Strain Fitness in Dechlorosoma suillum PS around Dsui_3352

Experiment: ALP with nitrite 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with nitrite 0.3 mM
3,589,695	+				-0.6
3,589,810	+				+0.4
3,589,816	-		Dsui_3351	0.38	-1.2
3,589,865	+				+0.4
3,589,897	-				-1.2
3,589,940	+		Dsui_3351	0.47	-0.6
3,589,948	-		Dsui_3351	0.48	-2.8
3,589,948	-				-0.6
3,590,053	+				+0.4
3,590,075	-		Dsui_3351	0.57	+0.4
3,590,075	-		Dsui_3351	0.57	-1.2
3,590,103	+				-0.6
3,590,113	+				+0.4
3,590,148	+				-0.6
3,590,151	-				-1.2
3,590,181	-				+0.4
3,590,498	-		Dsui_3351	0.89	+0.4
3,590,523	-				+0.4
3,590,687	+				-1.9
3,590,720	+				-1.2
3,590,779	-		Dsui_3352	0.16	-0.6
3,590,781	+				-1.2
3,590,843	-				-0.6
3,590,849	-		Dsui_3352	0.27	-1.9
3,590,898	-		Dsui_3352	0.35	+0.4
3,590,949	+		Dsui_3352	0.42	-1.6
3,590,957	-		Dsui_3352	0.44	-1.6
3,590,972	+				+0.4
3,590,972	-				+0.4
3,590,992	+		Dsui_3352	0.49	-1.9
3,591,036	-				+0.4
3,591,048	+				+0.4
3,591,051	-				+0.4
3,591,115	-		Dsui_3352	0.68	-1.2
3,591,274	-				+0.4
3,591,290	+				-0.6
3,591,292	+				-1.2
3,591,316	-				-2.6
3,591,337	+				+0.4
3,591,416	+				-0.6
3,591,451	-				+0.4
3,591,521	+		Dsui_3353	0.11	-0.3
3,591,523	+		Dsui_3353	0.11	-0.1
3,591,536	-				-1.6
3,591,586	-		Dsui_3353	0.17	+0.4
3,591,587	+		Dsui_3353	0.18	+0.3
3,591,598	+		Dsui_3353	0.19	-0.0
3,591,604	+		Dsui_3353	0.19	-0.2
3,591,604	+		Dsui_3353	0.19	-0.1
3,591,612	+		Dsui_3353	0.20	-0.2
3,591,614	+		Dsui_3353	0.20	+0.0
3,591,627	-				+0.4
3,591,631	+		Dsui_3353	0.22	-0.4
3,591,636	+		Dsui_3353	0.23	+0.1
3,591,639	-		Dsui_3353	0.23	-1.2
3,591,648	+		Dsui_3353	0.24	-0.1
3,591,677	+		Dsui_3353	0.27	-0.2
3,591,736	-				-0.6
3,591,741	+		Dsui_3353	0.34	+0.4
3,591,741	+		Dsui_3353	0.34	-0.2
3,591,757	+		Dsui_3353	0.36	-0.2
3,591,757	+		Dsui_3353	0.36	-0.1
3,591,757	+		Dsui_3353	0.36	-0.2
3,591,764	-				+0.4
3,591,765	-				+0.4
3,591,765	-		Dsui_3353	0.36	-1.9
3,591,765	-				+0.4
3,591,790	-				+0.4
3,591,820	+		Dsui_3353	0.42	-0.8
3,591,830	+		Dsui_3353	0.43	+0.4
3,591,854	+		Dsui_3353	0.46	-0.8
3,591,854	-		Dsui_3353	0.46	-1.2
3,591,855	+		Dsui_3353	0.46	-1.2
3,591,863	-				+0.4
3,591,867	-				+0.4
3,591,873	+		Dsui_3353	0.48	-1.2
3,591,874	+		Dsui_3353	0.48	+0.4
3,591,874	+		Dsui_3353	0.48	+0.4
3,591,874	+		Dsui_3353	0.48	+2.0
3,591,874	+		Dsui_3353	0.48	+0.4
3,591,874	+		Dsui_3353	0.48	-1.6
3,591,880	+		Dsui_3353	0.49	-2.2
3,591,900	+		Dsui_3353	0.51	-0.6
3,591,933	-		Dsui_3353	0.54	+2.0
3,591,942	+		Dsui_3353	0.55	-0.6
3,591,952	+		Dsui_3353	0.56	+1.4
3,591,960	-				-1.9
3,591,965	+		Dsui_3353	0.58	-0.6
3,591,965	+		Dsui_3353	0.58	-0.0
3,591,989	+		Dsui_3353	0.60	+1.4
3,591,990	+		Dsui_3353	0.60	+0.4
3,591,990	+		Dsui_3353	0.60	-2.6
3,591,990	+		Dsui_3353	0.60	+1.0
3,592,009	+		Dsui_3353	0.62	+0.4
3,592,009	+		Dsui_3353	0.62	+0.4
3,592,009	+		Dsui_3353	0.62	+0.4
3,592,017	-				-1.2
3,592,033	+		Dsui_3353	0.65	-1.6
3,592,033	+		Dsui_3353	0.65	-1.4
3,592,033	+		Dsui_3353	0.65	+0.6
3,592,041	-				+0.4
3,592,041	-				+0.4
3,592,057	+		Dsui_3353	0.67	-1.2
3,592,075	+		Dsui_3353	0.69	-2.2
3,592,075	+		Dsui_3353	0.69	+2.0
3,592,075	+		Dsui_3353	0.69	-1.1
3,592,075	+		Dsui_3353	0.69	+0.4
3,592,085	+		Dsui_3353	0.70	-0.6
3,592,085	+		Dsui_3353	0.70	-0.1
3,592,085	+		Dsui_3353	0.70	-1.6
3,592,085	+		Dsui_3353	0.70	-0.6
3,592,085	+		Dsui_3353	0.70	-0.8
3,592,085	+		Dsui_3353	0.70	-0.0
3,592,090	+		Dsui_3353	0.71	-0.3
3,592,092	+		Dsui_3353	0.71	-0.0
3,592,092	+		Dsui_3353	0.71	+0.8
3,592,092	+		Dsui_3353	0.71	-0.4
3,592,092	+		Dsui_3353	0.71	-0.6
3,592,092	+		Dsui_3353	0.71	-1.6
3,592,092	+		Dsui_3353	0.71	-0.6
3,592,092	+		Dsui_3353	0.71	-1.8
3,592,092	+		Dsui_3353	0.71	+1.0
3,592,092	+		Dsui_3353	0.71	-0.6
3,592,092	+		Dsui_3353	0.71	-0.9
3,592,092	+		Dsui_3353	0.71	-2.4
3,592,092	+		Dsui_3353	0.71	-1.9
3,592,092	+		Dsui_3353	0.71	-1.0
3,592,100	-		Dsui_3353	0.72	-1.0
3,592,111	+		Dsui_3353	0.73	+0.6
3,592,112	+		Dsui_3353	0.73	-2.2
3,592,142	+		Dsui_3353	0.76	-2.4
3,592,147	+		Dsui_3353	0.77	-0.6
3,592,147	+		Dsui_3353	0.77	+0.8
3,592,147	+		Dsui_3353	0.77	-1.3
3,592,147	+		Dsui_3353	0.77	-0.6
3,592,147	+		Dsui_3353	0.77	-1.2
3,592,147	+		Dsui_3353	0.77	-0.9
3,592,147	+		Dsui_3353	0.77	-1.3
3,592,147	+		Dsui_3353	0.77	+0.4
3,592,147	+		Dsui_3353	0.77	-1.6
3,592,147	+		Dsui_3353	0.77	+0.4
3,592,147	+		Dsui_3353	0.77	-3.3
3,592,147	+		Dsui_3353	0.77	+0.4
3,592,147	+		Dsui_3353	0.77	-0.2
3,592,147	+		Dsui_3353	0.77	-2.0
3,592,147	+		Dsui_3353	0.77	-2.0
3,592,147	+		Dsui_3353	0.77	-1.2
3,592,147	+		Dsui_3353	0.77	+0.8
3,592,147	+		Dsui_3353	0.77	+0.4
3,592,147	+		Dsui_3353	0.77	-1.2
3,592,147	+		Dsui_3353	0.77	-1.6
3,592,147	+		Dsui_3353	0.77	-1.9
3,592,147	+		Dsui_3353	0.77	+0.4
3,592,155	+		Dsui_3353	0.78	-1.2
3,592,155	-		Dsui_3353	0.78	+0.6
3,592,157	+		Dsui_3353	0.78	-0.3
3,592,163	+		Dsui_3353	0.79	-0.0
3,592,175	+		Dsui_3353	0.80	-2.2
3,592,197	+		Dsui_3353	0.82	-2.6
3,592,197	+		Dsui_3353	0.82	-2.9
3,592,202	+		Dsui_3353	0.83	-1.4
3,592,207	+		Dsui_3353	0.83	-0.6
3,592,207	+		Dsui_3353	0.83	-0.6
3,592,207	+		Dsui_3353	0.83	-1.9
3,592,207	+		Dsui_3353	0.83	-0.9
3,592,207	+		Dsui_3353	0.83	-0.6
3,592,207	+		Dsui_3353	0.83	-0.6
3,592,214	+		Dsui_3353	0.84	-2.8
3,592,214	+		Dsui_3353	0.84	-1.2
3,592,215	-		Dsui_3353	0.84	+0.4
3,592,218	+		Dsui_3353	0.85	-1.2
3,592,219	+		Dsui_3353	0.85	-2.1
3,592,219	+		Dsui_3353	0.85	+0.4
3,592,219	+		Dsui_3353	0.85	-0.6
3,592,219	+		Dsui_3353	0.85	+0.4
3,592,222	+		Dsui_3353	0.85	-2.6
3,592,223	+		Dsui_3353	0.85	-0.6
3,592,223	+		Dsui_3353	0.85	-0.6
3,592,223	+		Dsui_3353	0.85	-0.8
3,592,223	+		Dsui_3353	0.85	+0.4
3,592,223	+		Dsui_3353	0.85	+1.4
3,592,223	+		Dsui_3353	0.85	-0.8
3,592,223	+		Dsui_3353	0.85	-2.8
3,592,223	+		Dsui_3353	0.85	-1.6
3,592,223	+		Dsui_3353	0.85	-3.5
3,592,223	+		Dsui_3353	0.85	-3.6
3,592,223	+		Dsui_3353	0.85	+0.4
3,592,223	+		Dsui_3353	0.85	-0.0
3,592,223	+		Dsui_3353	0.85	-1.7
3,592,223	+		Dsui_3353	0.85	-1.6
3,592,223	+		Dsui_3353	0.85	-1.8
3,592,223	+		Dsui_3353	0.85	-0.3
3,592,231	+		Dsui_3353	0.86	-2.6
3,592,231	+		Dsui_3353	0.86	+0.4
3,592,231	+		Dsui_3353	0.86	-1.9
3,592,231	+		Dsui_3353	0.86	-0.6
3,592,236	+		Dsui_3353	0.86	-1.9
3,592,236	+		Dsui_3353	0.86	-0.6
3,592,236	+		Dsui_3353	0.86	-1.6
3,592,236	+		Dsui_3353	0.86	-1.2
3,592,247	+		Dsui_3353	0.88	+0.4
3,592,256	+		Dsui_3353	0.89	-3.8
3,592,266	+		Dsui_3353	0.90	-2.2
3,592,266	+		Dsui_3353	0.90	-0.1
3,592,266	+		Dsui_3353	0.90	-0.6
3,592,267	+		Dsui_3353	0.90	-1.2
3,592,274	+				+1.7
3,592,274	+				-1.2
3,592,274	+				-0.2
3,592,274	+				-1.8
3,592,274	+				-1.2
3,592,274	+				-0.3
3,592,276	+				-0.2
3,592,276	+				-1.3
3,592,281	+				-0.6
3,592,281	+				-0.0
3,592,281	+				-0.5
3,592,287	+				-1.5
3,592,289	+				+0.4
3,592,289	+				-0.6
3,592,289	+				-1.5
3,592,289	+				-0.6
3,592,289	+				-0.8
3,592,289	+				-0.5
3,592,289	+				-0.2
3,592,289	+				-0.2
3,592,289	+				-0.6
3,592,289	+				-1.2
3,592,289	+				-1.1
3,592,289	+				-1.3
3,592,289	+				-1.2
3,592,289	+				-0.6
3,592,289	+				-0.9
3,592,289	+				-1.2
3,592,289	+				+0.4
3,592,289	+				-1.2
3,592,289	+				-0.3
3,592,289	+				-1.3
3,592,289	+				-0.2
3,592,289	+				-0.7
3,592,289	+				-1.6
3,592,289	+				-1.6
3,592,289	+				-1.6
3,592,289	+				-3.5
3,592,289	+				-1.6
3,592,289	+				-0.6
3,592,289	+				-1.2
3,592,289	+				+1.6
3,592,289	+				+1.4
3,592,289	+				-1.1
3,592,289	+				-1.7
3,592,289	+				-0.4
3,592,289	+				-0.8
3,592,289	+				-0.0
3,592,289	+				-1.6
3,592,289	+				-2.2
3,592,289	+				-0.6
3,592,289	+				+0.3
3,592,289	+				-0.5
3,592,289	+				-3.0
3,592,289	+				-0.1
3,592,289	+				-0.9
3,592,289	+				-0.4
3,592,289	+				-1.0
3,592,289	+				+0.2
3,592,290	+				-1.2
3,592,294	+				-0.0
3,592,312	+				-1.6
3,592,312	+				-0.4
3,592,312	+				-1.0
3,592,312	+				-0.9
3,592,312	+				-1.3
3,592,312	+				+0.0
3,592,312	+				+0.1
3,592,312	+				-0.0
3,592,312	+				+0.1
3,592,312	+				-1.0
3,592,312	+				-1.2
3,592,312	+				+0.4
3,592,312	+				-0.6
3,592,312	+				+0.4
3,592,312	+				-0.5
3,592,312	+				-0.6
3,592,312	+				-0.1
3,592,312	+				-0.6
3,592,312	+				+0.4
3,592,312	+				-0.4
3,592,312	+				-0.6
3,592,312	+				-0.4
3,592,312	+				-0.2
3,592,312	+				-0.2
3,592,312	+				+0.6
3,592,312	+				+0.1
3,592,312	+				-1.9
3,592,312	+				-1.0
3,592,312	+				-1.6
3,592,312	+				+0.4
3,592,312	+				-1.7
3,592,318	+				-1.2
3,592,318	+				-0.9
3,592,320	+				-2.5
3,592,320	-				+0.4
3,592,321	+				-0.4
3,592,322	+				-1.6
3,592,322	+				-1.2
3,592,327	+				-0.4
3,592,327	+				-1.2
3,592,327	+				-0.7
3,592,327	+				-0.6
3,592,327	+				+0.0