+				+0.1
5,360,785	+				+0.2
5,360,785	+				+0.9
5,360,785	+				-1.0
5,360,785	+				+0.0
5,360,786	-				+0.4
5,360,786	-				+0.2
5,360,879	+				-0.8
5,360,879	+				-0.0
5,360,925	+				-0.0
5,360,926	-				+1.2
5,360,929	+				-0.1
5,360,929	+				-0.3
5,360,929	+				-0.5
5,360,929	+				+0.5
5,360,930	-				+0.7
5,360,930	-				-0.7
5,360,993	+				-0.4
5,360,994	-				-1.1
5,360,994	-				-1.0
5,361,082	+				+0.2
5,361,082	+				+1.6
5,361,083	-				+0.4
5,361,208	+		Pf6N2E2_4632	0.14	-1.5
5,361,208	+		Pf6N2E2_4632	0.14	-1.6
5,361,208	+		Pf6N2E2_4632	0.14	-0.3
5,361,208	+		Pf6N2E2_4632	0.14	-0.4
5,361,209	-		Pf6N2E2_4632	0.15	-0.6
5,361,209	-		Pf6N2E2_4632	0.15	+0.4
5,361,209	-		Pf6N2E2_4632	0.15	-0.6
5,361,209	-		Pf6N2E2_4632	0.15	+1.2
5,361,209	-		Pf6N2E2_4632	0.15	-0.1
5,361,209	-		Pf6N2E2_4632	0.15	+0.3
5,361,209	-		Pf6N2E2_4632	0.15	+0.0
5,361,209	-		Pf6N2E2_4632	0.15	+0.8
5,361,268	+		Pf6N2E2_4632	0.18	+0.9
5,361,268	+		Pf6N2E2_4632	0.18	+0.2
5,361,268	+		Pf6N2E2_4632	0.18	-0.4
5,361,269	-		Pf6N2E2_4632	0.18	+0.4
5,361,269	-		Pf6N2E2_4632	0.18	+0.2
5,361,269	-		Pf6N2E2_4632	0.18	+0.2
5,361,269	-		Pf6N2E2_4632	0.18	+0.2
5,361,269	-		Pf6N2E2_4632	0.18	+0.0
5,361,286	+		Pf6N2E2_4632	0.19	-1.0
5,361,286	+		Pf6N2E2_4632	0.19	-0.9
5,361,286	+		Pf6N2E2_4632	0.19	+1.5
5,361,286	+		Pf6N2E2_4632	0.19	+1.7
5,361,287	-		Pf6N2E2_4632	0.19	-1.6
5,361,287	-		Pf6N2E2_4632	0.19	+0.4
5,361,287	-		Pf6N2E2_4632	0.19	+1.8
5,361,287	-		Pf6N2E2_4632	0.19	+1.2
5,361,287	-		Pf6N2E2_4632	0.19	+0.1
5,361,287	-		Pf6N2E2_4632	0.19	+0.2
5,361,287	-		Pf6N2E2_4632	0.19	+0.6
5,361,287	-		Pf6N2E2_4632	0.19	+0.1
5,361,287	-		Pf6N2E2_4632	0.19	+0.8
5,361,287	-		Pf6N2E2_4632	0.19	-0.4
5,361,568	+		Pf6N2E2_4632	0.35	-0.2