Strain Fitness in Dechlorosoma suillum PS around Dsui_1135

Experiment: ALP with nitrite 0.3 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with nitrite 0.3 mM
1,187,826	-		Dsui_1134	0.57	-1.2
1,187,869	-		Dsui_1134	0.60	-1.9
1,187,978	+		Dsui_1134	0.68	-1.0
1,187,978	+		Dsui_1134	0.68	+0.2
1,188,014	+		Dsui_1134	0.71	+0.4
1,188,025	+		Dsui_1134	0.72	+0.2
1,188,028	-		Dsui_1134	0.72	+0.4
1,188,028	-		Dsui_1134	0.72	+0.4
1,188,033	-		Dsui_1134	0.72	-1.2
1,188,033	-		Dsui_1134	0.72	-0.6
1,188,035	+		Dsui_1134	0.73	-0.7
1,188,040	+		Dsui_1134	0.73	-2.4
1,188,055	-		Dsui_1134	0.74	+0.4
1,188,077	-		Dsui_1134	0.76	-0.6
1,188,130	+		Dsui_1134	0.80	+0.4
1,188,186	+		Dsui_1134	0.84	-0.7
1,188,244	+		Dsui_1134	0.88	-1.2
1,188,252	-		Dsui_1134	0.89	-1.2
1,188,254	+		Dsui_1134	0.89	-0.6
1,188,254	+		Dsui_1134	0.89	+3.0
1,188,261	+		Dsui_1134	0.90	-0.8
1,188,312	+				+0.4
1,188,380	+				+3.0
1,188,394	+				-1.6
1,188,402	-				+0.4
1,188,414	+				-1.6
1,188,414	+				-0.6
1,188,416	+				-0.6
1,188,427	-				+0.4
1,188,465	+				-0.2
1,188,473	+				-1.9
1,188,475	+				+0.4
1,188,489	+				+0.4
1,188,493	+				-2.2
1,188,493	+				+0.4
1,188,500	-				+0.4
1,188,500	-				+0.4
1,188,501	-				+0.4
1,188,502	-				-1.2
1,188,503	-				-0.6
1,188,507	-				+0.4
1,188,519	-				+0.4
1,188,531	+				-1.6
1,188,531	+				+0.4
1,188,539	-				+0.4
1,188,542	+				-1.2
1,188,542	+				-1.6
1,188,542	+				-0.6
1,188,542	+				-2.6
1,188,548	+				+0.4
1,188,548	+				-1.2
1,188,548	+				-1.7
1,188,555	+				-1.2
1,188,556	-				-2.2
1,188,556	-				+0.4
1,188,576	+				-1.2
1,188,576	+				-1.4
1,188,576	+				-2.2
1,188,576	+				+0.4
1,188,576	+				-1.2
1,188,576	+				+0.4
1,188,576	+				-0.6
1,188,579	+				+0.4
1,188,579	+				-1.6
1,188,579	+				-1.2
1,188,579	+				-1.2
1,188,579	+				-1.6
1,188,584	-				+0.4
1,188,584	-				-0.9
1,188,587	-				-1.2
1,188,587	-				+0.4
1,188,587	-				-0.6
1,188,587	-				+0.4
1,188,587	-				+0.4
1,188,587	-				-1.2
1,188,590	+				+0.4
1,188,595	+				+0.4
1,188,595	+				+0.4
1,188,598	-				-1.2
1,188,603	-				+0.4
1,188,603	-				+0.4
1,188,651	+				-1.2
1,188,660	+				+0.4
1,188,672	-				-1.6
1,188,679	+				-0.6
1,188,679	+				+0.4
1,188,680	+				-1.6
1,188,690	+				-1.2
1,188,698	-				-0.6
1,188,707	+				+0.4
1,188,715	-				+0.4
1,188,715	-				+0.4
1,188,715	-				-0.6
1,188,717	+				-0.6
1,188,729	+				-1.2
1,188,730	+				-0.6
1,188,730	+				-0.6
1,188,732	-				-1.2
1,188,732	-				+0.4
1,188,735	+				+0.4
1,188,735	+				-0.6
1,188,735	+				-1.6
1,188,735	+				+0.4
1,188,735	+				+0.4
1,188,735	+				+0.4
1,188,735	+				-0.6
1,188,735	+				+0.4
1,188,735	+				+0.4
1,188,735	+				+0.4
1,188,735	+				+0.4
1,188,735	+				+0.4
1,188,735	+				-0.6
1,188,735	+				-2.2
1,188,735	+				-0.6
1,188,735	+				+0.4
1,188,735	+				+0.4
1,188,735	+				+0.4
1,188,735	+				-0.6
1,188,740	+				-0.6
1,188,740	+				+0.4
1,188,742	+				-0.6
1,188,742	+				-2.4
1,188,742	+				+0.4
1,188,742	+				-0.6
1,188,743	-				-1.6
1,188,743	-				+0.4
1,188,743	-				+0.4
1,188,762	-				+0.4
1,188,792	+				-2.9
1,188,794	-				+0.4
1,188,796	-				+0.4
1,188,797	+				-0.6
1,188,804	+				-1.2
1,188,808	-				-0.6
1,188,817	+				-1.2
1,188,817	+				-0.6
1,188,817	+				+0.4
1,188,817	+				-0.6
1,188,819	-				+0.4
1,188,819	-				+0.4
1,188,825	-				+0.4
1,188,825	-				+0.4
1,188,825	-				+0.4
1,188,825	-				-0.6
1,188,830	-				+0.4
1,188,833	-				-1.2
1,188,883	-		Dsui_1135	0.14	-0.6
1,188,884	+		Dsui_1135	0.15	-1.9
1,188,886	+		Dsui_1135	0.15	+0.4
1,188,886	+		Dsui_1135	0.15	-0.6
1,188,886	+		Dsui_1135	0.15	+0.4
1,188,886	+		Dsui_1135	0.15	-1.2
1,188,889	+		Dsui_1135	0.16	-1.2
1,188,892	+		Dsui_1135	0.17	+0.4
1,188,892	+		Dsui_1135	0.17	+0.4
1,188,892	+		Dsui_1135	0.17	-0.6
1,188,892	+		Dsui_1135	0.17	+0.4
1,188,892	+		Dsui_1135	0.17	-2.6
1,188,892	-		Dsui_1135	0.17	-0.6
1,188,897	-		Dsui_1135	0.18	-1.6
1,188,899	+		Dsui_1135	0.18	-0.6
1,188,900	-		Dsui_1135	0.19	+0.4
1,188,900	-		Dsui_1135	0.19	+0.4
1,188,900	-		Dsui_1135	0.19	+0.4
1,188,900	-		Dsui_1135	0.19	-1.6
1,188,902	-		Dsui_1135	0.19	-0.6
1,188,906	+		Dsui_1135	0.20	-1.2
1,188,906	+		Dsui_1135	0.20	-2.9
1,188,922	+		Dsui_1135	0.24	-0.6
1,188,931	+		Dsui_1135	0.26	-2.8
1,188,936	+		Dsui_1135	0.27	+0.4
1,188,937	+		Dsui_1135	0.28	-0.6
1,188,938	+		Dsui_1135	0.28	+0.4
1,188,938	+		Dsui_1135	0.28	-2.2
1,188,938	+		Dsui_1135	0.28	+0.4
1,188,938	+		Dsui_1135	0.28	+0.4
1,188,939	-		Dsui_1135	0.28	-1.2
1,188,939	-		Dsui_1135	0.28	-0.6
1,188,939	-		Dsui_1135	0.28	-1.6
1,188,943	+		Dsui_1135	0.29	+0.4
1,188,943	+		Dsui_1135	0.29	-1.2
1,188,944	-		Dsui_1135	0.29	-0.6
1,188,944	-		Dsui_1135	0.29	-0.6
1,188,944	-		Dsui_1135	0.29	-0.5
1,188,944	-		Dsui_1135	0.29	-0.6
1,188,944	-		Dsui_1135	0.29	-0.6
1,188,944	-		Dsui_1135	0.29	-1.2
1,188,946	-		Dsui_1135	0.30	-0.6
1,188,946	-		Dsui_1135	0.30	-1.6
1,188,948	+		Dsui_1135	0.30	-2.2
1,188,951	-		Dsui_1135	0.31	-0.6
1,188,951	-		Dsui_1135	0.31	-0.6
1,188,951	-		Dsui_1135	0.31	-0.6
1,188,951	-		Dsui_1135	0.31	+0.4
1,188,970	+		Dsui_1135	0.36	-1.6
1,188,978	-		Dsui_1135	0.38	-0.6
1,188,988	-		Dsui_1135	0.40	-2.9
1,188,990	+		Dsui_1135	0.41	-0.1
1,188,995	+		Dsui_1135	0.42	+0.4
1,189,003	-		Dsui_1135	0.44	+1.4
1,189,014	+		Dsui_1135	0.47	+0.4
1,189,018	-		Dsui_1135	0.48	-1.6
1,189,022	-		Dsui_1135	0.49	-0.6
1,189,026	+		Dsui_1135	0.50	+0.4
1,189,028	+		Dsui_1135	0.50	-0.6
1,189,028	-		Dsui_1135	0.50	+0.4
1,189,034	-		Dsui_1135	0.52	+0.4
1,189,038	+		Dsui_1135	0.53	+0.4
1,189,038	+		Dsui_1135	0.53	-2.2
1,189,040	+		Dsui_1135	0.53	-1.6
1,189,040	+		Dsui_1135	0.53	+0.4
1,189,041	+		Dsui_1135	0.53	+0.4
1,189,041	+		Dsui_1135	0.53	+0.4
1,189,041	-		Dsui_1135	0.53	-0.6
1,189,046	-		Dsui_1135	0.55	-0.6
1,189,046	-		Dsui_1135	0.55	+0.4
1,189,048	+		Dsui_1135	0.55	-0.6
1,189,048	+		Dsui_1135	0.55	-2.4
1,189,049	-		Dsui_1135	0.55	+0.4
1,189,049	-		Dsui_1135	0.55	-0.6
1,189,050	+		Dsui_1135	0.56	-2.6
1,189,053	+		Dsui_1135	0.56	-1.6
1,189,053	+		Dsui_1135	0.56	-0.6
1,189,053	-		Dsui_1135	0.56	-0.6
1,189,056	-		Dsui_1135	0.57	-1.2
1,189,056	-		Dsui_1135	0.57	+0.4
1,189,056	-		Dsui_1135	0.57	+0.4
1,189,063	+		Dsui_1135	0.59	+0.4
1,189,067	+		Dsui_1135	0.60	+0.4
1,189,071	-				-1.2
1,189,071	-		Dsui_1135	0.61	+0.4
1,189,071	-		Dsui_1135	0.61	-0.6
1,189,071	-		Dsui_1135	0.61	+0.4
1,189,073	+		Dsui_1135	0.61	-1.6
1,189,073	+		Dsui_1135	0.61	-0.6
1,189,078	+		Dsui_1135	0.62	-0.6
1,189,078	-		Dsui_1135	0.62	+0.4
1,189,080	-		Dsui_1135	0.63	+0.4
1,189,083	+		Dsui_1135	0.64	-0.6
1,189,083	+		Dsui_1135	0.64	-0.6
1,189,083	+		Dsui_1135	0.64	-1.6
1,189,083	+		Dsui_1135	0.64	-1.2
1,189,083	+		Dsui_1135	0.64	-1.2
1,189,086	-		Dsui_1135	0.64	-1.9
1,189,086	-		Dsui_1135	0.64	+0.4
1,189,088	+		Dsui_1135	0.65	-3.0
1,189,088	+		Dsui_1135	0.65	-0.6
1,189,091	-		Dsui_1135	0.66	+0.4
1,189,091	-		Dsui_1135	0.66	-0.6
1,189,091	-		Dsui_1135	0.66	+0.4
1,189,091	-		Dsui_1135	0.66	+0.4
1,189,091	-		Dsui_1135	0.66	+0.4
1,189,091	-		Dsui_1135	0.66	-1.2
1,189,091	-		Dsui_1135	0.66	-3.5
1,189,091	-		Dsui_1135	0.66	-0.6
1,189,091	-		Dsui_1135	0.66	-1.9
1,189,093	+		Dsui_1135	0.66	+0.4
1,189,093	+		Dsui_1135	0.66	-1.6
1,189,096	-		Dsui_1135	0.67	+0.4
1,189,096	-		Dsui_1135	0.67	+0.4
1,189,096	-		Dsui_1135	0.67	-0.6
1,189,096	-		Dsui_1135	0.67	+0.4
1,189,100	+		Dsui_1135	0.68	+0.4
1,189,101	-		Dsui_1135	0.68	+0.4
1,189,101	-		Dsui_1135	0.68	+0.4
1,189,106	-		Dsui_1135	0.69	-1.2
1,189,108	-		Dsui_1135	0.70	-2.4
1,189,108	-		Dsui_1135	0.70	-0.6
1,189,116	-		Dsui_1135	0.72	-0.6
1,189,148	-		Dsui_1135	0.80	+0.4
1,189,149	+		Dsui_1135	0.80	+0.4
1,189,149	+		Dsui_1135	0.80	-1.9
1,189,149	+		Dsui_1135	0.80	-0.6
1,189,157	-		Dsui_1135	0.82	+0.4
1,189,157	-		Dsui_1135	0.82	-2.4
1,189,168	+		Dsui_1135	0.85	-1.9
1,189,168	+		Dsui_1135	0.85	-1.6
1,189,172	+		Dsui_1135	0.86	-0.6
1,189,172	+		Dsui_1135	0.86	-1.2
1,189,173	+		Dsui_1135	0.86	+0.4
1,189,176	-		Dsui_1135	0.87	+0.4
1,189,178	+		Dsui_1135	0.87	-1.6
1,189,178	+		Dsui_1135	0.87	-0.6
1,189,180	-		Dsui_1135	0.88	-1.9
1,189,180	-		Dsui_1135	0.88	+0.4
1,189,180	-		Dsui_1135	0.88	-0.6
1,189,186	-		Dsui_1135	0.89	+0.4
1,189,200	-				-0.6
1,189,211	-				-2.8
1,189,214	-				+0.4
1,189,219	+				+0.4
1,189,219	+				-2.4
1,189,219	+				-0.6
1,189,229	-				-0.6
1,189,233	+				+0.4
1,189,238	+				+0.4
1,189,238	+				+0.4
1,189,242	+				+0.4
1,189,243	+				+0.4
1,189,243	+				-1.2
1,189,243	+				+0.4
1,189,243	+				+0.4
1,189,246	-				-1.2
1,189,247	+				+0.4
1,189,248	+				+0.4
1,189,251	-				-0.6
1,189,252	+				+0.4
1,189,252	-				-1.6
1,189,252	-				-1.6
1,189,255	-				-0.6
1,189,260	-				-1.6
1,189,266	+				-0.3
1,189,315	-				+0.4
1,189,392	+				-0.2
1,189,398	+				-0.2
1,189,398	+				-0.1
1,189,398	+				-0.1
1,189,419	-		Dsui_1136	0.10	+0.4
1,189,434	+		Dsui_1136	0.12	+0.4
1,189,468	+		Dsui_1136	0.15	-0.4
1,189,481	-		Dsui_1136	0.17	+0.4
1,189,483	-		Dsui_1136	0.17	-1.2
1,189,501	-		Dsui_1136	0.19	+0.4
1,189,503	-		Dsui_1136	0.19	-1.2
1,189,673	-		Dsui_1136	0.37	+0.4
1,189,673	-		Dsui_1136	0.37	+0.4
1,189,675	+		Dsui_1136	0.37	-0.1
1,189,749	+		Dsui_1136	0.45	-0.0
1,189,752	-		Dsui_1136	0.45	-0.6
1,189,763	-		Dsui_1136	0.47	+0.4
1,189,770	-		Dsui_1136	0.47	-1.2
1,189,881	-		Dsui_1136	0.59	+0.4
1,189,881	-		Dsui_1136	0.59	-1.2
1,189,896	+		Dsui_1136	0.61	-0.1
1,190,003	+		Dsui_1136	0.72	-0.0
1,190,003	+		Dsui_1136	0.72	-0.2
1,190,011	-		Dsui_1136	0.73	-0.6
1,190,031	+		Dsui_1136	0.75	-0.1
1,190,108	+		Dsui_1136	0.83	-0.4
1,190,189	+				-0.1
1,190,202	-				-0.6
1,190,228	+				-1.5