Experiment: Formate with Bacitracin 15.6 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS02755 and MMP_RS02760 are separated by 12 nucleotides MMP_RS02760 and MMP_RS02765 are separated by 4 nucleotides MMP_RS02765 and MMP_RS02770 are separated by 194 nucleotides
MMP_RS02755: MMP_RS02755 - ABC transporter permease, at 526,565 to 527,812
_RS02755
MMP_RS02760: MMP_RS02760 - COG1361 S-layer family protein, at 527,825 to 529,141
_RS02760
MMP_RS02765: MMP_RS02765 - ABC transporter ATP-binding protein, at 529,146 to 529,850
_RS02765
MMP_RS02770: MMP_RS02770 - hypothetical protein, at 530,045 to 530,620
_RS02770
Position (kb) 527
528
529
530 Strain fitness (log2 ratio) -2
-1
0
1
2 at 526.857 kb on + strand, within MMP_RS02755 at 526.892 kb on + strand, within MMP_RS02755 at 526.915 kb on - strand, within MMP_RS02755 at 527.462 kb on + strand, within MMP_RS02755 at 527.525 kb on - strand, within MMP_RS02755 at 527.535 kb on + strand, within MMP_RS02755 at 527.642 kb on - strand, within MMP_RS02755 at 527.642 kb on - strand, within MMP_RS02755 at 527.643 kb on + strand, within MMP_RS02755 at 527.643 kb on + strand, within MMP_RS02755 at 527.665 kb on - strand, within MMP_RS02755 at 527.697 kb on + strand at 527.762 kb on + strand at 527.771 kb on - strand at 527.789 kb on + strand at 527.817 kb on + strand at 527.882 kb on - strand at 527.883 kb on + strand at 528.041 kb on + strand, within MMP_RS02760 at 528.084 kb on + strand, within MMP_RS02760 at 528.113 kb on - strand, within MMP_RS02760 at 528.114 kb on + strand, within MMP_RS02760 at 528.114 kb on + strand, within MMP_RS02760 at 528.146 kb on + strand, within MMP_RS02760 at 528.153 kb on + strand, within MMP_RS02760 at 528.173 kb on + strand, within MMP_RS02760 at 528.208 kb on - strand, within MMP_RS02760 at 528.295 kb on - strand, within MMP_RS02760 at 528.301 kb on - strand, within MMP_RS02760 at 528.302 kb on + strand, within MMP_RS02760 at 528.302 kb on + strand, within MMP_RS02760 at 528.359 kb on - strand, within MMP_RS02760 at 528.401 kb on - strand, within MMP_RS02760 at 528.419 kb on - strand, within MMP_RS02760 at 528.420 kb on + strand, within MMP_RS02760 at 528.478 kb on + strand, within MMP_RS02760 at 528.481 kb on - strand, within MMP_RS02760 at 528.493 kb on - strand, within MMP_RS02760 at 528.625 kb on - strand, within MMP_RS02760 at 528.718 kb on - strand, within MMP_RS02760 at 528.759 kb on + strand, within MMP_RS02760 at 528.852 kb on + strand, within MMP_RS02760 at 528.921 kb on + strand, within MMP_RS02760 at 528.964 kb on - strand, within MMP_RS02760 at 529.143 kb on + strand at 529.225 kb on - strand, within MMP_RS02765 at 529.442 kb on - strand, within MMP_RS02765 at 529.560 kb on - strand, within MMP_RS02765 at 529.566 kb on + strand, within MMP_RS02765 at 529.578 kb on - strand, within MMP_RS02765 at 529.694 kb on - strand, within MMP_RS02765 at 529.850 kb on - strand at 529.946 kb on + strand at 529.972 kb on + strand at 530.014 kb on - strand at 530.014 kb on - strand at 530.042 kb on - strand at 530.102 kb on + strand at 530.104 kb on - strand, within MMP_RS02770 at 530.104 kb on - strand, within MMP_RS02770 at 530.104 kb on - strand, within MMP_RS02770 at 530.104 kb on - strand, within MMP_RS02770
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with Bacitracin 15.6 uM remove 526,857 + MMP_RS02755 0.23 -1.2 526,892 + MMP_RS02755 0.26 -0.7 526,915 - MMP_RS02755 0.28 -0.1 527,462 + MMP_RS02755 0.72 -1.7 527,525 - MMP_RS02755 0.77 -2.1 527,535 + MMP_RS02755 0.78 -1.4 527,642 - MMP_RS02755 0.86 -0.0 527,642 - MMP_RS02755 0.86 -1.2 527,643 + MMP_RS02755 0.86 -1.5 527,643 + MMP_RS02755 0.86 -1.2 527,665 - MMP_RS02755 0.88 -0.6 527,697 + -0.3 527,762 + -0.5 527,771 - -1.0 527,789 + -1.0 527,817 + -0.7 527,882 - -1.8 527,883 + -0.6 528,041 + MMP_RS02760 0.16 -0.2 528,084 + MMP_RS02760 0.20 -1.5 528,113 - MMP_RS02760 0.22 -0.6 528,114 + MMP_RS02760 0.22 -1.5 528,114 + MMP_RS02760 0.22 -0.8 528,146 + MMP_RS02760 0.24 -0.7 528,153 + MMP_RS02760 0.25 -1.0 528,173 + MMP_RS02760 0.26 +0.1 528,208 - MMP_RS02760 0.29 +0.8 528,295 - MMP_RS02760 0.36 -2.3 528,301 - MMP_RS02760 0.36 -1.3 528,302 + MMP_RS02760 0.36 -1.2 528,302 + MMP_RS02760 0.36 -0.0 528,359 - MMP_RS02760 0.41 -0.8 528,401 - MMP_RS02760 0.44 -0.9 528,419 - MMP_RS02760 0.45 +1.9 528,420 + MMP_RS02760 0.45 +0.1 528,478 + MMP_RS02760 0.50 +0.4 528,481 - MMP_RS02760 0.50 -0.0 528,493 - MMP_RS02760 0.51 -1.4 528,625 - MMP_RS02760 0.61 -1.1 528,718 - MMP_RS02760 0.68 -0.4 528,759 + MMP_RS02760 0.71 +0.3 528,852 + MMP_RS02760 0.78 -1.2 528,921 + MMP_RS02760 0.83 +0.2 528,964 - MMP_RS02760 0.86 -1.4 529,143 + -1.0 529,225 - MMP_RS02765 0.11 -0.8 529,442 - MMP_RS02765 0.42 -0.6 529,560 - MMP_RS02765 0.59 -1.0 529,566 + MMP_RS02765 0.60 -1.1 529,578 - MMP_RS02765 0.61 -0.8 529,694 - MMP_RS02765 0.78 -2.6 529,850 - -1.3 529,946 + -0.6 529,972 + -0.4 530,014 - +1.1 530,014 - +1.2 530,042 - +0.9 530,102 + +1.6 530,104 - MMP_RS02770 0.10 +1.5 530,104 - MMP_RS02770 0.10 +1.0 530,104 - MMP_RS02770 0.10 +0.7 530,104 - MMP_RS02770 0.10 +1.5
Or see this region's nucleotide sequence