Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_1560

Experiment: sodium carbonate 0.0125 M

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	sodium carbonate 0.0125 M
1,820,954	+		Pf6N2E2_1559	0.42	-0.9
1,820,955	-		Pf6N2E2_1559	0.42	-0.1
1,820,955	-		Pf6N2E2_1559	0.42	-0.1
1,821,062	-		Pf6N2E2_1559	0.51	+1.1
1,821,062	-		Pf6N2E2_1559	0.51	+1.0
1,821,073	+		Pf6N2E2_1559	0.52	+1.6
1,821,172	+		Pf6N2E2_1559	0.60	-0.3
1,821,244	+		Pf6N2E2_1559	0.65	-0.3
1,821,244	+		Pf6N2E2_1559	0.65	+0.1
1,821,391	+		Pf6N2E2_1559	0.77	+0.7
1,821,391	+		Pf6N2E2_1559	0.77	-0.5
1,821,391	+		Pf6N2E2_1559	0.77	+1.0
1,821,392	-		Pf6N2E2_1559	0.77	+0.3
1,821,437	+		Pf6N2E2_1559	0.80	+0.3
1,821,439	+		Pf6N2E2_1559	0.81	+0.5
1,821,439	+		Pf6N2E2_1559	0.81	-1.4
1,821,439	+		Pf6N2E2_1559	0.81	-0.1
1,821,439	+		Pf6N2E2_1559	0.81	+1.4
1,821,439	+		Pf6N2E2_1559	0.81	+0.5
1,821,440	-		Pf6N2E2_1559	0.81	+0.4
1,821,703	-				+1.4
1,821,715	+				-1.8
1,821,716	-				+1.1
1,821,716	-				+0.1
1,821,716	-				-0.0
1,821,716	-				-0.3
1,821,716	-				-0.0
1,821,716	-				+0.1
1,821,716	-				+0.0
1,821,716	-				-0.5
1,821,716	-				+0.1
1,821,764	+				-1.9
1,821,764	+				+0.7
1,821,765	-				+1.8
1,821,778	+				-0.1
1,821,779	-				+0.3
1,821,813	+				-0.1
1,821,813	+				-1.3
1,821,813	+				-0.9
1,821,813	+				+0.9
1,821,813	+				+0.9
1,821,813	+				+0.1
1,821,814	-				+1.1
1,821,814	-				+0.1
1,821,814	-				-0.1
1,821,903	-				-0.3
1,821,903	-				+0.3
1,822,028	-		Pf6N2E2_1560	0.19	-0.5
1,822,373	+		Pf6N2E2_1560	0.57	-1.5
1,822,373	+		Pf6N2E2_1560	0.57	-1.1
1,822,558	+		Pf6N2E2_1560	0.77	-0.2
1,822,558	+		Pf6N2E2_1560	0.77	-0.8
1,822,703	+				+0.3
1,822,730	+				-0.5
1,822,795	-				-0.5
1,822,799	+				+0.0
1,822,799	+				+0.1
1,822,886	+				+0.1
1,822,887	-				-0.0
1,822,887	-				-0.1
1,823,027	+		Pf6N2E2_1561	0.25	+0.6
1,823,027	+		Pf6N2E2_1561	0.25	-1.9
1,823,027	+		Pf6N2E2_1561	0.25	+1.1
1,823,090	+		Pf6N2E2_1561	0.35	-0.4
1,823,179	+		Pf6N2E2_1561	0.50	+0.2
1,823,180	-		Pf6N2E2_1561	0.51	+1.1
1,823,225	-		Pf6N2E2_1561	0.58	-0.4
1,823,279	+		Pf6N2E2_1561	0.67	-1.2
1,823,279	+		Pf6N2E2_1561	0.67	-0.9
1,823,280	-		Pf6N2E2_1561	0.67	+0.3
1,823,342	+		Pf6N2E2_1561	0.78	+0.2
1,823,342	+		Pf6N2E2_1561	0.78	-0.9
1,823,342	+		Pf6N2E2_1561	0.78	+1.1
1,823,342	+		Pf6N2E2_1561	0.78	-0.7
1,823,343	-		Pf6N2E2_1561	0.78	+0.3
1,823,343	-		Pf6N2E2_1561	0.78	-0.1
1,823,343	-		Pf6N2E2_1561	0.78	+2.1
1,823,343	-		Pf6N2E2_1561	0.78	-0.5
1,823,475	-				-0.3
1,823,650	+				+0.2
1,823,651	-				+1.7
1,823,651	-				-0.0
1,823,666	+				+0.3