Experiment: Formate with Bacitracin 15.6 uM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MMP_RS02195 and MMP_RS02200 are separated by 150 nucleotides MMP_RS02200 and MMP_RS02205 are separated by 62 nucleotides
MMP_RS02195: MMP_RS02195 - tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase, at 410,405 to 411,682
_RS02195
MMP_RS02200: MMP_RS02200 - methyl-accepting chemotaxis protein, at 411,833 to 414,028
_RS02200
MMP_RS02205: MMP_RS02205 - threonine--tRNA ligase, at 414,091 to 415,959
_RS02205
Position (kb) 411
412
413
414
415 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 410.845 kb on - strand, within MMP_RS02195 at 410.872 kb on - strand, within MMP_RS02195 at 410.884 kb on + strand, within MMP_RS02195 at 411.366 kb on - strand, within MMP_RS02195 at 411.484 kb on + strand, within MMP_RS02195 at 411.540 kb on - strand, within MMP_RS02195 at 411.560 kb on + strand at 411.580 kb on - strand at 411.581 kb on + strand at 411.710 kb on - strand at 411.743 kb on - strand at 411.743 kb on - strand at 411.744 kb on + strand at 411.782 kb on - strand at 411.783 kb on + strand at 411.784 kb on - strand at 411.784 kb on - strand at 411.784 kb on - strand at 411.784 kb on - strand at 411.784 kb on - strand at 411.785 kb on + strand at 411.785 kb on + strand at 411.786 kb on - strand at 411.786 kb on - strand at 411.786 kb on - strand at 411.786 kb on - strand at 411.786 kb on - strand at 411.786 kb on - strand at 411.787 kb on + strand at 411.787 kb on + strand at 411.787 kb on + strand at 411.787 kb on + strand at 411.806 kb on + strand at 411.817 kb on - strand at 411.818 kb on + strand at 411.819 kb on - strand at 411.819 kb on - strand at 411.819 kb on - strand at 411.895 kb on + strand at 411.928 kb on - strand at 411.931 kb on - strand at 411.938 kb on + strand at 412.053 kb on + strand, within MMP_RS02200 at 412.093 kb on + strand, within MMP_RS02200 at 412.201 kb on - strand, within MMP_RS02200 at 412.202 kb on + strand, within MMP_RS02200 at 412.291 kb on - strand, within MMP_RS02200 at 412.349 kb on + strand, within MMP_RS02200 at 412.540 kb on + strand, within MMP_RS02200 at 412.616 kb on - strand, within MMP_RS02200 at 412.617 kb on + strand, within MMP_RS02200 at 412.617 kb on + strand, within MMP_RS02200 at 412.645 kb on - strand, within MMP_RS02200 at 412.714 kb on - strand, within MMP_RS02200 at 412.715 kb on + strand, within MMP_RS02200 at 412.715 kb on + strand, within MMP_RS02200 at 412.718 kb on + strand, within MMP_RS02200 at 412.727 kb on + strand, within MMP_RS02200 at 412.783 kb on - strand, within MMP_RS02200 at 412.807 kb on + strand, within MMP_RS02200 at 412.975 kb on + strand, within MMP_RS02200 at 412.990 kb on - strand, within MMP_RS02200 at 413.407 kb on - strand, within MMP_RS02200 at 413.416 kb on + strand, within MMP_RS02200 at 413.492 kb on + strand, within MMP_RS02200 at 413.688 kb on - strand, within MMP_RS02200 at 413.689 kb on + strand, within MMP_RS02200 at 414.023 kb on + strand at 414.043 kb on + strand at 414.976 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Formate with Bacitracin 15.6 uM remove 410,845 - MMP_RS02195 0.34 +0.8 410,872 - MMP_RS02195 0.37 -0.3 410,884 + MMP_RS02195 0.37 +1.2 411,366 - MMP_RS02195 0.75 +1.0 411,484 + MMP_RS02195 0.84 +1.3 411,540 - MMP_RS02195 0.89 +2.3 411,560 + -1.5 411,580 - -0.5 411,581 + -1.9 411,710 - -0.6 411,743 - -0.1 411,743 - +0.6 411,744 + +0.5 411,782 - -0.3 411,783 + -0.2 411,784 - +0.6 411,784 - +0.3 411,784 - +0.0 411,784 - -0.7 411,784 - +2.8 411,785 + +0.5 411,785 + -0.2 411,786 - +0.2 411,786 - -1.2 411,786 - -3.6 411,786 - -0.3 411,786 - -0.6 411,786 - -1.0 411,787 + -0.1 411,787 + +0.4 411,787 + +0.1 411,787 + -0.2 411,806 + -0.3 411,817 - -0.0 411,818 + -0.7 411,819 - -0.1 411,819 - -0.5 411,819 - -0.3 411,895 + -0.0 411,928 - -0.0 411,931 - -1.9 411,938 + -1.3 412,053 + MMP_RS02200 0.10 -0.9 412,093 + MMP_RS02200 0.12 -0.9 412,201 - MMP_RS02200 0.17 -0.6 412,202 + MMP_RS02200 0.17 -0.6 412,291 - MMP_RS02200 0.21 +0.5 412,349 + MMP_RS02200 0.23 -0.6 412,540 + MMP_RS02200 0.32 +0.2 412,616 - MMP_RS02200 0.36 -0.9 412,617 + MMP_RS02200 0.36 +0.6 412,617 + MMP_RS02200 0.36 -1.2 412,645 - MMP_RS02200 0.37 -0.5 412,714 - MMP_RS02200 0.40 +0.2 412,715 + MMP_RS02200 0.40 -1.2 412,715 + MMP_RS02200 0.40 -0.7 412,718 + MMP_RS02200 0.40 +0.5 412,727 + MMP_RS02200 0.41 -0.5 412,783 - MMP_RS02200 0.43 -1.2 412,807 + MMP_RS02200 0.44 -2.1 412,975 + MMP_RS02200 0.52 +0.1 412,990 - MMP_RS02200 0.53 -1.7 413,407 - MMP_RS02200 0.72 -0.4 413,416 + MMP_RS02200 0.72 -0.6 413,492 + MMP_RS02200 0.76 -0.2 413,688 - MMP_RS02200 0.84 +0.5 413,689 + MMP_RS02200 0.85 -1.8 414,023 + +0.2 414,043 + +1.4 414,976 - +2.2
Or see this region's nucleotide sequence