Strain Fitness in Pseudomonas fluorescens FW300-N2E3 around AO353_21060

Experiment: butyrate (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	butyrate (C)
4,602,474	+		AO353_21055	0.19	+2.5
4,602,474	+		AO353_21055	0.19	+1.3
4,602,474	+		AO353_21055	0.19	+3.4
4,602,475	-		AO353_21055	0.19	-1.5
4,602,804	+		AO353_21055	0.49	+2.1
4,602,805	-		AO353_21055	0.50	+1.1
4,602,805	-		AO353_21055	0.50	+0.1
4,602,878	+		AO353_21055	0.56	+1.7
4,602,936	+		AO353_21055	0.62	+1.5
4,602,936	+		AO353_21055	0.62	-0.4
4,602,937	-		AO353_21055	0.62	+0.0
4,602,937	-		AO353_21055	0.62	-0.4
4,602,937	-		AO353_21055	0.62	+1.0
4,603,012	-		AO353_21055	0.69	+0.2
4,603,177	-		AO353_21055	0.84	+0.3
4,603,344	+				+3.5
4,603,345	-				+0.8
4,603,525	+				+3.5
4,603,525	+				+2.6
4,603,525	+				+2.7
4,603,526	-				+1.1
4,603,526	-				+1.4
4,603,526	-				-0.6
4,603,526	-				+1.2
4,603,526	-				+1.4
4,603,526	-				+0.1
4,603,591	+				+1.7
4,603,591	+				+0.6
4,603,591	+				+3.2
4,603,591	+				+2.2
4,603,592	-				-1.2
4,603,592	-				+0.3
4,603,592	-				-0.6
4,603,592	-				+0.8
4,603,592	-				+1.2
4,603,592	-				-0.2
4,603,592	-				+0.2
4,603,592	-				+0.1
4,603,592	-				+0.4
4,603,592	-				-0.5
4,603,593	+				+2.7
4,603,677	+		AO353_21060	0.12	+2.8
4,603,678	-		AO353_21060	0.12	+0.3
4,603,843	+		AO353_21060	0.18	+2.6
4,603,843	+		AO353_21060	0.18	+3.3
4,603,844	-		AO353_21060	0.18	-0.6
4,603,865	+		AO353_21060	0.19	+2.6
4,603,866	-		AO353_21060	0.19	-0.2
4,603,866	-		AO353_21060	0.19	+0.4
4,603,866	-		AO353_21060	0.19	-0.7
4,603,866	-		AO353_21060	0.19	+1.0
4,603,866	-		AO353_21060	0.19	+0.6
4,603,994	-		AO353_21060	0.24	+0.5
4,603,994	-		AO353_21060	0.24	+1.5
4,603,994	-		AO353_21060	0.24	-0.0
4,604,095	+		AO353_21060	0.28	+2.7
4,604,095	+		AO353_21060	0.28	+3.4
4,604,095	+		AO353_21060	0.28	+2.0
4,604,095	+		AO353_21060	0.28	+1.0
4,604,096	-		AO353_21060	0.28	+0.3
4,604,096	-		AO353_21060	0.28	+1.1
4,604,096	-		AO353_21060	0.28	-2.1
4,604,202	+		AO353_21060	0.33	+1.0
4,604,213	-		AO353_21060	0.33	+0.6
4,604,435	-		AO353_21060	0.42	-0.2
4,604,577	+		AO353_21060	0.47	+2.8
4,604,577	+		AO353_21060	0.47	+2.2
4,604,577	+		AO353_21060	0.47	+2.0
4,604,611	+		AO353_21060	0.49	+2.9
4,604,612	-		AO353_21060	0.49	-0.6
4,604,612	-		AO353_21060	0.49	+0.6
4,604,612	-		AO353_21060	0.49	+0.8
4,604,612	-		AO353_21060	0.49	+0.3
4,604,849	-				+1.3
4,604,849	-		AO353_21060	0.58	-0.7
4,604,850	+		AO353_21060	0.58	+1.7
4,604,851	-		AO353_21060	0.58	-0.7
4,604,866	+		AO353_21060	0.59	+1.1
4,604,867	-		AO353_21060	0.59	+0.5
4,604,867	-		AO353_21060	0.59	-1.3
4,604,867	-		AO353_21060	0.59	+0.7
4,604,867	-		AO353_21060	0.59	-0.8
4,604,882	-		AO353_21060	0.59	-0.7
4,604,944	+		AO353_21060	0.62	+1.1
4,604,944	+		AO353_21060	0.62	+2.2
4,604,944	+		AO353_21060	0.62	+1.1
4,604,944	+		AO353_21060	0.62	+3.0
4,604,944	+		AO353_21060	0.62	+2.8
4,604,944	+		AO353_21060	0.62	+2.7
4,604,945	-		AO353_21060	0.62	-0.0
4,604,945	-		AO353_21060	0.62	-0.3
4,604,945	-		AO353_21060	0.62	-0.7
4,604,945	-		AO353_21060	0.62	-0.7
4,604,945	-		AO353_21060	0.62	+0.9
4,604,945	-		AO353_21060	0.62	+0.9
4,604,946	+		AO353_21060	0.62	+1.9
4,604,946	+		AO353_21060	0.62	+1.7
4,604,947	-		AO353_21060	0.62	-0.1
4,604,947	-		AO353_21060	0.62	-0.2
4,604,947	-		AO353_21060	0.62	-0.1
4,604,947	-		AO353_21060	0.62	+0.1
4,604,947	-		AO353_21060	0.62	+0.7
4,604,947	-		AO353_21060	0.62	-0.4
4,604,947	-		AO353_21060	0.62	+0.8
4,605,055	+		AO353_21060	0.66	+3.4
4,605,055	+		AO353_21060	0.66	+3.4
4,605,056	-		AO353_21060	0.66	-0.8
4,605,056	-		AO353_21060	0.66	+1.0
4,605,056	-		AO353_21060	0.66	+2.4
4,605,056	-		AO353_21060	0.66	+1.0
4,605,082	-		AO353_21060	0.67	-0.3
4,605,109	+		AO353_21060	0.68	+1.0
4,605,109	+		AO353_21060	0.68	+3.4
4,605,110	-		AO353_21060	0.68	-0.2
4,605,355	+		AO353_21060	0.78	+1.4
4,605,355	+		AO353_21060	0.78	+1.7
4,605,355	+		AO353_21060	0.78	+1.9
4,605,355	+		AO353_21060	0.78	+5.4
4,605,356	-		AO353_21060	0.78	+0.5
4,605,356	-		AO353_21060	0.78	+0.2
4,605,362	-		AO353_21060	0.78	-0.0
4,605,362	-		AO353_21060	0.78	+0.2
4,605,362	-		AO353_21060	0.78	+0.7
4,605,541	+		AO353_21060	0.85	+1.7
4,605,541	+		AO353_21060	0.85	+2.4
4,605,542	-		AO353_21060	0.85	+1.1
4,605,550	+		AO353_21060	0.86	+2.4
4,605,550	+		AO353_21060	0.86	+1.9
4,605,551	-		AO353_21060	0.86	+0.2
4,605,551	-		AO353_21060	0.86	+1.0
4,605,551	-		AO353_21060	0.86	+0.6
4,605,551	-		AO353_21060	0.86	-1.1
4,605,551	-		AO353_21060	0.86	-0.6
4,605,551	-		AO353_21060	0.86	+0.3
4,605,575	-		AO353_21060	0.87	+0.9
4,605,575	-		AO353_21060	0.87	-0.2
4,605,608	-		AO353_21060	0.88	-0.2
4,605,674	+				+1.3
4,605,675	-				+1.2
4,605,675	-				+1.5
4,605,788	-				-0.9
4,605,900	+				+2.2
4,605,901	-				+0.3
4,605,910	+				-1.5
4,605,910	+				+1.0
4,605,910	+				-0.8
4,605,990	+				+0.4
4,606,169	+		AO353_21065	0.14	-1.1
4,606,370	+		AO353_21065	0.25	-2.1
4,606,385	+		AO353_21065	0.26	+0.1
4,606,385	+		AO353_21065	0.26	-0.3
4,606,385	+		AO353_21065	0.26	+0.0
4,606,385	+		AO353_21065	0.26	-0.6
4,606,385	+		AO353_21065	0.26	+1.7
4,606,386	-		AO353_21065	0.26	-0.8
4,606,386	-		AO353_21065	0.26	+1.2
4,606,386	-		AO353_21065	0.26	-0.8
4,606,386	-		AO353_21065	0.26	+1.7
4,606,386	-		AO353_21065	0.26	+0.2
4,606,386	-		AO353_21065	0.26	-2.2
4,606,600	+		AO353_21065	0.38	-0.3
4,606,600	+		AO353_21065	0.38	+0.1
4,606,626	+		AO353_21065	0.40	-0.1
4,606,626	+		AO353_21065	0.40	+0.4
4,606,626	+		AO353_21065	0.40	+0.2
4,606,626	+		AO353_21065	0.40	+0.1
4,606,802	+		AO353_21065	0.50	-0.7
4,606,802	+		AO353_21065	0.50	-0.1
4,606,803	-		AO353_21065	0.50	-0.2
4,606,803	-		AO353_21065	0.50	-1.0
4,606,803	-		AO353_21065	0.50	+0.3
4,606,803	-		AO353_21065	0.50	+0.2
4,606,854	-		AO353_21065	0.53	-0.0
4,606,872	-		AO353_21065	0.54	-0.6
4,606,872	-		AO353_21065	0.54	-0.1