Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_4

Experiment: sodium carbonate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium carbonate 0.0125 M
13,469	-				-1.4
13,492	+				+0.9
13,492	+				-0.1
13,525	+				-0.1
13,525	+				+0.5
13,525	+				+0.0
13,526	-				-0.8
13,526	-				+0.4
13,526	-				-0.3
13,597	+				-1.1
13,597	+				+0.6
13,597	+				-0.5
13,598	-				-0.7
13,651	+				+0.1
13,652	-				+1.3
13,753	+				-1.6
14,036	+				-1.2
14,045	-				-0.8
14,459	+				-0.4
14,460	-				+0.3
14,493	-				+0.7
14,613	+				+1.0
14,613	+				+0.8
14,613	+				-0.9
15,055	-				-0.1
15,057	+				-1.5
15,058	-				-0.9
15,111	+		Pf6N2E2_4	0.10	-2.1
15,524	-		Pf6N2E2_4	0.16	-0.1
15,765	+		Pf6N2E2_4	0.20	+1.8
15,766	-		Pf6N2E2_4	0.20	-0.7
15,766	-		Pf6N2E2_4	0.20	-1.2
15,766	-		Pf6N2E2_4	0.20	+0.3
15,766	-		Pf6N2E2_4	0.20	-0.5
15,766	-		Pf6N2E2_4	0.20	-1.4
15,801	+		Pf6N2E2_4	0.21	-0.3
15,802	-		Pf6N2E2_4	0.21	-0.7
15,802	-		Pf6N2E2_4	0.21	+0.6
15,896	+		Pf6N2E2_4	0.22	+0.2
15,955	-		Pf6N2E2_4	0.23	+0.3
16,216	-		Pf6N2E2_4	0.27	-0.2
16,216	-		Pf6N2E2_4	0.27	-0.7
16,236	+		Pf6N2E2_4	0.27	+0.8
16,437	+		Pf6N2E2_4	0.31	-1.1
16,437	+		Pf6N2E2_4	0.31	-0.8
16,438	-		Pf6N2E2_4	0.31	+0.0
16,478	-		Pf6N2E2_4	0.31	+0.2
16,628	-		Pf6N2E2_4	0.33	-0.4
16,951	-		Pf6N2E2_4	0.38	-0.2
17,154	+		Pf6N2E2_4	0.42	+0.7
17,154	+		Pf6N2E2_4	0.42	-1.2
17,154	+		Pf6N2E2_4	0.42	+0.7
17,396	-		Pf6N2E2_4	0.45	-0.2
17,404	-		Pf6N2E2_4	0.45	+0.9
17,404	-		Pf6N2E2_4	0.45	+0.5
17,404	-		Pf6N2E2_4	0.45	-0.4
17,440	+		Pf6N2E2_4	0.46	-0.0
17,441	-		Pf6N2E2_4	0.46	+0.3
17,514	+		Pf6N2E2_4	0.47	+0.1
17,954	-		Pf6N2E2_4	0.54	-0.1
18,291	+		Pf6N2E2_4	0.59	-1.1
18,300	+		Pf6N2E2_4	0.59	-0.0
18,300	+		Pf6N2E2_4	0.59	-0.2
18,301	-		Pf6N2E2_4	0.59	+0.5
18,301	-		Pf6N2E2_4	0.59	-0.1
18,565	-		Pf6N2E2_4	0.63	-0.5
18,794	+		Pf6N2E2_4	0.67	+0.8
18,978	+		Pf6N2E2_4	0.70	+0.3
19,193	-		Pf6N2E2_4	0.73	+0.6
19,392	+		Pf6N2E2_4	0.76	+2.4
19,392	+		Pf6N2E2_4	0.76	+0.5
19,392	+		Pf6N2E2_4	0.76	-0.3
19,392	+		Pf6N2E2_4	0.76	-0.4
19,392	+		Pf6N2E2_4	0.76	-0.8
19,393	-		Pf6N2E2_4	0.76	-1.2
19,393	-		Pf6N2E2_4	0.76	+0.5
19,434	+		Pf6N2E2_4	0.77	-0.3
19,434	+		Pf6N2E2_4	0.77	+0.5
19,434	+		Pf6N2E2_4	0.77	+0.3
19,435	-		Pf6N2E2_4	0.77	+0.3
19,552	-		Pf6N2E2_4	0.78	+0.6
19,605	+		Pf6N2E2_4	0.79	+1.1
19,605	+		Pf6N2E2_4	0.79	-0.1
19,605	+		Pf6N2E2_4	0.79	+0.2
19,606	-		Pf6N2E2_4	0.79	+0.4
19,606	-		Pf6N2E2_4	0.79	-1.0
19,614	+		Pf6N2E2_4	0.79	-1.3
19,614	+		Pf6N2E2_4	0.79	+0.7
19,615	-		Pf6N2E2_4	0.79	+0.7
20,028	+		Pf6N2E2_4	0.86	-0.9
20,028	+		Pf6N2E2_4	0.86	-0.2
20,029	-		Pf6N2E2_4	0.86	+0.3
20,029	-		Pf6N2E2_4	0.86	+0.1
20,038	-		Pf6N2E2_4	0.86	+0.5
20,139	+		Pf6N2E2_4	0.87	+0.9
20,139	+		Pf6N2E2_4	0.87	+0.3
20,139	+		Pf6N2E2_4	0.87	-0.1
20,140	-		Pf6N2E2_4	0.87	+0.2
20,140	-		Pf6N2E2_4	0.87	+0.8
20,140	-		Pf6N2E2_4	0.87	-2.5
20,140	-		Pf6N2E2_4	0.87	-1.3
20,140	-		Pf6N2E2_4	0.87	-0.5
20,193	+		Pf6N2E2_4	0.88	-0.1
20,194	-		Pf6N2E2_4	0.88	+0.2
20,479	-				+1.6
20,479	-				+0.0
20,581	-				-0.5
20,581	-				-0.4
20,581	-				+0.2
20,581	-				-1.7
20,581	-				+0.3
20,692	+				+0.4
20,692	+				-1.1
20,693	-				+1.3
21,210	+				+0.5
21,417	-				-0.1
21,536	+				-0.7