Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001131

Experiment: Plant outgrowth control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant outgrowth control
1,252,702	+				+0.1
1,252,702	+				+0.1
1,252,702	+				-2.4
1,252,702	+				-0.4
1,252,703	-				-1.8
1,252,704	+				-0.8
1,252,705	-				-0.6
1,252,705	-				-0.8
1,252,738	-		ABIE53_001130	0.11	+0.2
1,252,794	+		ABIE53_001130	0.22	-0.8
1,252,794	+		ABIE53_001130	0.22	-0.7
1,252,794	+		ABIE53_001130	0.22	+0.6
1,252,795	-		ABIE53_001130	0.22	+1.2
1,252,795	-		ABIE53_001130	0.22	+0.2
1,252,887	+		ABIE53_001130	0.39	+0.2
1,252,887	+		ABIE53_001130	0.39	+0.4
1,252,980	+		ABIE53_001130	0.56	-0.6
1,252,980	+		ABIE53_001130	0.56	+1.0
1,252,980	+		ABIE53_001130	0.56	+0.5
1,252,980	+		ABIE53_001130	0.56	+0.2
1,252,980	+		ABIE53_001130	0.56	+0.2
1,252,980	+		ABIE53_001130	0.56	-0.7
1,252,980	+		ABIE53_001130	0.56	+0.6
1,252,980	+		ABIE53_001130	0.56	-1.6
1,252,980	+		ABIE53_001130	0.56	+0.2
1,252,980	+		ABIE53_001130	0.56	-2.4
1,252,981	-		ABIE53_001130	0.56	-1.6
1,252,981	-		ABIE53_001130	0.56	-1.5
1,252,981	-		ABIE53_001130	0.56	+2.2
1,252,981	-		ABIE53_001130	0.56	-0.7
1,253,019	+		ABIE53_001130	0.63	+0.1
1,253,019	+		ABIE53_001130	0.63	+0.1
1,253,020	-		ABIE53_001130	0.64	-1.3
1,253,020	-		ABIE53_001130	0.64	+1.3
1,253,020	-		ABIE53_001130	0.64	-0.8
1,253,020	-		ABIE53_001130	0.64	+1.2
1,253,020	-		ABIE53_001130	0.64	-1.2
1,253,020	-		ABIE53_001130	0.64	+1.4
1,253,020	-		ABIE53_001130	0.64	+0.2
1,253,196	-				-1.2
1,253,272	+				-0.8
1,253,272	+				-0.5
1,253,272	+				+1.3
1,253,272	+				+0.2
1,253,273	-				-1.2
1,253,273	-				-1.2
1,253,285	+				-1.7
1,253,285	+				-0.6
1,253,285	+				-1.4
1,253,285	+				+0.0
1,253,285	+				+2.2
1,253,285	+				-1.7
1,253,285	+				+0.5
1,253,285	+				-0.8
1,253,285	+				-0.1
1,253,286	-				-1.6
1,253,286	-				-0.2
1,253,286	-				-0.2
1,253,351	+				+1.2
1,253,729	+		ABIE53_001131	0.43	+1.2
1,253,729	+		ABIE53_001131	0.43	-0.9
1,253,729	+		ABIE53_001131	0.43	+2.2
1,253,730	-		ABIE53_001131	0.43	-0.4
1,253,730	-		ABIE53_001131	0.43	-0.8
1,253,730	-		ABIE53_001131	0.43	-1.1
1,253,822	+		ABIE53_001131	0.52	-1.4
1,253,822	+		ABIE53_001131	0.52	+1.2
1,253,822	+		ABIE53_001131	0.52	+2.7
1,253,822	+		ABIE53_001131	0.52	+1.0
1,253,822	+		ABIE53_001131	0.52	+0.7
1,253,822	+		ABIE53_001131	0.52	-0.6
1,253,822	+		ABIE53_001131	0.52	-0.1
1,253,822	+		ABIE53_001131	0.52	-2.5
1,253,822	+		ABIE53_001131	0.52	+0.2
1,253,822	+		ABIE53_001131	0.52	+0.2
1,253,822	+		ABIE53_001131	0.52	+0.1
1,253,822	+		ABIE53_001131	0.52	+0.1
1,253,823	-		ABIE53_001131	0.52	+0.2
1,253,823	-		ABIE53_001131	0.52	-0.8
1,253,823	-		ABIE53_001131	0.52	-3.0
1,253,823	-		ABIE53_001131	0.52	-0.7
1,253,823	-		ABIE53_001131	0.52	+0.1
1,253,823	-		ABIE53_001131	0.52	-0.1
1,253,823	-		ABIE53_001131	0.52	-0.2
1,253,823	-		ABIE53_001131	0.52	-1.6
1,253,823	-		ABIE53_001131	0.52	+0.2
1,253,823	-		ABIE53_001131	0.52	-0.2
1,253,823	-		ABIE53_001131	0.52	+1.2
1,253,823	-		ABIE53_001131	0.52	-0.4
1,253,823	-		ABIE53_001131	0.52	+1.2
1,253,823	-		ABIE53_001131	0.52	-1.9
1,253,823	-		ABIE53_001131	0.52	+0.2
1,253,823	-		ABIE53_001131	0.52	-1.0
1,253,823	-		ABIE53_001131	0.52	+0.2
1,253,823	-		ABIE53_001131	0.52	+1.2
1,253,823	-		ABIE53_001131	0.52	-0.9
1,253,823	-		ABIE53_001131	0.52	+0.2
1,253,837	+		ABIE53_001131	0.53	+0.6
1,253,837	+		ABIE53_001131	0.53	-2.0
1,253,838	-		ABIE53_001131	0.53	-1.0
1,254,110	+		ABIE53_001131	0.80	+1.2
1,254,110	+		ABIE53_001131	0.80	-0.3
1,254,110	+		ABIE53_001131	0.80	-0.8
1,254,110	+		ABIE53_001131	0.80	+0.3
1,254,110	+		ABIE53_001131	0.80	+0.4
1,254,110	+		ABIE53_001131	0.80	-0.4
1,254,110	+		ABIE53_001131	0.80	-1.2
1,254,111	-		ABIE53_001131	0.80	-1.6
1,254,111	-		ABIE53_001131	0.80	-0.0
1,254,111	-		ABIE53_001131	0.80	-2.6
1,254,111	-		ABIE53_001131	0.80	-0.6
1,254,111	-		ABIE53_001131	0.80	+0.2
1,254,111	-		ABIE53_001131	0.80	-1.5
1,254,111	-		ABIE53_001131	0.80	-1.2
1,254,307	+				-1.2
1,254,307	+				-0.5
1,254,308	-				-1.1
1,254,308	-				-0.4
1,254,308	-				-0.2
1,254,322	+				+2.1
1,254,322	+				-0.3
1,254,322	+				+0.1
1,254,322	+				-0.8
1,254,322	+				+0.7
1,254,322	+				+0.8
1,254,322	+				+0.4
1,254,322	+				-1.4
1,254,322	+				+0.3
1,254,322	+				-0.6
1,254,322	+				+0.5
1,254,322	+				-0.2
1,254,322	+				+0.3
1,254,322	+				+0.2
1,254,322	+				+0.6
1,254,323	-				-0.4
1,254,323	-				-2.6
1,254,323	-				-0.4
1,254,323	-				-2.1
1,254,323	-				-1.2
1,254,323	-				+0.2
1,254,323	-				-0.4
1,254,323	-				-0.1
1,254,323	-				-0.8
1,254,323	-				-1.1
1,254,340	+				-1.2
1,254,340	+				-0.4
1,254,341	-				-0.0
1,254,368	+				-2.4
1,254,369	-				-1.0
1,254,387	+				+0.1
1,254,387	+				-0.8
1,254,387	+				+2.7
1,254,387	+				+1.2
1,254,388	-				-0.7
1,254,388	-				-0.4
1,254,388	-				+2.0
1,254,388	-				-0.8
1,254,388	-				-0.7
1,254,388	-				-0.1
1,254,388	-				-1.6
1,254,388	-				-0.8
1,254,399	+				+0.6
1,254,399	+				-0.8
1,254,400	-				+0.6
1,254,400	-				-1.3
1,254,418	+				-0.4
1,254,419	-				-1.2
1,254,427	+				+0.6
1,254,427	+				-1.3
1,254,427	+				-0.4
1,254,427	+				-0.4
1,254,427	+				-0.8
1,254,427	+				+1.7
1,254,427	+				+1.2
1,254,427	+				-1.8
1,254,427	+				+0.5
1,254,427	+				+0.1
1,254,427	+				-0.2
1,254,428	-				+1.7
1,254,428	-				-1.2
1,254,428	-				-0.4
1,254,428	-				-0.7
1,254,428	-				+1.7
1,254,469	+				-0.2
1,254,469	+				-0.1
1,254,469	+				+0.2
1,254,469	+				-1.0
1,254,469	+				+1.2
1,254,470	-				-0.8
1,254,470	-				+0.2
1,254,470	-				-1.2
1,254,518	+				+0.1
1,254,518	+				+0.2
1,254,518	+				+0.2
1,254,518	+				-0.6
1,254,518	+				-0.2
1,254,518	+				+2.0
1,254,519	-				+1.6
1,254,519	-				+0.2
1,254,519	-				-0.0
1,254,519	-				-0.6
1,254,551	+		ABIE53_001132	0.10	-1.6
1,254,565	+		ABIE53_001132	0.11	+1.7
1,254,565	+		ABIE53_001132	0.11	+0.2
1,254,565	+		ABIE53_001132	0.11	+1.2
1,254,565	+		ABIE53_001132	0.11	-0.3
1,254,565	+		ABIE53_001132	0.11	-0.5
1,254,565	+		ABIE53_001132	0.11	-0.5
1,254,565	+		ABIE53_001132	0.11	-0.6
1,254,565	+		ABIE53_001132	0.11	-0.4
1,254,566	-		ABIE53_001132	0.11	-1.4
1,254,566	-		ABIE53_001132	0.11	-1.4
1,254,566	-		ABIE53_001132	0.11	-1.0
1,254,566	-		ABIE53_001132	0.11	-0.7
1,254,566	-		ABIE53_001132	0.11	+1.2
1,254,566	-		ABIE53_001132	0.11	-2.1
1,254,566	-		ABIE53_001132	0.11	-1.6
1,254,566	-		ABIE53_001132	0.11	-2.4
1,254,566	-		ABIE53_001132	0.11	-0.8
1,254,571	+		ABIE53_001132	0.12	-0.2
1,254,571	+		ABIE53_001132	0.12	+0.8
1,254,571	+		ABIE53_001132	0.12	+0.6
1,254,571	+		ABIE53_001132	0.12	-0.6
1,254,572	-		ABIE53_001132	0.12	-0.3
1,254,578	+		ABIE53_001132	0.12	-0.4
1,254,579	-		ABIE53_001132	0.12	-0.4
1,254,581	+		ABIE53_001132	0.13	-0.2
1,254,581	+		ABIE53_001132	0.13	-0.8
1,254,581	+		ABIE53_001132	0.13	+0.2
1,254,581	+		ABIE53_001132	0.13	-0.9
1,254,581	+		ABIE53_001132	0.13	-0.0
1,254,581	+		ABIE53_001132	0.13	-0.6
1,254,581	+		ABIE53_001132	0.13	-0.8
1,254,581	+		ABIE53_001132	0.13	+1.2
1,254,581	+		ABIE53_001132	0.13	+1.5
1,254,582	-		ABIE53_001132	0.13	-0.1
1,254,611	-		ABIE53_001132	0.15	-0.2
1,254,611	-		ABIE53_001132	0.15	+0.4
1,254,639	+		ABIE53_001132	0.17	-0.9
1,254,640	-		ABIE53_001132	0.17	-0.0
1,254,905	-		ABIE53_001132	0.38	-0.8
1,254,964	-		ABIE53_001132	0.42	-3.0
1,255,153	+		ABIE53_001132	0.57	+1.2
1,255,153	+		ABIE53_001132	0.57	-1.8
1,255,153	+		ABIE53_001132	0.57	+0.1
1,255,153	+		ABIE53_001132	0.57	+1.0
1,255,153	+		ABIE53_001132	0.57	-0.6
1,255,153	+		ABIE53_001132	0.57	+3.2
1,255,153	+		ABIE53_001132	0.57	-0.4
1,255,153	+		ABIE53_001132	0.57	-0.9
1,255,153	+		ABIE53_001132	0.57	-1.0
1,255,153	+		ABIE53_001132	0.57	+2.2
1,255,153	+		ABIE53_001132	0.57	-0.8
1,255,153	+		ABIE53_001132	0.57	-1.2
1,255,154	-		ABIE53_001132	0.57	+1.2
1,255,154	-		ABIE53_001132	0.57	-2.3
1,255,154	-		ABIE53_001132	0.57	+0.3
1,255,154	-		ABIE53_001132	0.57	+0.6
1,255,154	-		ABIE53_001132	0.57	+1.2
1,255,154	-		ABIE53_001132	0.57	-0.5
1,255,154	-		ABIE53_001132	0.57	+1.2
1,255,154	-		ABIE53_001132	0.57	+2.7
1,255,154	-		ABIE53_001132	0.57	-0.8
1,255,154	-		ABIE53_001132	0.57	-0.6
1,255,154	-		ABIE53_001132	0.57	-0.3
1,255,186	+		ABIE53_001132	0.60	-0.2
1,255,186	+		ABIE53_001132	0.60	-0.7
1,255,187	-		ABIE53_001132	0.60	+0.5