Strain Fitness in Paraburkholderia graminis OAS925 around ABIE53_001025

Experiment: Plant outgrowth control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Plant outgrowth control
1,125,413	+		ABIE53_001024	0.21	-0.1
1,125,413	+		ABIE53_001024	0.21	-0.5
1,125,414	-		ABIE53_001024	0.21	+1.2
1,125,414	-		ABIE53_001024	0.21	+1.2
1,125,414	-		ABIE53_001024	0.21	-1.4
1,125,414	-		ABIE53_001024	0.21	+1.2
1,125,414	-		ABIE53_001024	0.21	-2.4
1,125,432	+		ABIE53_001024	0.23	+0.2
1,125,432	+		ABIE53_001024	0.23	-0.4
1,125,432	+		ABIE53_001024	0.23	+0.2
1,125,433	-		ABIE53_001024	0.23	-0.5
1,125,433	-		ABIE53_001024	0.23	-0.4
1,125,433	-		ABIE53_001024	0.23	+1.2
1,125,433	-		ABIE53_001024	0.23	+1.6
1,125,475	+		ABIE53_001024	0.27	-1.3
1,125,476	-		ABIE53_001024	0.27	-1.5
1,125,476	-		ABIE53_001024	0.27	+0.9
1,125,492	+		ABIE53_001024	0.29	-1.2
1,125,493	-		ABIE53_001024	0.29	-1.1
1,125,493	-		ABIE53_001024	0.29	-0.9
1,125,552	-		ABIE53_001024	0.35	+0.2
1,125,556	+		ABIE53_001024	0.35	+1.2
1,125,557	-		ABIE53_001024	0.35	-0.8
1,125,557	-		ABIE53_001024	0.35	-1.4
1,125,616	+		ABIE53_001024	0.42	-0.4
1,125,617	-		ABIE53_001024	0.42	-0.1
1,125,687	+		ABIE53_001024	0.49	-1.6
1,125,687	+		ABIE53_001024	0.49	-1.2
1,125,687	+		ABIE53_001024	0.49	+1.8
1,125,687	+		ABIE53_001024	0.49	-0.7
1,125,687	+		ABIE53_001024	0.49	+1.5
1,125,687	+		ABIE53_001024	0.49	-1.2
1,125,687	+		ABIE53_001024	0.49	-0.7
1,125,688	-		ABIE53_001024	0.49	-0.7
1,125,688	-		ABIE53_001024	0.49	-2.3
1,125,688	-		ABIE53_001024	0.49	-0.3
1,125,688	-		ABIE53_001024	0.49	-0.8
1,125,688	-		ABIE53_001024	0.49	-0.8
1,125,688	-		ABIE53_001024	0.49	-1.4
1,125,688	-		ABIE53_001024	0.49	-0.3
1,125,688	-		ABIE53_001024	0.49	+0.2
1,125,688	-		ABIE53_001024	0.49	-0.6
1,125,688	-		ABIE53_001024	0.49	-0.8
1,125,688	-		ABIE53_001024	0.49	-0.2
1,125,688	-		ABIE53_001024	0.49	-1.5
1,125,688	-		ABIE53_001024	0.49	-0.2
1,125,688	-		ABIE53_001024	0.49	+0.8
1,125,688	-		ABIE53_001024	0.49	+0.2
1,125,688	-		ABIE53_001024	0.49	+1.2
1,125,688	-		ABIE53_001024	0.49	-2.0
1,125,709	-		ABIE53_001024	0.51	+0.0
1,125,779	+		ABIE53_001024	0.58	-2.1
1,125,924	+		ABIE53_001024	0.73	+1.2
1,125,924	+		ABIE53_001024	0.73	+0.5
1,125,924	+		ABIE53_001024	0.73	+0.2
1,125,924	+		ABIE53_001024	0.73	+0.6
1,125,925	-		ABIE53_001024	0.73	-2.4
1,125,925	-		ABIE53_001024	0.73	+1.2
1,125,925	-		ABIE53_001024	0.73	+1.2
1,125,925	-		ABIE53_001024	0.73	-1.2
1,125,929	+		ABIE53_001024	0.74	-0.5
1,125,929	+		ABIE53_001024	0.74	-0.4
1,125,929	+		ABIE53_001024	0.74	+1.3
1,125,930	-		ABIE53_001024	0.74	+1.9
1,125,933	+		ABIE53_001024	0.74	-0.3
1,125,933	+		ABIE53_001024	0.74	-2.5
1,125,933	+		ABIE53_001024	0.74	-2.0
1,125,933	+		ABIE53_001024	0.74	-0.8
1,125,934	-		ABIE53_001024	0.74	-2.8
1,125,934	-		ABIE53_001024	0.74	-0.7
1,125,942	-		ABIE53_001024	0.75	-1.4
1,125,942	-		ABIE53_001024	0.75	+0.7
1,126,003	+		ABIE53_001024	0.81	-0.4
1,126,003	+		ABIE53_001024	0.81	+0.6
1,126,004	-		ABIE53_001024	0.81	-2.4
1,126,030	-		ABIE53_001024	0.84	-1.6
1,126,084	+		ABIE53_001024	0.90	-1.8
1,126,085	-		ABIE53_001024	0.90	-0.8
1,126,130	+				-1.3
1,126,131	-				+0.3
1,126,148	-				-1.0
1,126,148	-				-0.8
1,126,185	+				+0.6
1,126,185	+				-1.0
1,126,185	+				+0.6
1,126,185	+				+0.6
1,126,185	+				+0.2
1,126,185	+				+1.2
1,126,186	-				-1.6
1,126,186	-				-0.1
1,126,186	-				-0.4
1,126,186	-				-0.6
1,126,186	-				+0.9
1,126,186	-				+0.7
1,126,186	-				-0.4
1,126,265	+				-1.6
1,126,265	+				-0.3
1,126,266	-				-1.3
1,126,368	-		ABIE53_001025	0.14	-0.8
1,126,383	+		ABIE53_001025	0.15	-1.8
1,126,383	+		ABIE53_001025	0.15	-0.8
1,126,383	+		ABIE53_001025	0.15	+0.2
1,126,383	+		ABIE53_001025	0.15	+1.4
1,126,383	+		ABIE53_001025	0.15	-0.3
1,126,383	+		ABIE53_001025	0.15	-0.7
1,126,383	+		ABIE53_001025	0.15	+0.3
1,126,383	+		ABIE53_001025	0.15	-1.2
1,126,384	-		ABIE53_001025	0.15	+1.7
1,126,384	-		ABIE53_001025	0.15	-1.1
1,126,384	-		ABIE53_001025	0.15	+0.3
1,126,384	-		ABIE53_001025	0.15	+0.6
1,126,384	-		ABIE53_001025	0.15	-0.6
1,126,384	-		ABIE53_001025	0.15	-0.0
1,126,417	+		ABIE53_001025	0.17	-2.1
1,126,418	-		ABIE53_001025	0.17	+2.7
1,126,612	+		ABIE53_001025	0.31	+0.7
1,126,612	+		ABIE53_001025	0.31	+1.2
1,126,612	+		ABIE53_001025	0.31	-0.6
1,126,612	+		ABIE53_001025	0.31	-0.2
1,126,613	-		ABIE53_001025	0.31	+0.3
1,126,628	+		ABIE53_001025	0.33	-1.4
1,126,628	+		ABIE53_001025	0.33	-0.1
1,126,628	+		ABIE53_001025	0.33	-0.2
1,126,628	+		ABIE53_001025	0.33	-0.1
1,126,628	+		ABIE53_001025	0.33	-1.6
1,126,628	+		ABIE53_001025	0.33	-1.6
1,126,628	+		ABIE53_001025	0.33	+0.3
1,126,628	+		ABIE53_001025	0.33	+0.4
1,126,628	+		ABIE53_001025	0.33	-0.6
1,126,629	-		ABIE53_001025	0.33	+0.2
1,126,629	-		ABIE53_001025	0.33	+0.3
1,126,629	-		ABIE53_001025	0.33	-0.4
1,126,646	+		ABIE53_001025	0.34	+1.2
1,126,647	-		ABIE53_001025	0.34	+2.3
1,126,857	-		ABIE53_001025	0.49	-0.3
1,126,857	-		ABIE53_001025	0.49	+2.2
1,126,871	+		ABIE53_001025	0.50	-0.8
1,126,872	-		ABIE53_001025	0.50	-1.2
1,126,872	-		ABIE53_001025	0.50	-1.2
1,126,940	+		ABIE53_001025	0.55	-1.8
1,126,940	+		ABIE53_001025	0.55	+0.5
1,126,941	-		ABIE53_001025	0.55	-2.2
1,126,941	-		ABIE53_001025	0.55	-0.4
1,127,140	+		ABIE53_001025	0.70	-0.4
1,127,140	+		ABIE53_001025	0.70	-2.4
1,127,141	-		ABIE53_001025	0.70	+2.2
1,127,141	-		ABIE53_001025	0.70	+0.7
1,127,191	+		ABIE53_001025	0.73	-1.1
1,127,192	-		ABIE53_001025	0.73	+0.1
1,127,218	+		ABIE53_001025	0.75	-1.5
1,127,218	+		ABIE53_001025	0.75	-0.1
1,127,218	+		ABIE53_001025	0.75	-0.6
1,127,219	-		ABIE53_001025	0.75	-0.7
1,127,219	-		ABIE53_001025	0.75	+2.0
1,127,219	-		ABIE53_001025	0.75	+1.2
1,127,219	-		ABIE53_001025	0.75	-0.1
1,127,219	-		ABIE53_001025	0.75	+0.2
1,127,219	-		ABIE53_001025	0.75	+2.7
1,127,219	-		ABIE53_001025	0.75	+0.6
1,127,221	+		ABIE53_001025	0.75	-1.2
1,127,221	+		ABIE53_001025	0.75	-0.4
1,127,221	+		ABIE53_001025	0.75	-1.4
1,127,221	+		ABIE53_001025	0.75	-1.3
1,127,221	+		ABIE53_001025	0.75	-0.5
1,127,221	+		ABIE53_001025	0.75	+0.9
1,127,222	-		ABIE53_001025	0.75	-2.0
1,127,222	-		ABIE53_001025	0.75	-1.3
1,127,222	-		ABIE53_001025	0.75	-1.9
1,127,222	-		ABIE53_001025	0.75	+0.6
1,127,222	-		ABIE53_001025	0.75	-1.1
1,127,225	+		ABIE53_001025	0.76	-1.5
1,127,225	+		ABIE53_001025	0.76	-1.2
1,127,226	-		ABIE53_001025	0.76	-1.4
1,127,283	+		ABIE53_001025	0.80	-1.4
1,127,283	+		ABIE53_001025	0.80	-0.3
1,127,284	-		ABIE53_001025	0.80	+0.4
1,127,284	-		ABIE53_001025	0.80	-0.8
1,127,365	+		ABIE53_001025	0.86	+0.6
1,127,365	+		ABIE53_001025	0.86	+1.2
1,127,365	+		ABIE53_001025	0.86	-1.2
1,127,366	-		ABIE53_001025	0.86	-2.5
1,127,384	+		ABIE53_001025	0.87	-1.2
1,127,384	+		ABIE53_001025	0.87	-2.0
1,127,385	-		ABIE53_001025	0.87	-0.4
1,127,434	+				+0.2
1,127,434	+				-1.0
1,127,434	+				-1.2
1,127,435	-				-1.0
1,127,561	-				-0.8
1,127,641	+				-1.8
1,127,641	+				+2.2
1,127,642	-				+0.2
1,127,642	-				+0.9
1,127,642	-				+1.7
1,127,659	+				-1.8
1,127,659	+				-1.8
1,127,659	+				-0.7
1,127,660	-				-0.4
1,127,760	+		ABIE53_001026	0.24	-0.8
1,127,788	+		ABIE53_001026	0.30	-0.8
1,127,789	-		ABIE53_001026	0.30	-0.0
1,127,794	+		ABIE53_001026	0.31	-0.4
1,127,794	+		ABIE53_001026	0.31	-0.7
1,127,918	+		ABIE53_001026	0.57	-1.6
1,127,918	+		ABIE53_001026	0.57	-2.0
1,127,918	+		ABIE53_001026	0.57	+0.0
1,127,918	+		ABIE53_001026	0.57	-0.4
1,127,919	-		ABIE53_001026	0.57	-2.5
1,127,958	+		ABIE53_001026	0.65	+1.2
1,127,958	+		ABIE53_001026	0.65	+0.4
1,127,959	-		ABIE53_001026	0.66	+0.2
1,127,959	-		ABIE53_001026	0.66	+0.9
1,128,046	+		ABIE53_001026	0.84	-1.9
1,128,046	+		ABIE53_001026	0.84	-0.2
1,128,052	+		ABIE53_001026	0.85	-1.8
1,128,052	+		ABIE53_001026	0.85	-1.2
1,128,052	+		ABIE53_001026	0.85	-2.3
1,128,052	+		ABIE53_001026	0.85	-0.3
1,128,052	+		ABIE53_001026	0.85	+1.2
1,128,053	-		ABIE53_001026	0.85	-0.4
1,128,053	-		ABIE53_001026	0.85	-0.1
1,128,081	-				-0.2
1,128,081	-				-0.0
1,128,106	+				+2.2
1,128,107	-				-1.8
1,128,107	-				+0.2
1,128,114	+				+1.2
1,128,114	+				-1.2
1,128,114	+				-1.0
1,128,115	-				-0.7
1,128,115	-				-1.2
1,128,115	-				-0.2
1,128,115	-				+1.2
1,128,184	+				-0.6
1,128,184	+				+0.2
1,128,184	+				+2.0
1,128,185	-				+0.1
1,128,185	-				+2.2
1,128,185	-				-1.5
1,128,203	+				+2.2
1,128,203	+				+1.0
1,128,204	-				+1.6
1,128,204	-				-0.7
1,128,204	-				-0.3
1,128,204	-				+1.4
1,128,204	-				+0.5
1,128,204	-				+0.2
1,128,204	-				-1.4
1,128,204	-				-0.2
1,128,253	+				+1.0
1,128,259	-				+0.6
1,128,420	-				+1.7
1,128,423	+				-0.2
1,128,423	+				-1.0
1,128,423	+				+1.9
1,128,424	-				-0.8
1,128,453	+				-1.5
1,128,453	+				+0.9
1,128,454	-				+0.4
1,128,477	+				+1.6
1,128,477	+				-0.4
1,128,477	+				-2.3
1,128,477	+				-0.8
1,128,496	+				-0.4
1,128,496	+				-1.8
1,128,496	+				-1.1
1,128,496	+				-0.3
1,128,496	+				-0.8
1,128,497	-				-1.8
1,128,497	-				+1.0
1,128,553	+				+1.5
1,128,554	-				+0.6