Strain Fitness in Dechlorosoma suillum PS around Dsui_2232

Experiment: ALP with nitrite 0.15 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	ALP with nitrite 0.15 mM
2,372,319	+		Dsui_2231	0.38	+0.8
2,372,330	+				-0.2
2,372,330	+				+0.8
2,372,338	-		Dsui_2231	0.40	+0.8
2,372,338	-		Dsui_2231	0.40	-1.2
2,372,493	+		Dsui_2231	0.52	-0.2
2,372,572	+				+0.8
2,372,635	+		Dsui_2231	0.63	-0.8
2,372,635	-		Dsui_2231	0.63	-0.2
2,372,688	-		Dsui_2231	0.67	-1.5
2,372,698	-				+0.8
2,372,698	-		Dsui_2231	0.68	+1.8
2,372,749	+				-0.2
2,372,750	-		Dsui_2231	0.72	-1.5
2,372,767	-		Dsui_2231	0.73	+0.2
2,372,797	-		Dsui_2231	0.76	-1.2
2,372,814	+		Dsui_2231	0.77	-0.2
2,372,817	-		Dsui_2231	0.77	-1.7
2,372,882	+				-1.2
2,372,907	+		Dsui_2231	0.84	-1.2
2,372,948	+				+0.8
2,372,956	-		Dsui_2231	0.88	+0.8
2,372,995	+				+0.8
2,373,000	+				+0.8
2,373,003	-				+0.8
2,373,008	-				+0.8
2,373,017	-				+0.8
2,373,052	+				-0.8
2,373,090	+				-0.8
2,373,098	-				-0.2
2,373,098	-				-0.8
2,373,098	-				-0.2
2,373,098	-				+0.8
2,373,098	-				+0.8
2,373,109	-				+0.8
2,373,109	-				-0.2
2,373,112	+				+0.8
2,373,120	-				-2.0
2,373,120	-				-1.8
2,373,147	+				-1.5
2,373,155	-				+0.8
2,373,169	+				+0.8
2,373,202	+				+0.8
2,373,254	-				-0.2
2,373,282	+				+0.8
2,373,282	+				+0.8
2,373,290	-				-0.8
2,373,290	-				+0.8
2,373,291	-				+0.8
2,373,292	+				-0.2
2,373,299	+				-0.2
2,373,299	+				-2.2
2,373,317	+				+0.8
2,373,324	+				-0.2
2,373,324	+				-0.8
2,373,324	+				-0.2
2,373,400	+				+0.8
2,373,424	+		Dsui_2232	0.10	-0.2
2,373,425	+		Dsui_2232	0.10	-0.2
2,373,425	+				-0.8
2,373,429	+		Dsui_2232	0.11	+0.8
2,373,429	+				+0.8
2,373,429	+		Dsui_2232	0.11	-0.2
2,373,429	+		Dsui_2232	0.11	-0.8
2,373,430	+		Dsui_2232	0.11	-0.8
2,373,435	+				-0.8
2,373,435	+				+0.8
2,373,435	+				+0.8
2,373,435	+				+0.8
2,373,447	+				+0.8
2,373,463	+		Dsui_2232	0.13	-0.8
2,373,499	+				-0.2
2,373,499	+				-0.8
2,373,499	+				+0.8
2,373,499	+		Dsui_2232	0.16	-0.2
2,373,507	-				+0.8
2,373,507	-				-0.8
2,373,528	+				+0.8
2,373,528	+		Dsui_2232	0.19	-0.8
2,373,539	+				-0.2
2,373,557	+				+0.8
2,373,557	+				+0.8
2,373,557	+		Dsui_2232	0.21	-0.2
2,373,557	+				-0.2
2,373,557	+				+0.8
2,373,567	+				+0.8
2,373,575	+				+0.8
2,373,578	+				+0.8
2,373,578	+		Dsui_2232	0.23	-0.8
2,373,578	+		Dsui_2232	0.23	-0.8
2,373,578	+				+0.8
2,373,580	+				-0.8
2,373,580	+				-0.2
2,373,580	+				+0.8
2,373,588	+				+0.8
2,373,605	+				-0.2
2,373,618	+				+0.8
2,373,636	+				+0.8
2,373,655	+				+0.8
2,373,674	+				+0.8
2,373,696	+		Dsui_2232	0.33	-0.8
2,373,745	+				-0.2
2,373,745	+		Dsui_2232	0.37	-1.5
2,373,755	+		Dsui_2232	0.37	-0.8
2,373,755	+				+0.8
2,373,760	+				+0.8
2,373,760	+				+0.8
2,373,760	+				+0.8
2,373,760	+				-0.2
2,373,760	+				-0.2
2,373,761	+		Dsui_2232	0.38	-1.8
2,373,761	+				+0.8
2,373,761	+				-0.8
2,373,761	+				+0.8
2,373,761	+				+0.8
2,373,761	+		Dsui_2232	0.38	+0.8
2,373,761	+				-0.8
2,373,761	+		Dsui_2232	0.38	-0.8
2,373,761	+				-0.2
2,373,761	+		Dsui_2232	0.38	-0.8
2,373,761	+				-0.2
2,373,761	+				+0.8
2,373,768	+				+0.8
2,373,783	+				+0.8
2,373,783	+		Dsui_2232	0.40	+0.8
2,373,783	+		Dsui_2232	0.40	+0.8
2,373,783	+				-0.2
2,373,788	+		Dsui_2232	0.40	+0.2
2,373,788	+		Dsui_2232	0.40	+0.8
2,373,795	+				+0.8
2,373,795	+				-0.2
2,373,795	+		Dsui_2232	0.41	+0.8
2,373,817	+		Dsui_2232	0.43	+0.8
2,373,817	+				-0.8
2,373,824	+				+0.8
2,373,824	+		Dsui_2232	0.43	-2.0
2,373,824	+		Dsui_2232	0.43	+0.8
2,373,824	+		Dsui_2232	0.43	-1.2
2,373,824	+				-0.2
2,373,824	+				-0.2
2,373,824	+				-1.2
2,373,826	-				+0.8
2,373,832	-		Dsui_2232	0.44	+0.8
2,373,838	+				-0.2
2,373,845	+				+0.8
2,373,845	+				+0.8
2,373,854	+				+0.8
2,373,868	+				-0.2
2,373,877	-				+0.8
2,373,887	+				+0.8
2,373,912	+				+0.8
2,373,919	-				-0.2
2,373,921	+				+0.8
2,373,923	+				-0.8
2,373,971	+				-0.2
2,373,979	-				-0.8
2,373,998	-		Dsui_2232	0.58	-0.0
2,374,007	-				-0.8
2,374,021	+		Dsui_2232	0.59	-0.8
2,374,031	+				-0.8
2,374,035	+		Dsui_2232	0.61	+0.8
2,374,077	-				+0.8
2,374,077	-				-1.2
2,374,097	-				+0.8
2,374,102	-				+0.8
2,374,104	-		Dsui_2232	0.66	-0.8
2,374,104	-				+0.8
2,374,104	-		Dsui_2232	0.66	-1.2
2,374,111	-				+0.8
2,374,119	-				+0.8
2,374,121	-				+0.8
2,374,126	-		Dsui_2232	0.68	+0.8
2,374,126	-		Dsui_2232	0.68	-1.8
2,374,126	-				+0.8
2,374,126	-		Dsui_2232	0.68	-1.2
2,374,126	-		Dsui_2232	0.68	+0.8
2,374,126	-		Dsui_2232	0.68	-0.2
2,374,126	-		Dsui_2232	0.68	+0.8
2,374,126	-		Dsui_2232	0.68	+0.8
2,374,126	-		Dsui_2232	0.68	+0.8
2,374,126	-		Dsui_2232	0.68	-1.2
2,374,134	+		Dsui_2232	0.69	-0.2
2,374,135	-				-0.2
2,374,136	-				+0.8
2,374,142	-				-0.2
2,374,142	-				+0.8
2,374,142	-				+0.8
2,374,149	+		Dsui_2232	0.70	+0.8
2,374,149	-				+0.8
2,374,150	-				+0.8
2,374,157	-				-0.2
2,374,160	-				+0.8
2,374,212	-		Dsui_2232	0.75	-1.8
2,374,212	-				+0.8
2,374,212	-		Dsui_2232	0.75	-0.8
2,374,212	-				-0.2
2,374,212	-				+0.8
2,374,212	-				-0.2
2,374,212	-				+0.8
2,374,212	-				+0.8
2,374,212	-				-0.2
2,374,212	-				-0.2
2,374,212	-				+0.8
2,374,212	-				-0.2
2,374,212	-		Dsui_2232	0.75	-0.2
2,374,212	-				+0.8
2,374,212	-				+0.8
2,374,212	-				+0.8
2,374,212	-				+0.8
2,374,212	-		Dsui_2232	0.75	-0.8
2,374,212	-		Dsui_2232	0.75	-1.5
2,374,212	-				+0.8
2,374,212	-				+0.8
2,374,222	-		Dsui_2232	0.76	-0.8
2,374,234	-				-0.2
2,374,240	-		Dsui_2232	0.77	-0.2
2,374,296	-		Dsui_2232	0.82	-0.2
2,374,296	-		Dsui_2232	0.82	-1.2
2,374,296	-				+0.8
2,374,298	-		Dsui_2232	0.82	-0.2
2,374,298	-				-0.2
2,374,298	-				+0.8
2,374,298	-				+0.8
2,374,298	-				-1.2
2,374,298	-				-0.2
2,374,298	-		Dsui_2232	0.82	-1.5
2,374,298	-		Dsui_2232	0.82	+0.8
2,374,301	-		Dsui_2232	0.83	-1.2
2,374,301	-				+0.8
2,374,301	-				-0.8
2,374,303	-				+0.8
2,374,303	-				+0.8
2,374,303	-				+0.8
2,374,303	-		Dsui_2232	0.83	+0.8
2,374,306	-		Dsui_2232	0.83	-0.8
2,374,306	-				-0.8
2,374,306	-				+0.8
2,374,306	-				-0.2
2,374,306	-		Dsui_2232	0.83	-1.2
2,374,306	-				+0.8
2,374,306	-				+0.8
2,374,306	-				+0.8
2,374,306	-		Dsui_2232	0.83	-1.2
2,374,306	-		Dsui_2232	0.83	-0.2
2,374,311	+		Dsui_2232	0.83	-0.2
2,374,311	-				+0.8
2,374,311	-				-0.2
2,374,313	-		Dsui_2232	0.83	-1.5
2,374,319	-				+0.8
2,374,319	-				-0.8
2,374,322	-		Dsui_2232	0.84	+0.8
2,374,327	-				-0.2
2,374,342	-				-1.2
2,374,342	-		Dsui_2232	0.86	+0.8
2,374,342	-				+0.8
2,374,342	-		Dsui_2232	0.86	+0.8
2,374,342	-				+1.8
2,374,344	-		Dsui_2232	0.86	-0.8
2,374,344	-		Dsui_2232	0.86	-1.2
2,374,344	-				-0.2
2,374,346	-		Dsui_2232	0.86	+0.8
2,374,347	-				-0.2
2,374,369	-				+0.8
2,374,382	-				-0.2
2,374,388	-				+0.8
2,374,388	-		Dsui_2232	0.90	-0.2
2,374,389	-		Dsui_2232	0.90	-0.8
2,374,398	-				-0.2
2,374,399	-				-0.2
2,374,399	-				-1.2
2,374,399	-				-0.2
2,374,399	-				-1.2
2,374,399	-				+0.8
2,374,399	-				-0.2
2,374,400	-				+0.8
2,374,400	-				+0.8
2,374,420	-				+0.8
2,374,420	-				+0.8
2,374,433	-				+0.8
2,374,433	-				-1.2
2,374,433	-				-0.8
2,374,434	-				+0.8
2,374,444	-				-2.0
2,374,444	-				+0.8
2,374,444	-				-0.8
2,374,444	-				-1.2
2,374,444	-				-1.5
2,374,444	-				+0.8
2,374,444	-				-0.8
2,374,444	-				+0.8
2,374,444	-				-0.8
2,374,444	-				-0.2
2,374,444	-				+0.8
2,374,444	-				+0.8
2,374,444	-				-0.2
2,374,444	-				-0.8
2,374,444	-				-0.2
2,374,444	-				-1.2
2,374,444	-				-0.2
2,374,444	-				+0.8
2,374,444	-				-1.2
2,374,444	-				+0.8
2,374,444	-				+0.8
2,374,444	-				-0.8
2,374,444	-				+0.8
2,374,444	-				+0.8
2,374,444	-				+0.8
2,374,444	-				+0.8
2,374,444	-				+0.8
2,374,444	-				-0.2
2,374,444	-				-0.2
2,374,444	-				-2.4
2,374,444	-				+0.8
2,374,444	-				+0.8
2,374,444	-				-1.2
2,374,444	-				+0.8
2,374,444	-				+0.8
2,374,444	-				-0.8
2,374,444	-				-0.2
2,374,444	-				+0.8
2,374,444	-				-0.2
2,374,444	-				+0.8
2,374,446	-				-0.2
2,374,446	-				-0.8
2,374,453	-				+0.8
2,374,454	-				+0.8
2,374,455	-				-0.2
2,374,455	-				-0.2
2,374,463	-				+0.8
2,374,463	-				+0.8
2,374,464	-				-0.2
2,374,465	-				-1.2
2,374,465	-				+0.8
2,374,468	-				+0.8
2,374,473	-				-0.8
2,374,476	+				+0.5
2,374,476	+				+0.4
2,374,478	-				-1.2
2,374,484	-				+0.8
2,374,484	-				-0.8
2,374,484	-				+0.8
2,374,484	-				-0.2
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,484	-				-0.8
2,374,484	-				-1.8
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,484	-				-0.2
2,374,484	-				-1.2
2,374,484	-				-0.8
2,374,484	-				-1.2
2,374,484	-				-0.8
2,374,484	-				+0.8
2,374,484	-				-0.2
2,374,484	-				-0.2
2,374,484	-				-0.8
2,374,484	-				+0.8
2,374,484	-				-0.2
2,374,484	-				-1.5
2,374,484	-				-0.2
2,374,484	-				-0.2
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,484	-				-0.2
2,374,484	-				-0.2
2,374,484	-				+0.8
2,374,484	-				-0.2
2,374,484	-				+0.8
2,374,484	-				-2.0
2,374,484	-				+0.8
2,374,484	-				-0.2
2,374,484	-				-1.5
2,374,484	-				+0.8
2,374,484	-				-1.5
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,484	-				+0.8
2,374,494	-				-0.8
2,374,494	-				-0.8
2,374,502	-				+0.8
2,374,502	-				-1.2
2,374,502	-				+0.8
2,374,515	-				-0.8
2,374,515	-				-0.8
2,374,515	-				+0.8
2,374,515	-				+0.8
2,374,515	-				+0.8
2,374,515	-				-0.2
2,374,522	-				-0.8
2,374,522	-				-0.8
2,374,528	-				-0.2
2,374,531	-				-1.2
2,374,535	-				+0.8
2,374,535	-				+0.8
2,374,537	-				+0.8
2,374,542	-				-0.2
2,374,542	-				-0.8
2,374,549	-				-0.2
2,374,549	-				-0.2
2,374,549	-				+0.8
2,374,549	-				-0.2
2,374,549	-				+0.8
2,374,549	-				+0.8
2,374,549	-				+0.8
2,374,549	-				+0.8
2,374,549	-				-0.8
2,374,549	-				+0.8
2,374,549	-				+0.8
2,374,549	-				+0.8
2,374,549	-				-2.0
2,374,549	-				-2.5
2,374,556	-				+0.8
2,374,563	-				-0.2
2,374,568	-				+0.8
2,374,581	-				+0.8
2,374,583	+				+1.6
2,374,589	-				-0.2
2,374,589	-				+0.8
2,374,590	-				-0.2
2,374,594	-				+0.8
2,374,596	-				-0.8
2,374,600	-				-0.2
2,374,606	-				+0.8
2,374,606	-				+0.8
2,374,606	-				+0.8
2,374,606	-				+0.8
2,374,606	-				-0.2
2,374,606	-				+0.8
2,374,606	-				+0.8
2,374,606	-				-0.8
2,374,606	-				+0.8
2,374,606	-				-0.8
2,374,606	-				+0.8
2,374,606	-				-0.2
2,374,606	-				-0.2
2,374,606	-				-0.2
2,374,617	-				+0.8
2,374,617	-				-0.8
2,374,630	-				-0.2
2,374,653	-				+0.8
2,374,653	-				+0.8
2,374,653	-				-0.2
2,374,653	-				+0.8
2,374,659	-				-0.8
2,374,659	-				+0.8
2,374,671	-				+0.8
2,374,677	-				-0.2
2,374,682	-				+0.8
2,374,682	-				-0.2
2,374,682	-				+0.8
2,374,691	-				+0.8
2,374,692	-				+0.8
2,374,692	-				+0.8
2,374,692	-				+0.8
2,374,692	-				+0.8
2,374,692	-				+0.8
2,374,692	-				+0.8
2,374,692	-				-0.8
2,374,692	-				-0.2
2,374,692	-				+0.8
2,374,692	-				+0.8
2,374,692	-				-1.2
2,374,692	-				+0.8
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