Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_22910

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
5,025,912	+		AO353_22905	0.67	+0.6
5,025,912	+		AO353_22905	0.67	-1.5
5,025,913	-		AO353_22905	0.67	-2.1
5,025,936	-		AO353_22905	0.68	+0.6
5,025,956	+		AO353_22905	0.70	-0.1
5,025,956	+		AO353_22905	0.70	+1.3
5,025,956	+		AO353_22905	0.70	+0.6
5,025,957	-		AO353_22905	0.70	+0.8
5,025,963	+		AO353_22905	0.70	+0.7
5,025,963	+		AO353_22905	0.70	+0.1
5,025,963	+		AO353_22905	0.70	+0.1
5,025,964	-		AO353_22905	0.70	-0.2
5,025,964	-		AO353_22905	0.70	-0.4
5,025,964	-		AO353_22905	0.70	-0.8
5,025,964	-		AO353_22905	0.70	-2.4
5,025,964	-		AO353_22905	0.70	-0.6
5,025,969	-		AO353_22905	0.70	-0.5
5,026,003	+		AO353_22905	0.73	-1.2
5,026,141	-		AO353_22905	0.82	+0.1
5,026,236	+		AO353_22905	0.88	-0.2
5,026,237	-		AO353_22905	0.88	+0.2
5,026,305	-				-0.8
5,026,407	+				+0.6
5,026,407	+				-1.8
5,026,408	-				-0.9
5,026,584	+				-2.5
5,026,584	+				-2.8
5,026,585	-				-0.3
5,026,593	+				+1.1
5,026,594	-				-1.3
5,026,594	-				+1.3
5,026,681	-				-0.5
5,026,681	-				+1.2
5,026,757	+				+0.3
5,026,758	-				-0.5
5,026,761	+				-0.3
5,026,761	+				-1.1
5,026,762	-				+1.2
5,026,762	-				+2.2
5,026,762	-				+1.3
5,026,762	-				+0.2
5,026,812	+				-0.8
5,026,812	+				-0.4
5,026,812	+				+0.0
5,026,812	+				+0.2
5,026,812	+				+1.3
5,026,812	+				-2.3
5,026,812	+				-0.6
5,026,812	+				+1.1
5,026,813	-				+1.0
5,026,813	-				-1.0
5,026,813	-				-2.8
5,026,813	-				-0.9
5,026,813	-				+0.4
5,026,838	+				-3.4
5,027,048	+		AO353_22910	0.15	-1.1
5,027,112	+		AO353_22910	0.18	+0.3
5,027,112	+		AO353_22910	0.18	+0.6
5,027,112	+		AO353_22910	0.18	+0.1
5,027,113	-		AO353_22910	0.18	+0.5
5,027,113	-		AO353_22910	0.18	-0.8
5,027,154	+		AO353_22910	0.20	-0.4
5,027,251	-		AO353_22910	0.24	+0.3
5,027,251	-		AO353_22910	0.24	-0.0
5,027,254	+		AO353_22910	0.24	+0.7
5,027,255	-		AO353_22910	0.24	-0.1
5,027,313	+		AO353_22910	0.27	+0.2
5,027,314	-		AO353_22910	0.27	-0.6
5,027,314	-		AO353_22910	0.27	-1.0
5,027,352	+				+1.2
5,027,352	+		AO353_22910	0.29	+1.2
5,027,352	+				+0.8
5,027,352	+		AO353_22910	0.29	-0.3
5,027,352	+		AO353_22910	0.29	+1.6
5,027,353	-		AO353_22910	0.29	+0.1
5,027,353	-		AO353_22910	0.29	-0.0
5,027,353	-		AO353_22910	0.29	+1.3
5,027,569	+		AO353_22910	0.40	+1.2
5,027,569	+		AO353_22910	0.40	+1.3
5,027,569	+		AO353_22910	0.40	+0.4
5,027,570	-		AO353_22910	0.40	-0.2
5,027,570	-		AO353_22910	0.40	+2.7
5,027,690	+		AO353_22910	0.45	+0.6
5,027,690	+		AO353_22910	0.45	+1.1
5,027,690	+		AO353_22910	0.45	-0.3
5,027,690	+		AO353_22910	0.45	-0.4
5,027,690	+		AO353_22910	0.45	-0.0
5,027,691	-		AO353_22910	0.45	-1.1
5,027,691	-		AO353_22910	0.45	+0.5
5,027,691	-		AO353_22910	0.45	-0.7
5,027,691	-		AO353_22910	0.45	-0.6
5,027,692	+		AO353_22910	0.45	-0.2
5,027,692	+		AO353_22910	0.45	+0.2
5,027,692	+		AO353_22910	0.45	+0.2
5,027,692	+		AO353_22910	0.45	-1.0
5,027,692	+		AO353_22910	0.45	+0.2
5,027,692	+		AO353_22910	0.45	-0.1
5,027,692	+		AO353_22910	0.45	+0.9
5,027,692	+		AO353_22910	0.45	+0.5
5,027,693	-		AO353_22910	0.45	+0.4
5,027,693	-		AO353_22910	0.45	+1.3
5,027,693	-		AO353_22910	0.45	-1.9
5,027,693	-		AO353_22910	0.45	-1.9
5,027,693	-		AO353_22910	0.45	+0.9
5,027,693	-		AO353_22910	0.45	+1.2
5,027,693	-		AO353_22910	0.45	-1.8
5,027,693	-		AO353_22910	0.45	-0.8
5,027,722	+		AO353_22910	0.47	-0.6
5,027,794	+		AO353_22910	0.50	+0.8
5,027,794	+		AO353_22910	0.50	+2.0
5,027,795	-		AO353_22910	0.50	-0.8
5,027,795	-		AO353_22910	0.50	-0.7
5,027,914	+		AO353_22910	0.56	+0.5
5,027,973	+		AO353_22910	0.59	-0.4
5,027,973	+		AO353_22910	0.59	+0.5
5,027,974	-		AO353_22910	0.59	-0.5
5,027,974	-		AO353_22910	0.59	+0.9
5,027,974	-		AO353_22910	0.59	+1.5
5,027,974	-		AO353_22910	0.59	-0.3
5,027,974	-		AO353_22910	0.59	-0.4
5,027,974	-		AO353_22910	0.59	-0.0
5,027,974	-		AO353_22910	0.59	-1.7
5,028,029	+		AO353_22910	0.62	-0.4
5,028,030	-		AO353_22910	0.62	-0.8
5,028,105	+		AO353_22910	0.65	+0.8
5,028,106	-		AO353_22910	0.65	+1.2
5,028,106	-		AO353_22910	0.65	+0.2
5,028,106	-		AO353_22910	0.65	-0.7
5,028,106	-		AO353_22910	0.65	+0.1
5,028,303	+		AO353_22910	0.75	+0.6
5,028,304	-		AO353_22910	0.75	+1.2
5,028,317	+		AO353_22910	0.75	+0.3
5,028,317	+		AO353_22910	0.75	+0.2
5,028,318	-		AO353_22910	0.76	+0.8
5,028,546	+		AO353_22910	0.86	-0.4
5,028,546	+		AO353_22910	0.86	-1.2
5,028,547	-		AO353_22910	0.87	+0.6
5,028,547	-		AO353_22910	0.87	-0.5
5,028,547	-		AO353_22910	0.87	+1.2
5,028,727	+				+0.3
5,028,727	+				+1.1
5,028,728	-				-2.6
5,028,728	-				-0.2
5,028,796	+				-0.1
5,028,796	+				+0.6
5,028,796	+				+0.3
5,028,796	+				-0.3
5,028,797	-				-1.5
5,028,797	-				-0.3
5,028,797	-				-1.7
5,028,797	-				+0.6
5,028,797	-				-0.0
5,028,797	-				+1.3
5,029,000	-				-2.2
5,029,094	+				-0.3
5,029,094	+				+0.2
5,029,094	+				-1.3
5,029,095	-				+0.6
5,029,095	-				-1.2
5,029,095	-				-0.7
5,029,140	+		AO353_22915	0.13	-0.0
5,029,141	-		AO353_22915	0.13	-1.1
5,029,503	+		AO353_22915	0.61	+0.6
5,029,503	+		AO353_22915	0.61	+0.2
5,029,504	-		AO353_22915	0.62	-0.8
5,029,504	-		AO353_22915	0.62	+1.0
5,029,614	+		AO353_22915	0.76	-0.4
5,029,614	+		AO353_22915	0.76	-0.8
5,029,614	+		AO353_22915	0.76	-1.6
5,029,614	+		AO353_22915	0.76	+0.4
5,029,615	-				+0.6
5,029,615	-		AO353_22915	0.76	+0.3
5,029,615	-		AO353_22915	0.76	+2.1
5,029,615	-		AO353_22915	0.76	+0.2
5,029,615	-		AO353_22915	0.76	+0.1
5,029,615	-		AO353_22915	0.76	-0.6
5,029,722	-				+1.2
5,029,749	+				-1.4
5,029,749	+				+0.1
5,029,750	-				-0.4
5,029,788	+				+0.3
5,029,811	+				+0.8