Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21160

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
4,755,452	+		PFLU_RS21155	0.17	+0.2
4,755,452	+		PFLU_RS21155	0.17	+2.2
4,755,452	+		PFLU_RS21155	0.17	+1.8
4,755,452	+		PFLU_RS21155	0.17	-2.5
4,755,452	+		PFLU_RS21155	0.17	-0.3
4,755,452	+		PFLU_RS21155	0.17	-1.2
4,755,453	-		PFLU_RS21155	0.17	-0.2
4,755,453	-		PFLU_RS21155	0.17	-0.2
4,755,453	-		PFLU_RS21155	0.17	-1.2
4,755,453	-		PFLU_RS21155	0.17	+1.1
4,755,453	-		PFLU_RS21155	0.17	+0.1
4,755,453	-		PFLU_RS21155	0.17	+1.3
4,755,538	+		PFLU_RS21155	0.26	+1.8
4,755,538	+		PFLU_RS21155	0.26	+1.5
4,755,538	+		PFLU_RS21155	0.26	+1.8
4,755,539	-		PFLU_RS21155	0.26	+2.6
4,755,539	-		PFLU_RS21155	0.26	+1.0
4,755,539	-		PFLU_RS21155	0.26	+0.6
4,755,611	+		PFLU_RS21155	0.34	-3.2
4,755,638	+		PFLU_RS21155	0.36	-0.2
4,755,638	+		PFLU_RS21155	0.36	+2.6
4,755,638	+		PFLU_RS21155	0.36	+0.2
4,755,638	+		PFLU_RS21155	0.36	-0.6
4,755,638	+		PFLU_RS21155	0.36	+1.6
4,755,638	+		PFLU_RS21155	0.36	+0.9
4,755,638	+		PFLU_RS21155	0.36	-1.0
4,755,638	+		PFLU_RS21155	0.36	+0.2
4,755,638	+		PFLU_RS21155	0.36	+0.5
4,755,638	+		PFLU_RS21155	0.36	-0.0
4,755,638	+		PFLU_RS21155	0.36	-1.0
4,755,638	+		PFLU_RS21155	0.36	+1.0
4,755,638	+		PFLU_RS21155	0.36	+0.4
4,755,638	+		PFLU_RS21155	0.36	-3.7
4,755,638	+		PFLU_RS21155	0.36	+0.2
4,755,639	-		PFLU_RS21155	0.37	-0.8
4,755,639	-		PFLU_RS21155	0.37	+0.5
4,755,639	-		PFLU_RS21155	0.37	-1.2
4,755,639	-		PFLU_RS21155	0.37	-1.7
4,755,639	-		PFLU_RS21155	0.37	+1.8
4,755,639	-		PFLU_RS21155	0.37	-0.5
4,755,639	-		PFLU_RS21155	0.37	-1.0
4,755,639	-		PFLU_RS21155	0.37	+3.4
4,755,639	-		PFLU_RS21155	0.37	-0.5
4,755,639	-		PFLU_RS21155	0.37	-1.0
4,755,639	-		PFLU_RS21155	0.37	-0.4
4,755,668	+		PFLU_RS21155	0.40	-1.0
4,755,668	+		PFLU_RS21155	0.40	+1.5
4,755,668	+		PFLU_RS21155	0.40	+1.3
4,755,668	+		PFLU_RS21155	0.40	+2.8
4,755,668	+		PFLU_RS21155	0.40	-0.0
4,755,668	+		PFLU_RS21155	0.40	-1.0
4,755,668	+		PFLU_RS21155	0.40	-3.0
4,755,668	+		PFLU_RS21155	0.40	-1.2
4,755,668	+		PFLU_RS21155	0.40	+2.3
4,755,669	-		PFLU_RS21155	0.40	-0.5
4,755,669	-		PFLU_RS21155	0.40	-1.4
4,755,669	-		PFLU_RS21155	0.40	-2.2
4,755,669	-		PFLU_RS21155	0.40	+0.8
4,755,669	-		PFLU_RS21155	0.40	-0.8
4,755,669	-		PFLU_RS21155	0.40	-0.6
4,755,669	-		PFLU_RS21155	0.40	+1.0
4,755,669	-		PFLU_RS21155	0.40	-2.4
4,755,669	-		PFLU_RS21155	0.40	+0.2
4,755,669	-		PFLU_RS21155	0.40	-1.2
4,755,669	-		PFLU_RS21155	0.40	-1.8
4,755,669	-		PFLU_RS21155	0.40	-0.2
4,755,723	+		PFLU_RS21155	0.45	-1.7
4,755,723	+		PFLU_RS21155	0.45	-1.2
4,755,724	-		PFLU_RS21155	0.46	+0.2
4,755,724	-		PFLU_RS21155	0.46	-1.5
4,755,756	-		PFLU_RS21155	0.49	+1.9
4,755,827	+		PFLU_RS21155	0.56	-2.4
4,755,827	+		PFLU_RS21155	0.56	-1.5
4,755,827	+		PFLU_RS21155	0.56	+0.2
4,755,828	-		PFLU_RS21155	0.57	+2.2
4,755,828	-		PFLU_RS21155	0.57	-1.7
4,755,828	-		PFLU_RS21155	0.57	-1.2
4,755,828	-		PFLU_RS21155	0.57	-1.4
4,755,828	-		PFLU_RS21155	0.57	-0.5
4,755,899	+		PFLU_RS21155	0.64	-0.8
4,755,899	+		PFLU_RS21155	0.64	-1.0
4,755,899	+		PFLU_RS21155	0.64	+1.8
4,755,899	+		PFLU_RS21155	0.64	+1.3
4,755,899	+		PFLU_RS21155	0.64	-0.5
4,755,899	+		PFLU_RS21155	0.64	-1.9
4,755,899	+		PFLU_RS21155	0.64	-0.2
4,755,899	+		PFLU_RS21155	0.64	-0.2
4,755,900	-		PFLU_RS21155	0.64	-0.1
4,755,900	-		PFLU_RS21155	0.64	+1.0
4,755,900	-		PFLU_RS21155	0.64	+4.8
4,755,900	-		PFLU_RS21155	0.64	+2.4
4,755,980	+		PFLU_RS21155	0.73	-0.2
4,756,002	-		PFLU_RS21155	0.75	+1.8
4,756,011	+		PFLU_RS21155	0.76	+1.7
4,756,011	+		PFLU_RS21155	0.76	-1.0
4,756,012	-		PFLU_RS21155	0.76	-0.2
4,756,012	-		PFLU_RS21155	0.76	+2.0
4,756,181	+				+0.2
4,756,181	+				-0.8
4,756,181	+				-2.1
4,756,181	+				+0.3
4,756,182	-				-0.5
4,756,182	-				-0.4
4,756,182	-				+1.1
4,756,182	-				-0.8
4,756,182	-				-0.2
4,756,203	+				-2.0
4,756,203	+				-1.4
4,756,203	+				-0.3
4,756,203	+				+0.8
4,756,203	+				-0.5
4,756,203	+				+0.3
4,756,203	+				-2.2
4,756,203	+				+0.8
4,756,203	+				-1.0
4,756,203	+				-0.5
4,756,204	-				-1.4
4,756,204	-				-0.8
4,756,204	-				-1.2
4,756,204	-				+0.4
4,756,204	-				+0.2
4,756,204	-				-0.7
4,756,204	-				+0.3
4,756,204	-				-0.4
4,756,204	-				-1.7
4,756,204	-				+0.3
4,756,204	-				-1.2
4,756,205	+				-1.5
4,756,205	+				+0.2
4,756,205	+				-0.1
4,756,205	+				+0.9
4,756,205	+				-2.1
4,756,205	+				+0.2
4,756,205	+				-0.2
4,756,205	+				+0.9
4,756,205	+				+2.8
4,756,205	+				-1.1
4,756,205	+				-2.4
4,756,205	+				+1.8
4,756,205	+				-2.3
4,756,205	+				-0.5
4,756,206	-				+0.8
4,756,206	-				+1.1
4,756,206	-				-2.2
4,756,206	-				-1.3
4,756,206	-				-0.7
4,756,206	-				-1.0
4,756,206	-				-1.2
4,756,206	-				-1.0
4,756,206	-				+1.5
4,756,206	-				+0.0
4,756,206	-				+1.8
4,756,206	-				+3.1
4,756,265	+				+2.6
4,756,265	+				+3.2
4,756,266	-				-3.0
4,756,301	+				-2.6
4,756,341	+				-1.2
4,756,341	+				+0.0
4,756,341	+				+1.3
4,756,341	+				+0.5
4,756,342	-				+0.4
4,756,405	+				+1.7
4,756,405	+				-1.7
4,756,405	+				+1.6
4,756,405	+				-1.8
4,756,405	+				-2.2
4,756,405	+				-0.2
4,756,405	+				-0.8
4,756,406	-				-1.9
4,756,406	-				-1.4
4,756,406	-				+0.4
4,756,406	-				-2.2
4,756,406	-				-2.2
4,756,406	-				+0.2
4,756,491	+		PFLU_RS21160	0.23	-0.0
4,756,491	+		PFLU_RS21160	0.23	-1.8
4,756,491	+		PFLU_RS21160	0.23	+0.1
4,756,491	+		PFLU_RS21160	0.23	-2.1
4,756,491	+		PFLU_RS21160	0.23	-1.2
4,756,491	+		PFLU_RS21160	0.23	+0.9
4,756,491	+		PFLU_RS21160	0.23	-1.6
4,756,491	+		PFLU_RS21160	0.23	-1.1
4,756,491	+		PFLU_RS21160	0.23	+0.9
4,756,491	+		PFLU_RS21160	0.23	-0.9
4,756,491	+		PFLU_RS21160	0.23	+0.2
4,756,491	+		PFLU_RS21160	0.23	+0.8
4,756,491	+		PFLU_RS21160	0.23	+1.0
4,756,491	+		PFLU_RS21160	0.23	-1.9
4,756,491	+		PFLU_RS21160	0.23	-3.3
4,756,491	+		PFLU_RS21160	0.23	+1.0
4,756,492	-		PFLU_RS21160	0.23	+0.6
4,756,492	-		PFLU_RS21160	0.23	-0.2
4,756,492	-		PFLU_RS21160	0.23	+0.5
4,756,492	-		PFLU_RS21160	0.23	-1.8
4,756,492	-		PFLU_RS21160	0.23	+1.8
4,756,492	-		PFLU_RS21160	0.23	-0.0
4,756,492	-		PFLU_RS21160	0.23	+0.8
4,756,492	-		PFLU_RS21160	0.23	-0.8
4,756,492	-		PFLU_RS21160	0.23	-1.2
4,756,492	-		PFLU_RS21160	0.23	-0.5
4,756,495	+		PFLU_RS21160	0.24	-0.2
4,756,495	+		PFLU_RS21160	0.24	+1.0
4,756,495	+		PFLU_RS21160	0.24	-1.8
4,756,495	+		PFLU_RS21160	0.24	+0.2
4,756,495	+		PFLU_RS21160	0.24	+0.9
4,756,496	-		PFLU_RS21160	0.24	-2.0
4,756,496	-		PFLU_RS21160	0.24	-0.4
4,756,496	-		PFLU_RS21160	0.24	-1.7
4,756,496	-		PFLU_RS21160	0.24	-0.7
4,756,496	-		PFLU_RS21160	0.24	-1.6
4,756,496	-		PFLU_RS21160	0.24	-2.2
4,756,496	-		PFLU_RS21160	0.24	-2.9
4,756,545	+		PFLU_RS21160	0.41	+1.8
4,756,545	+		PFLU_RS21160	0.41	+0.2
4,756,545	+		PFLU_RS21160	0.41	-1.3
4,756,545	+		PFLU_RS21160	0.41	-2.3
4,756,546	-		PFLU_RS21160	0.41	-1.7
4,756,639	+		PFLU_RS21160	0.73	-2.5
4,756,639	+		PFLU_RS21160	0.73	-2.3
4,756,639	+		PFLU_RS21160	0.73	-1.2
4,756,640	-		PFLU_RS21160	0.73	-2.8
4,756,640	-		PFLU_RS21160	0.73	-0.5
4,756,640	-		PFLU_RS21160	0.73	-0.1
4,756,640	-		PFLU_RS21160	0.73	+0.8
4,756,640	-		PFLU_RS21160	0.73	-0.5
4,756,640	-		PFLU_RS21160	0.73	-1.1
4,756,640	-		PFLU_RS21160	0.73	-0.4
4,756,699	+				-0.2
4,756,725	+				-3.1
4,756,725	+				-1.4
4,756,725	+				+0.6
4,756,725	+				-0.7
4,756,725	+				-2.4
4,756,725	+				-0.2
4,756,726	-				-0.8
4,756,726	-				-1.0
4,756,726	-				+0.8
4,756,726	-				+0.2
4,756,896	+		PFLU_RS21165	0.33	-2.2
4,756,896	+		PFLU_RS21165	0.33	+0.9
4,756,896	+		PFLU_RS21165	0.33	-0.3
4,756,896	+		PFLU_RS21165	0.33	-2.0
4,756,896	+		PFLU_RS21165	0.33	-0.8
4,756,896	+		PFLU_RS21165	0.33	-1.2
4,756,896	+		PFLU_RS21165	0.33	+0.1
4,756,897	-		PFLU_RS21165	0.33	+2.5
4,756,897	-		PFLU_RS21165	0.33	+0.8
4,756,897	-		PFLU_RS21165	0.33	-2.1
4,756,897	-		PFLU_RS21165	0.33	-3.1
4,756,944	+		PFLU_RS21165	0.42	-2.0
4,756,944	+		PFLU_RS21165	0.42	+0.8
4,756,945	-		PFLU_RS21165	0.43	+0.0
4,756,945	-		PFLU_RS21165	0.43	+0.2
4,756,945	-		PFLU_RS21165	0.43	+3.2
4,756,945	-		PFLU_RS21165	0.43	-0.5
4,756,945	-		PFLU_RS21165	0.43	-1.7
4,756,945	-		PFLU_RS21165	0.43	+0.4
4,756,945	-		PFLU_RS21165	0.43	-1.7
4,756,945	-		PFLU_RS21165	0.43	-0.9
4,757,019	+		PFLU_RS21165	0.57	-1.5
4,757,020	-		PFLU_RS21165	0.57	+0.5
4,757,020	-		PFLU_RS21165	0.57	+1.4
4,757,020	-		PFLU_RS21165	0.57	-2.7
4,757,100	+		PFLU_RS21165	0.72	+0.8
4,757,100	+		PFLU_RS21165	0.72	+0.2
4,757,100	+		PFLU_RS21165	0.72	+0.5
4,757,100	+		PFLU_RS21165	0.72	+0.3
4,757,100	+		PFLU_RS21165	0.72	-1.8
4,757,100	+		PFLU_RS21165	0.72	-0.1
4,757,100	+		PFLU_RS21165	0.72	+0.5
4,757,100	+		PFLU_RS21165	0.72	-0.0
4,757,100	+		PFLU_RS21165	0.72	-1.7
4,757,100	+		PFLU_RS21165	0.72	-0.5
4,757,100	+		PFLU_RS21165	0.72	+0.9
4,757,100	+		PFLU_RS21165	0.72	-1.0
4,757,100	+		PFLU_RS21165	0.72	+1.2
4,757,100	+		PFLU_RS21165	0.72	-0.5
4,757,100	+		PFLU_RS21165	0.72	-0.8
4,757,100	+		PFLU_RS21165	0.72	-2.6
4,757,100	+		PFLU_RS21165	0.72	+0.8
4,757,100	+		PFLU_RS21165	0.72	-1.4
4,757,100	+		PFLU_RS21165	0.72	-1.5
4,757,100	+		PFLU_RS21165	0.72	-1.0
4,757,100	+		PFLU_RS21165	0.72	+0.2
4,757,100	+		PFLU_RS21165	0.72	-1.0
4,757,100	+		PFLU_RS21165	0.72	-0.5
4,757,101	-		PFLU_RS21165	0.73	-0.5
4,757,101	-		PFLU_RS21165	0.73	+0.8
4,757,101	-		PFLU_RS21165	0.73	-0.2
4,757,101	-		PFLU_RS21165	0.73	+2.5
4,757,101	-		PFLU_RS21165	0.73	-0.2
4,757,101	-		PFLU_RS21165	0.73	+1.8
4,757,101	-		PFLU_RS21165	0.73	+1.9
4,757,101	-		PFLU_RS21165	0.73	-1.0
4,757,101	-		PFLU_RS21165	0.73	-1.7
4,757,101	-		PFLU_RS21165	0.73	-2.5
4,757,101	-		PFLU_RS21165	0.73	-0.5
4,757,101	-		PFLU_RS21165	0.73	+0.8
4,757,101	-		PFLU_RS21165	0.73	+1.3
4,757,101	-		PFLU_RS21165	0.73	+1.2
4,757,101	-		PFLU_RS21165	0.73	-0.1
4,757,101	-		PFLU_RS21165	0.73	-0.2
4,757,101	-		PFLU_RS21165	0.73	+1.4
4,757,101	-		PFLU_RS21165	0.73	+1.2
4,757,101	-		PFLU_RS21165	0.73	-1.2
4,757,101	-		PFLU_RS21165	0.73	+0.3
4,757,101	-		PFLU_RS21165	0.73	-1.5
4,757,101	-		PFLU_RS21165	0.73	+1.2
4,757,101	-		PFLU_RS21165	0.73	+0.2
4,757,101	-		PFLU_RS21165	0.73	-0.4
4,757,101	-		PFLU_RS21165	0.73	+0.3
4,757,101	-		PFLU_RS21165	0.73	+1.7
4,757,102	+		PFLU_RS21165	0.73	-1.4
4,757,102	+		PFLU_RS21165	0.73	-2.4
4,757,103	-		PFLU_RS21165	0.73	-2.0
4,757,103	-		PFLU_RS21165	0.73	+0.8
4,757,103	-		PFLU_RS21165	0.73	+0.8
4,757,103	-		PFLU_RS21165	0.73	+1.3
4,757,111	-		PFLU_RS21165	0.75	+1.3
4,757,137	+		PFLU_RS21165	0.80	+0.1
4,757,138	-		PFLU_RS21165	0.80	+0.5
4,757,257	+				-0.8
4,757,258	-				+3.0
4,757,258	-				+1.1
4,757,269	+				+0.8
4,757,269	+				-2.2
4,757,269	+				-0.9
4,757,269	+				-0.2
4,757,269	+				-1.4
4,757,299	-				-0.9
4,757,330	+				+1.2
4,757,330	+				-2.0
4,757,330	+				-1.4
4,757,330	+				-0.7
4,757,330	+				-0.2
4,757,331	-				-1.0
4,757,331	-				+0.8
4,757,373	-				+1.7
4,757,373	-				+3.3
4,757,401	+				-1.0
4,757,401	+				-2.9
4,757,401	+				+2.3
4,757,402	-				+3.0
4,757,402	-				+2.6
4,757,490	+				+2.0
4,757,491	-				+0.8
4,757,491	-				-1.5
4,757,491	-				-0.7
4,757,702	-		PFLU_RS21170	0.19	-1.1